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FFCP PHASE1:Mm9::chr5:71486979..71486997,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14395
|EntrezGene=14395
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P26048,Q544G1
|UniProt=P26048,Q544G1
|association_with_transcript=90bp_to_ENSMUST00000000572,NM_008066,uc008xqw.1,uc012dww.1_5end
|association_with_transcript=90bp_to_ENSMUST00000000572,NM_008066,uc008xqw.1,uc012dww.1_5end
|cluster_id=chr5:71486979..71486997,-
|description=CAGE_peak_2_at_Gabra2_5end
|description=CAGE_peak_2_at_Gabra2_5end
|id=chr5:71486979..71486997,-
|id=chr5:71486979..71486997,-
|ontology_enrichment_celltype=CL:0000117!6.71e-15!23;CL:0000337!6.71e-15!23;CL:0000540!1.94e-09!33;CL:0000047!1.94e-09!33;CL:0000031!1.94e-09!33;CL:0000404!1.94e-09!33;CL:0000393!8.58e-07!39;CL:0000211!8.58e-07!39;CL:0002319!9.38e-07!43
|ontology_enrichment_celltype=CL:0000117!6.71e-15!23;CL:0000337!6.71e-15!23;CL:0000540!1.94e-09!33;CL:0000047!1.94e-09!33;CL:0000031!1.94e-09!33;CL:0000404!1.94e-09!33;CL:0000393!8.58e-07!39;CL:0000211!8.58e-07!39;CL:0002319!9.38e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,3.42e-16,23;CL:0000337,3.42e-16,23;CL:0000540,7.06e-10,33;CL:0000047,7.06e-10,33;CL:0000031,7.06e-10,33;CL:0000404,7.06e-10,33;CL:0000393,1.10e-07,39;CL:0000211,1.10e-07,39;CL:0002319,2.07e-07,43;CL:0000221,3.84e-07,44;CL:0000133,3.84e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.41e-25!52;UBERON:0005068!2.41e-25!52;UBERON:0006241!2.41e-25!52;UBERON:0007135!2.41e-25!52;UBERON:0000073!4.48e-24!75;UBERON:0001016!4.48e-24!75;UBERON:0000955!7.16e-24!50;UBERON:0006238!7.16e-24!50;UBERON:0000033!2.23e-23!63;UBERON:0001017!3.98e-23!73;UBERON:0005743!3.98e-23!73;UBERON:0002616!6.04e-23!49;UBERON:0002346!8.28e-23!71;UBERON:0003075!8.28e-23!71;UBERON:0007284!8.28e-23!71;UBERON:0002020!3.23e-21!34;UBERON:0003056!6.33e-21!49;UBERON:0004121!2.03e-20!102;UBERON:0000924!2.03e-20!102;UBERON:0006601!2.03e-20!102;UBERON:0003080!1.07e-18!40;UBERON:0002780!6.56e-18!39;UBERON:0001890!6.56e-18!39;UBERON:0006240!6.56e-18!39;UBERON:0002791!4.65e-17!29;UBERON:0003528!4.65e-17!29;UBERON:0001893!4.65e-17!29;UBERON:0007811!7.59e-13!86;UBERON:0000153!1.99e-11!94;UBERON:0000956!2.21e-11!21;UBERON:0001869!2.21e-11!21;UBERON:0000203!2.21e-11!21;UBERON:0002021!2.46e-10!10;UBERON:0000411!2.46e-10!10;UBERON:0001950!2.46e-10!10;UBERON:0002619!1.75e-09!17;UBERON:0003076!3.32e-07!12;UBERON:0003057!3.32e-07!12;UBERON:0002420!5.00e-07!8;UBERON:0007245!5.00e-07!8;UBERON:0010009!5.00e-07!8;UBERON:0010011!5.00e-07!8;UBERON:0000454!5.00e-07!8
|ontology_enrichment_uberon=UBERON:0001049!2.41e-25!52;UBERON:0005068!2.41e-25!52;UBERON:0006241!2.41e-25!52;UBERON:0007135!2.41e-25!52;UBERON:0000073!4.48e-24!75;UBERON:0001016!4.48e-24!75;UBERON:0000955!7.16e-24!50;UBERON:0006238!7.16e-24!50;UBERON:0000033!2.23e-23!63;UBERON:0001017!3.98e-23!73;UBERON:0005743!3.98e-23!73;UBERON:0002616!6.04e-23!49;UBERON:0002346!8.28e-23!71;UBERON:0003075!8.28e-23!71;UBERON:0007284!8.28e-23!71;UBERON:0002020!3.23e-21!34;UBERON:0003056!6.33e-21!49;UBERON:0004121!2.03e-20!102;UBERON:0000924!2.03e-20!102;UBERON:0006601!2.03e-20!102;UBERON:0003080!1.07e-18!40;UBERON:0002780!6.56e-18!39;UBERON:0001890!6.56e-18!39;UBERON:0006240!6.56e-18!39;UBERON:0002791!4.65e-17!29;UBERON:0003528!4.65e-17!29;UBERON:0001893!4.65e-17!29;UBERON:0007811!7.59e-13!86;UBERON:0000153!1.99e-11!94;UBERON:0000956!2.21e-11!21;UBERON:0001869!2.21e-11!21;UBERON:0000203!2.21e-11!21;UBERON:0002021!2.46e-10!10;UBERON:0000411!2.46e-10!10;UBERON:0001950!2.46e-10!10;UBERON:0002619!1.75e-09!17;UBERON:0003076!3.32e-07!12;UBERON:0003057!3.32e-07!12;UBERON:0002420!5.00e-07!8;UBERON:0007245!5.00e-07!8;UBERON:0010009!5.00e-07!8;UBERON:0010011!5.00e-07!8;UBERON:0000454!5.00e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.79e-34,54;UBERON:0001049,4.99e-31,52;UBERON:0005068,4.99e-31,52;UBERON:0006241,4.99e-31,52;UBERON:0007135,4.99e-31,52;UBERON:0002346,9.90e-30,64;UBERON:0003075,9.90e-30,64;UBERON:0007284