FFCP PHASE1:Mm9::chr7:148648620..148648622,+: Difference between revisions
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{{FFCP|EntrezGene=213573|HGNC=|MCL_coexpression_id=239|UniProt=E9PXF1|association_with_transcript=-387bp_to_ENSMUST00000172215_5end|description=CAGE_peak_12_at_Efcab4a_5end|id=chr7:148648620..148648622,+|ontology_enrichment_celltype=CL:0000181!1.89e-07!5;CL:0000417!1.89e-07!5;CL:0000668!1.89e-07!5;CL:0000412!1.89e-07!5;CL:0000182!1.89e-07!5|ontology_enrichment_celltype_v019_2=CL:0000182,2.00e-25,5;CL:0002194,5.34e-12,4;CL:0000766,5.34e-12,4;CL:0000234,5.34e-12,4;CL:0000576,5.34e-12,4;CL:0000235,5.34e-12,4;CL:0000864,5.34e-12,4;CL:0002009,5.34e-12,4;CL:0000040,5.34e-12,4;CL:0000559,5.34e-12,4;CL:0002320,9.11e-12,46;CL:0000134,9.11e-12,46;CL:0000878,6.92e-11,2;CL:0000129,6.92e-11,2;CL:0000219,8.85e-10,54;CL:0002092,1.92e-07,3;CL:0002540,1.92e-07,3;CL:0000473,4.63e-07,7;CL:0000557,4.63e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.86e-13!22;UBERON:0007499!2.86e-13!22;UBERON:0006925!2.86e-13!22;UBERON:0009497!2.86e-13!22;UBERON:0000015!2.86e-13!22;UBERON:0002423!2.86e-13!22;UBERON:0006235!2.86e-13!22;UBERON:0008835!2.86e-13!22;UBERON:0003894!2.86e-13!22;UBERON:0004161!2.86e-13!22;UBERON:0008836!2.86e-13!22;UBERON:0002365!1.62e-12!25;UBERON:0002330!1.62e-12!25;UBERON:0009854!1.95e-12!23;UBERON:0009856!1.95e-12!23;UBERON:0000025!1.08e-09!114;UBERON:0004111!3.42e-08!122;UBERON:0003914!1.39e-07!47;UBERON:0003076!2.66e-07!12;UBERON:0003057!2.66e-07!12;UBERON:0005172!4.41e-07!49;UBERON:0005173!4.41e-07!49;UBERON:0002417!4.41e-07!49;UBERON:0000916!4.41e-07!49;UBERON:0005256!7.89e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.34e-31,22;UBERON:0007499,8.34e-31,22;UBERON:0006925,8.34e-31,22;UBERON:0009497,8.34e-31,22;UBERON:0000015,8.34e-31,22;UBERON:0002423,8.34e-31,22;UBERON:0006235,8.34e-31,22;UBERON:0008835,8.34e-31,22;UBERON:0003894,8.34e-31,22;UBERON:0004161,8.34e-31,22;UBERON:0008836,8.34e-31,22;UBERON:0009854,2.15e-29,23;UBERON:0009856,2.15e-29,23;UBERON:0002365,6.53e-27,25;UBERON:0002330,6.53e-27,25;UBERON:0005256,3.47e-14,45;UBERON:0003914,1.66e-13,47;UBERON:0005172,6.98e-13,49;UBERON:0005173,6.98e-13,49;UBERON:0002417,6.98e-13,49;UBERON:0000916,6.98e-13,49;UBERON:0002384,9.11e-12,46;UBERON:0003929,2.79e-11,55;UBERON:0002368,3.44e-10,60;UBERON:0003104,5.42e-10,61;UBERON:0009142,5.42e-10,61;UBERON:0002530,2.89e-09,65;UBERON:0000490,4.26e-09,66;UBERON:0009569,4.26e-09,66;UBERON:0005911,1.27e-08,69;UBERON:0000949,3.48e-08,72;UBERON:0002371,1.07e-07,16;UBERON:0005177,2.70e-07,79;UBERON:0001041,3.51e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0.65407546914134,0,0.388859798148567,0.279972843250725,0,0.503347818173209,0,0,0,0,0,0,0,0.633831403506179,0,0,4.94944844504769,0,1.4209602298922,2.09720077362883,3.07374644257244,0,0,0,0.571301968807607,0.883474163806454,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,1.12552522006336,0.45839474333043,0.294628585473668,0.284743361598206,0.186399445825301,0,0.151143120213571,2.6087803983151,27.5335640634044,10.1995700056163,1.61910957491345,7.14754059192436,7.6164570806547,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0.433798070759735,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0.898743836428936,0,0,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