FFCP PHASE1:Mm9::chr5:71486979..71486997,-: Difference between revisions
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{{FFCP|EntrezGene=14395|HGNC=|MCL_coexpression_id=1|UniProt=P26048,Q544G1|association_with_transcript=90bp_to_ENSMUST00000000572,NM_008066,uc008xqw.1,uc012dww.1_5end|description=CAGE_peak_2_at_Gabra2_5end|id=chr5:71486979..71486997,-|ontology_enrichment_celltype=CL:0000117!6.71e-15!23;CL:0000337!6.71e-15!23;CL:0000540!1.94e-09!33;CL:0000047!1.94e-09!33;CL:0000031!1.94e-09!33;CL:0000404!1.94e-09!33;CL:0000393!8.58e-07!39;CL:0000211!8.58e-07!39;CL:0002319!9.38e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.42e-16,23;CL:0000337,3.42e-16,23;CL:0000540,7.06e-10,33;CL:0000047,7.06e-10,33;CL:0000031,7.06e-10,33;CL:0000404,7.06e-10,33;CL:0000393,1.10e-07,39;CL:0000211,1.10e-07,39;CL:0002319,2.07e-07,43;CL:0000221,3.84e-07,44;CL:0000133,3.84e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.41e-25!52;UBERON:0005068!2.41e-25!52;UBERON:0006241!2.41e-25!52;UBERON:0007135!2.41e-25!52;UBERON:0000073!4.48e-24!75;UBERON:0001016!4.48e-24!75;UBERON:0000955!7.16e-24!50;UBERON:0006238!7.16e-24!50;UBERON:0000033!2.23e-23!63;UBERON:0001017!3.98e-23!73;UBERON:0005743!3.98e-23!73;UBERON:0002616!6.04e-23!49;UBERON:0002346!8.28e-23!71;UBERON:0003075!8.28e-23!71;UBERON:0007284!8.28e-23!71;UBERON:0002020!3.23e-21!34;UBERON:0003056!6.33e-21!49;UBERON:0004121!2.03e-20!102;UBERON:0000924!2.03e-20!102;UBERON:0006601!2.03e-20!102;UBERON:0003080!1.07e-18!40;UBERON:0002780!6.56e-18!39;UBERON:0001890!6.56e-18!39;UBERON:0006240!6.56e-18!39;UBERON:0002791!4.65e-17!29;UBERON:0003528!4.65e-17!29;UBERON:0001893!4.65e-17!29;UBERON:0007811!7.59e-13!86;UBERON:0000153!1.99e-11!94;UBERON:0000956!2.21e-11!21;UBERON:0001869!2.21e-11!21;UBERON:0000203!2.21e-11!21;UBERON:0002021!2.46e-10!10;UBERON:0000411!2.46e-10!10;UBERON:0001950!2.46e-10!10;UBERON:0002619!1.75e-09!17;UBERON:0003076!3.32e-07!12;UBERON:0003057!3.32e-07!12;UBERON:0002420!5.00e-07!8;UBERON:0007245!5.00e-07!8;UBERON:0010009!5.00e-07!8;UBERON:0010011!5.00e-07!8;UBERON:0000454!5.00e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.79e-34,54;UBERON:0001049,4.99e-31,52;UBERON:0005068,4.99e-31,52;UBERON:0006241,4.99e-31,52;UBERON:0007135,4.99e-31,52;UBERON:0002346,9.90e-30,64;UBERON:0003075,9.90e-30,64;UBERON:0007284,9.90e-30,64;UBERON:0001016,2.04e-29,75;UBERON:0001017,4.71e-29,73;UBERON:0002020,2.55e-27,34;UBERON:0004121,5.83e-26,95;UBERON:0000924,5.83e-26,95;UBERON:0006601,5.83e-26,95;UBERON:0010371,1.05e-24,73;UBERON:0000955,1.81e-24,47;UBERON:0006238,1.81e-24,47;UBERON:0002616,4.08e-23,46;UBERON:0003056,1.12e-20,49;UBERON:0003528,1.14e-20,29;UBERON:0002791,1.14e-20,29;UBERON:0001893,1.14e-20,29;UBERON:0003080,6.98e-20,40;UBERON:0002780,1.03e-18,39;UBERON:0001890,1.03e-18,39;UBERON:0006240,1.03e-18,39;UBERON:0010314,2.32e-17,92;UBERON:0002021,1.80e-16,10;UBERON:0000411,1.80e-16,10;UBERON:0001950,1.80e-16,10;UBERON:0002619,1.04e-14,17;UBERON:0000956,3.20e-13,21;UBERON:0001869,3.20e-13,21;UBERON:0000203