,9.90e-30,64;UBERON:0001016,2.04e-29,75;UBERON:0001017,4.71e-29,73;UBERON:0002020,2.55e-27,34;UBERON:0004121,5.83e-26,95;UBERON:0000924,5.83e-26,95;UBERON:0006601,5.83e-26,95;UBERON:0010371,1.05e-24,73;UBERON:0000955,1.81e-24,47;UBERON:0006238,1.81e-24,47;UBERON:0002616,4.08e-23,46;UBERON:0003056,1.12e-20,49;UBERON:0003528,1.14e-20,29;UBERON:0002791,1.14e-20,29;UBERON:0001893,1.14e-20,29;UBERON:0003080,6.98e-20,40;UBERON:0002780,1.03e-18,39;UBERON:0001890,1.03e-18,39;UBERON:0006240,1.03e-18,39;UBERON:0010314,2.32e-17,92;UBERON:0002021,1.80e-16,10;UBERON:0000411,1.80e-16,10;UBERON:0001950,1.80e-16,10;UBERON:0002619,1.04e-14,17;UBERON:0000956,3.20e-13,21;UBERON:0001869,3.20e-13,21;UBERON:0000203,3.20e-13,21;UBERON:0003076,6.15e-12,12;UBERON:0003057,6.15e-12,12;UBERON:0002240,6.96e-10,6;UBERON:0005174,6.96e-10,6;UBERON:0001137,6.96e-10,6;UBERON:0002420,7.44e-09,8;UBERON:0007245,7.44e-09,8;UBERON:0010009,7.44e-09,8;UBERON:0010011,7.44e-09,8;UBERON:0000454,7.44e-09,8;UBERON:0000025,7.76e-09,114;UBERON:0001948,3.02e-08,5;UBERON:0002315,3.02e-08,5;UBERON:0004111,1.15e-07,122;UBERON:0002950,3.13e-07,4;UBERON:0001891,3.13e-07,4;UBERON:0009616,3.13e-07,4;UBERON:0010286,3.13e-07,4
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,3.1739458756322,1.90149421051854,0,0,0,0,0,0,0,0.311068836925433,0.675029691658453,0.630974884054146,3.42781181284564,3.09215957332259,1.22490799214954,0.287536413054709,0,9.91042928994498,12.0026097800076,9.5236050618871,1.18697658957174,3.38504281328916,2.08365348222704,5.30447698102624,7.31591393041184,14.2102370432433,11.490514833473,13.9524247183121,2.42319279572891,0.302904773332736,1.058001841495,0,0,0,0.539703191637817,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,4.09893115816166,4.1889341362691,0,0,0,0,5.54225365797844,5.49000723382352,0.628271760564322,8.16974304903699,6.39288643325826,6.2336413367868,6.48965052271031,0.305518091550949,0,0,0.631325567659422,0.130120442962704,0,0,0.753524089178575,1.2246569847239,2.94661556655154,1.59292931751539,2.84573707812917,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,10.3042074796422,7.61494131606705,0,0.264450566663544,0.639864751605702,0.464473343720877,0.515469845288373,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81651769963376,4.33683240391152,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,9.63963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0.608929898229199,0,0,0,0,0.322928853391811,0.301564624640779,0,0,0,13.3506217447567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,8.74617949363636,9.16632821503035,7.56154002312225,10.2762377965596,10.5755145634558,6.07520250208625,12.158672487054,13.5942722695261,6.73088405277366,0,0,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,1.11123363900808,1.23621034343337,1.60459604795908,0.758091635291392,0.50695859978048,1.13175804831646,1.40462261204824,0.832326981263301,0.746661096422973,0.952587382566147,0.463537303779422,0.192909220463705,1.64834360321323,0.294397840268795,1.71434626192708,1.95223386775271,0.238436189947321,0.872078499793971,0.941093804153306,1.4384483341585,0.548783918618318,1.05227884575137,0.950628796921032,0,1.18635018124174,0.689531376628944,0,1.39443157067369,0.964533054905707,0.249810577937946,0.701794825336225,0.429742108096597,0.191288332068843,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,3.1739458756322,1.90149421051854,0,0,0,0,0,0,0,0.311068836925433,0.675029691658453,0.630974884054146,3.42781181284564,3.09215957332259,1.22490799214954,0.287536413054709,0,9.91042928994498,12.0026097800076,9.5236050618871,1.18697658957174,3.38504281328916,2.08365348222704,5.30447698102624,7.31591393041184,14.2102370432433,11.490514833473,13.9524247183121,2.42319279572891,0.302904773332736,1.058001841495,0,0,0,0.539703191637817,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,4.09893115816166,4.1889341362691,0,0,0,0,5.54225365797844,5.49000723382352,0.628271760564322,8.16974304903699,6.39288643325826,6.2336413367868,6.48965052271031,0.305