0.101839363850316,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,2.37162101669719,0,0.196558995113203,0,0.405720242777006,0,0,0.287696137450811,0.162135226775035,1.64736847912849,0,1.48856379067401,1.24815069245824,0.757736633841335,2.15276896226295,2.41221760681684,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,9.04747703635634,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0.294397840268795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p12@Efcab4a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=213573 | |||
|HGNC= | |||
|MCL_coexpression_id=239 | |||
|TSSclassifier=NA | |||
|UniProt=E9PXF1 | |||
|association_with_transcript=-387bp_to_ENSMUST00000172215_5end | |||
|cluster_id=chr7:148648620..148648622,+ | |||
|description=CAGE_peak_12_at_Efcab4a_5end | |||
|id=chr7:148648620..148648622,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.89e-07!5;CL:0000417!1.89e-07!5;CL:0000668!1.89e-07!5;CL:0000412!1.89e-07!5;CL:0000182!1.89e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.00e-25,5;CL:0002194,5.34e-12,4;CL:0000766,5.34e-12,4;CL:0000234,5.34e-12,4;CL:0000576,5.34e-12,4;CL:0000235,5.34e-12,4;CL:0000864,5.34e-12,4;CL:0002009,5.34e-12,4;CL:0000040,5.34e-12,4;CL:0000559,5.34e-12,4;CL:0002320,9.11e-12,46;CL:0000134,9.11e-12,46;CL:0000878,6.92e-11,2;CL:0000129,6.92e-11,2;CL:0000219,8.85e-10,54;CL:0002092,1.92e-07,3;CL:0002540,1.92e-07,3;CL:0000473,4.63e-07,7;CL:0000557,4.63e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.86e-13!22;UBERON:0007499!2.86e-13!22;UBERON:0006925!2.86e-13!22;UBERON:0009497!2.86e-13!22;UBERON:0000015!2.86e-13!22;UBERON:0002423!2.86e-13!22;UBERON:0006235!2.86e-13!22;UBERON:0008835!2.86e-13!22;UBERON:0003894!2.86e-13!22;UBERON:0004161!2.86e-13!22;UBERON:0008836!2.86e-13!22;UBERON:0002365!1.62e-12!25;UBERON:0002330!1.62e-12!25;UBERON:0009854!1.95e-12!23;UBERON:0009856!1.95e-12!23;UBERON:0000025!1.08e-09!114;UBERON:0004111!3.42e-08!122;UBERON:0003914!1.39e-07!47;UBERON:0003076!2.66e-07!12;UBERON:0003057!2.66e-07!12;UBERON:0005172!4.41e-07!49;UBERON:0005173!4.41e-07!49;UBERON:0002417!4.41e-07!49;UBERON:0000916!4.41e-07!49;UBERON:0005256!7.89e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.34e-31,22;UBERON:0007499,8.34e-31,22;UBERON:0006925,8.34e-31,22;UBERON:0009497,8.34e-31,22;UBERON:0000015,8.34e-31,22;UBERON:0002423,8.34e-31,22;UBERON:0006235,8.34e-31,22;UBERON:0008835,8.34e-31,22;UBERON:0003894,8.34e-31,22;UBERON:0004161,8.34e-31,22;UBERON:0008836,8.34e-31,22;UBERON:0009854,2.15e-29,23;UBERON:0009856,2.15e-29,23;UBERON:0002365,6.53e-27,25;UBERON:0002330,6.53e-27,25;UBERON:0005256,3.47e-14,45;UBERON:0003914,1.66e-13,47;UBERON:0005172,6.98e-13,49;UBERON:0005173,6.98e-13,49;UBERON:0002417,6.98e-13,49;UBERON:0000916,6.98e-13,49;UBERON:0002384,9.11e-12,46;UBERON:0003929,2.79e-11,55;UBERON:0002368,3.44e-10,60;UBERON:0003104,5.42e-10,61;UBERON:0009142,5.42e-10,61;UBERON:0002530,2.89e-09,65;UBERON:0000490,4.26e-09,66;UBERON:0009569,4.26e-09,66;UBERON:0005911,1.27e-08,69;UBERON:0000949,3.48e-08,72;UBERON:0002371,1.07e-07,16;UBERON:0005177,2.70e-07,79;UBERON:0001041,3.51e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0.65407546914134,0,0.388859798148567,0.279972843250725,0,0.503347818173209,0,0,0,0,0,0,0,0.633831403506179,0,0,4.94944844504769,0,1.4209602298922,