,3.20e-13,21;UBERON:0003076,6.15e-12,12;UBERON:0003057,6.15e-12,12;UBERON:0002240,6.96e-10,6;UBERON:0005174,6.96e-10,6;UBERON:0001137,6.96e-10,6;UBERON:0002420,7.44e-09,8;UBERON:0007245,7.44e-09,8;UBERON:0010009,7.44e-09,8;UBERON:0010011,7.44e-09,8;UBERON:0000454,7.44e-09,8;UBERON:0000025,7.76e-09,114;UBERON:0001948,3.02e-08,5;UBERON:0002315,3.02e-08,5;UBERON:0004111,1.15e-07,122;UBERON:0002950,3.13e-07,4;UBERON:0001891,3.13e-07,4;UBERON:0009616,3.13e-07,4;UBERON:0010286,3.13e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,3.1739458756322,1.90149421051854,0,0,0,0,0,0,0,0.311068836925433,0.675029691658453,0.630974884054146,3.42781181284564,3.09215957332259,1.22490799214954,0.287536413054709,0,9.91042928994498,12.0026097800076,9.5236050618871,1.18697658957174,3.38504281328916,2.08365348222704,5.30447698102624,7.31591393041184,14.2102370432433,11.490514833473,13.9524247183121,2.42319279572891,0.302904773332736,1.058001841495,0,0,0,0.539703191637817,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,4.09893115816166,4.1889341362691,0,0,0,0,5.54225365797844,5.49000723382352,0.628271760564322,8.16974304903699,6.39288643325826,6.2336413367868,6.48965052271031,0.305518091550949,0,0,0.631325567659422,0.130120442962704,0,0,0.753524089178575,1.2246569847239,2.94661556655154,1.59292931751539,2.84573707812917,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,10.3042074796422,7.61494131606705,0,0.264450566663544,0.639864751605702,0.464473343720877,0.515469845288373,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81651769963376,4.33683240391152,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,9.63963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0.608929898229199,0,0,0,0,0.322928853391811,0.301564624640779,0,0,0,13.3506217447567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,8.74617949363636,9.16632821503035,7.56154002312225,10.2762377965596,10.5755145634558,6.07520250208625,12.158672487054,13.5942722695261,6.73088405277366,0,0,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,1.11123363900808,1.23621034343337,1.60459604795908,0.758091635291392,0.50695859978048,1.13175804831646,1.40462261204824,0.832326981263301,0.746661096422973,0.952587382566147,0.463537303779422,0.192909220463705,1.64834360321323,0.294397840268795,1.71434626192708,1.95223386775271,0.238436189947321,0.872078499793971,0.941093804153306,1.4384483341585,0.548783918618318,1.05227884575137,0.950628796921032,0,1.18635018124174,0.689531376628944,0,1.39443157067369,0.964533054905707,0.249810577937946,0.701794825336225,0.429742108096597,0.191288332068843,0,0.231867835620421|short_description=p2@Gabra2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14395 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P26048,Q544G1 | |||
|association_with_transcript=90bp_to_ENSMUST00000000572,NM_008066,uc008xqw.1,uc012dww.1_5end | |||
|cluster_id=chr5:71486979..71486997,- | |||
|description=CAGE_peak_2_at_Gabra2_5end | |||
|id=chr5:71486979..71486997,- | |||