518091550949,0,0,0.631325567659422,0.130120442962704,0,0,0.753524089178575,1.2246569847239,2.94661556655154,1.59292931751539,2.84573707812917,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,10.3042074796422,7.61494131606705,0,0.264450566663544,0.639864751605702,0.464473343720877,0.515469845288373,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81651769963376,4.33683240391152,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,9.63963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0.608929898229199,0,0,0,0,0.322928853391811,0.301564624640779,0,0,0,13.3506217447567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,8.74617949363636,9.16632821503035,7.56154002312225,10.2762377965596,10.5755145634558,6.07520250208625,12.158672487054,13.5942722695261,6.73088405277366,0,0,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,1.11123363900808,1.23621034343337,1.60459604795908,0.758091635291392,0.50695859978048,1.13175804831646,1.40462261204824,0.832326981263301,0.746661096422973,0.952587382566147,0.463537303779422,0.192909220463705,1.64834360321323,0.294397840268795,1.71434626192708,1.95223386775271,0.238436189947321,0.872078499793971,0.941093804153306,1.4384483341585,0.548783918618318,1.05227884575137,0.950628796921032,0,1.18635018124174,0.689531376628944,0,1.39443157067369,0.964533054905707,0.249810577937946,0.701794825336225,0.429742108096597,0.191288332068843,0,0.231867835620421
|short_description=p2@Gabra2
|short_description=p2@Gabra2
}}
}}

Latest revision as of 04:40, 26 September 2015

Short description:p2@Gabra2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gabra2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 90bp_to_ENSMUST00000000572, NM_008066, uc008xqw.1, uc012dww.1_5end
EntrezGene:Gabra2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gabra2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.54
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D58.17
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G17.61
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C913.35
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.42e-1623
neuroblast (sensu Vertebrata)3.42e-1623
neuron7.06e-1033
neuronal stem cell7.06e-1033
neuroblast7.06e-1033
electrically signaling cell7.06e-1033
electrically responsive cell1.10e-0739
electrically active cell1.10e-0739
neural cell2.07e-0743
ectodermal cell3.84e-0744
neurectodermal cell3.84e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.79e-3454
neural tube4.99e-3152
neural rod4.99e-3152
future spinal cord4.99e-3152
neural keel4.99e-3152
neurectoderm9.90e-3064
neural plate9.90e-3064
presumptive neural plate9.90e-3064
nervous system2.04e-2975
central nervous system4.71e-2973
gray matter2.55e-2734
ectoderm-derived structure5.83e-2695
ectoderm5.83e-2695
presumptive ectoderm5.83e-2695
ecto-epithelium1.05e-2473
brain1.81e-2447
future brain1.81e-2447
regional part of brain4.08e-2346
pre-chordal neural plate1.12e-2049
brain grey matter1.14e-2029
regional part of telencephalon1.14e-2029
telencephalon1.14e-2029
anterior neural tube6.98e-2040
regional part of forebrain1.03e-1839
forebrain1.03e-1839
future forebrain1.03e-1839
structure with developmental contribution from neural crest2.32e-1792
occipital lobe1.80e-1610
visual cortex1.80e-1610
neocortex1.80e-1610
regional part of cerebral cortex1.04e-1417
cerebral cortex3.20e-1321
cerebral hemisphere3.20e-1321
pallium3.20e-1321
posterior neural tube6.15e-1212
chordal neural plate6.15e-1212
spinal cord6.96e-106
dorsal region element6.96e-106
dorsum6.96e-106
basal ganglion7.44e-098
nuclear complex of neuraxis7.44e-098
aggregate regional part of brain7.44e-098
collection of basal ganglia7.44e-098
cerebral subcortex7.44e-098
tube7.76e-09114
regional part of spinal cord3.02e-085
gray matter of spinal cord3.02e-085
anatomical conduit1.15e-07122
regional part of midbrain3.13e-074
midbrain3.13e-074
presumptive midbrain3.13e-074
midbrain neural tube3.13e-074
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