2.09720077362883,3.07374644257244,0,0,0,0.571301968807607,0.883474163806454,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,1.12552522006336,0.45839474333043,0.294628585473668,0.284743361598206,0.186399445825301,0,0.151143120213571,2.6087803983151,27.5335640634044,10.1995700056163,1.61910957491345,7.14754059192436,7.6164570806547,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0.433798070759735,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0.898743836428936,0,0,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0.101839363850316,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,2.37162101669719,0,0.196558995113203,0,0.405720242777006,0,0,0.287696137450811,0.162135226775035,1.64736847912849,0,1.48856379067401,1.24815069245824,0.757736633841335,2.15276896226295,2.41221760681684,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,9.04747703635634,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0.294397840268795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p12@Efcab4a | |||
}} |
Latest revision as of 04:05, 26 September 2015
Short description: | p12@Efcab4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Efcab4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:239 |
Association with transcript: | -387bp_to_ENSMUST00000172215_5end |
EntrezGene: | Efcab4a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.00e-25 | 5 |
monopoietic cell | 5.34e-12 | 4 |
myeloid leukocyte | 5.34e-12 | 4 |
phagocyte | 5.34e-12 | 4 |
monocyte | 5.34e-12 | 4 |
macrophage | 5.34e-12 | 4 |
tissue-resident macrophage | 5.34e-12 | 4 |
macrophage dendritic cell progenitor | 5.34e-12 | 4 |
monoblast | 5.34e-12 | 4 |
promonocyte | 5.34e-12 | 4 |
connective tissue cell | 9.11e-12 | 46 |
mesenchymal cell | 9.11e-12 | 46 |
central nervous system macrophage | 6.92e-11 | 2 |
microglial cell | 6.92e-11 | 2 |
motile cell | 8.85e-10 | 54 |
bone marrow cell | 1.92e-07 | 3 |
mesenchymal stem cell of the bone marrow | 1.92e-07 | 3 |
defensive cell | 4.63e-07 | 7 |
granulocyte monocyte progenitor cell | 4.63e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
liver | 8.34e-31 | 22 |
epithelial sac | 8.34e-31 | 22 |
digestive gland | 8.34e-31 | 22 |
epithelium of foregut-midgut junction | 8.34e-31 | 22 |
anatomical boundary | 8.34e-31 | 22 |
hepatobiliary system | 8.34e-31 | 22 |
foregut-midgut junction | 8.34e-31 | 22 |
hepatic diverticulum | 8.34e-31 | 22 |
liver primordium | 8.34e-31 | 22 |
septum transversum | 8.34e-31 | 22 |
liver bud | 8.34e-31 | 22 |
digestive tract diverticulum | 2.15e-29 | 23 |
sac | 2.15e-29 | 23 |
exocrine gland | 6.53e-27 | 25 |
exocrine system | 6.53e-27 | 25 |
trunk mesenchyme | 3.47e-14 | 45 |
epithelial tube | 1.66e-13 | 47 |
abdomen element | 6.98e-13 | 49 |
abdominal segment element | 6.98e-13 | 49 |
abdominal segment of trunk | 6.98e-13 | 49 |
abdomen | 6.98e-13 | 49 |
connective tissue | 9.11e-12 | 46 |
gut epithelium | 2.79e-11 | 55 |
endocrine gland | 3.44e-10 | 60 |
mesenchyme | 5.42e-10 | 61 |
entire embryonic mesenchyme | 5.42e-10 | 61 |
gland | 2.89e-09 | 65 |
unilaminar epithelium | 4.26e-09 | 66 |
subdivision of trunk | 4.26e-09 | 66 |
endo-epithelium | 1.27e-08 | 69 |
endocrine system | 3.48e-08 | 72 |
bone marrow | 1.07e-07 | 16 |
trunk region element | 2.70e-07 | 79 |
foregut | 3.51e-07 | 80 |