|ontology_enrichment_celltype=CL:0000117!6.71e-15!23;CL:0000337!6.71e-15!23;CL:0000540!1.94e-09!33;CL:0000047!1.94e-09!33;CL:0000031!1.94e-09!33;CL:0000404!1.94e-09!33;CL:0000393!8.58e-07!39;CL:0000211!8.58e-07!39;CL:0002319!9.38e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.42e-16,23;CL:0000337,3.42e-16,23;CL:0000540,7.06e-10,33;CL:0000047,7.06e-10,33;CL:0000031,7.06e-10,33;CL:0000404,7.06e-10,33;CL:0000393,1.10e-07,39;CL:0000211,1.10e-07,39;CL:0002319,2.07e-07,43;CL:0000221,3.84e-07,44;CL:0000133,3.84e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.41e-25!52;UBERON:0005068!2.41e-25!52;UBERON:0006241!2.41e-25!52;UBERON:0007135!2.41e-25!52;UBERON:0000073!4.48e-24!75;UBERON:0001016!4.48e-24!75;UBERON:0000955!7.16e-24!50;UBERON:0006238!7.16e-24!50;UBERON:0000033!2.23e-23!63;UBERON:0001017!3.98e-23!73;UBERON:0005743!3.98e-23!73;UBERON:0002616!6.04e-23!49;UBERON:0002346!8.28e-23!71;UBERON:0003075!8.28e-23!71;UBERON:0007284!8.28e-23!71;UBERON:0002020!3.23e-21!34;UBERON:0003056!6.33e-21!49;UBERON:0004121!2.03e-20!102;UBERON:0000924!2.03e-20!102;UBERON:0006601!2.03e-20!102;UBERON:0003080!1.07e-18!40;UBERON:0002780!6.56e-18!39;UBERON:0001890!6.56e-18!39;UBERON:0006240!6.56e-18!39;UBERON:0002791!4.65e-17!29;UBERON:0003528!4.65e-17!29;UBERON:0001893!4.65e-17!29;UBERON:0007811!7.59e-13!86;UBERON:0000153!1.99e-11!94;UBERON:0000956!2.21e-11!21;UBERON:0001869!2.21e-11!21;UBERON:0000203!2.21e-11!21;UBERON:0002021!2.46e-10!10;UBERON:0000411!2.46e-10!10;UBERON:0001950!2.46e-10!10;UBERON:0002619!1.75e-09!17;UBERON:0003076!3.32e-07!12;UBERON:0003057!3.32e-07!12;UBERON:0002420!5.00e-07!8;UBERON:0007245!5.00e-07!8;UBERON:0010009!5.00e-07!8;UBERON:0010011!5.00e-07!8;UBERON:0000454!5.00e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.79e-34,54;UBERON:0001049,4.99e-31,52;UBERON:0005068,4.99e-31,52;UBERON:0006241,4.99e-31,52;UBERON:0007135,4.99e-31,52;UBERON:0002346,9.90e-30,64;UBERON:0003075,9.90e-30,64;UBERON:0007284,9.90e-30,64;UBERON:0001016,2.04e-29,75;UBERON:0001017,4.71e-29,73;UBERON:0002020,2.55e-27,34;UBERON:0004121,5.83e-26,95;UBERON:0000924,5.83e-26,95;UBERON:0006601,5.83e-26,95;UBERON:0010371,1.05e-24,73;UBERON:0000955,1.81e-24,47;UBERON:0006238,1.81e-24,47;UBERON:0002616,4.08e-23,46;UBERON:0003056,1.12e-20,49;UBERON:0003528,1.14e-20,29;UBERON:0002791,1.14e-20,29;UBERON:0001893,1.14e-20,29;UBERON:0003080,6.98e-20,40;UBERON:0002780,1.03e-18,39;UBERON:0001890,1.03e-18,39;UBERON:0006240,1.03e-18,39;UBERON:0010314,2.32e-17,92;UBERON:0002021,1.80e-16,10;UBERON:0000411,1.80e-16,10;UBERON:0001950,1.80e-16,10;UBERON:0002619,1.04e-14,17;UBERON:0000956,3.20e-13,21;UBERON:0001869,3.20e-13,21;UBERON:0000203,3.20e-13,21;UBERON:0003076,6.15e-12,12;UBERON:0003057,6.15e-12,12;UBERON:0002240,6.96e-10,6;UBERON:0005174,6.96e-10,6;UBERON:0001137,6.96e-10,6;UBERON:0002420,7.44e-09,8;UBERON:0007245,7.44e-09,8;UBERON:0010009,7.44e-09,8;UBERON:0010011,7.44e-09,8;UBERON:0000454,7.44e-09,8;UBERON:0000025,7.76e-09,114;UBERON:0001948,3.02e-08,5;UBERON:0002315,3.02e-08,5;UBERON:0004111,1.15e-07,122;UBERON:0002950,3.13e-07,4;UBERON:0001891,3.13e-07,4;UBERON:0009616,3.13e-07,4;UBERON:0010286,3.13e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,3.1739458756322,1.90149421051854,0,0,0,0,0,0,0,0.311068836925433,0.675029691658453,0.630974884054146,3.42781181284564,3.09215957332259,1.22490799214954,0.287536413054709,0,9.91042928994498,12.0026097800076,9.5236050618871,1.18697658957174,3.38504281328916,2.08365348222704,5.30447698102624,7.31591393041184,14.2102370432433,11.490514833473,13.9524247183121,2.42319279572891,0.302904773332736,1.058001841495,0,0,0,0.539703191637817,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,4.09893115816166,4.1889341362691,0,0,0,0,5.54225365797844,5.49000723382352,0.628271760564322,8.16974304903699,6.39288643325826,6.2336413367868,6.48965052271031,0.305518091550949,0,0,0.631325567659422,0.130120442962704,0,0,0.753524089178575,1.2246569847239,2.94661556655154,1.59292931751539,2.84573707812917,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,10.3042074796422,7.61494131606705,0,0.264450566663544,0.639864751605702,0.464473343720877,0.515469845288373,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81651769963376,4.33683240391152,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,9.63963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0.608929898229199,0,0,0,0,0.322928853391811,0.301564624640779,0,0,0,13.3506217447567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,8.74617949363636,9.16632821503035,7.56154002312225,10.2762377965596,10.5755145634558,6.07520250208625,12.158672487054,13.5942722695261,6.73088405277366,0,0,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,1.11123363900808,1.23621034343337,1.60459604795908,0.758091635291392,0.50695859978048,1.13175804831646,1.40462261204824,0.832326981263301,0.746661096422973,0.952587382566147,0.463537303779422,0.192909220463705,1.64834360321323,0.294397840268795,1.71434626192708,1.95223386775271,0.238436189947321,0.872078499793971,0.941093804153306,1.4384483341585,0.548783918618318,1.05227884575137,0.950628796921032,0,1.18635018124174,0.689531376628944,0,1.39443157067369,0.964533054905707,0.249810577937946,0.701794825336225,0.429742108096597,0.191288332068843,0,0.231867835620421 | |||
|short_description=p2@Gabra2 | |||
}} |
Latest revision as of 04:40, 26 September 2015
Short description: | p2@Gabra2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gabra2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 90bp_to_ENSMUST00000000572, NM_008066, uc008xqw.1, uc012dww.1_5end |
EntrezGene: | Gabra2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.42e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.42e-16 | 23 |
neuron | 7.06e-10 | 33 |
neuronal stem cell | 7.06e-10 | 33 |
neuroblast | 7.06e-10 | 33 |
electrically signaling cell | 7.06e-10 | 33 |
electrically responsive cell | 1.10e-07 | 39 |
electrically active cell | 1.10e-07 | 39 |
neural cell | 2.07e-07 | 43 |
ectodermal cell | 3.84e-07 | 44 |
neurectodermal cell | 3.84e-07 | 44 |