FFCP PHASE1:Mm9::chr10:63552941..63552958,-: Difference between revisions
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{{FFCP|EntrezGene=216028|HGNC=|MCL_coexpression_id=39|UniProt=|association_with_transcript=36bp_to_ENSMUST00000148712_5end|description=CAGE_peak_3_at_Lrrtm3_5end|id=chr10:63552941..63552958,-|ontology_enrichment_celltype=CL:0000117!6.67e-11!23;CL:0000337!6.67e-11!23;CL:0000540!8.16e-10!33;CL:0000047!8.16e-10!33;CL:0000031!8.16e-10!33;CL:0000404!8.16e-10!33;CL:0000221!4.99e-08!44;CL:0000133!4.99e-08!44;CL:0000393!1.09e-07!39;CL:0000211!1.09e-07!39;CL:0002319!1.13e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,5.48e-13,23;CL:0000337,5.48e-13,23;CL:0000540,3.13e-08,33;CL:0000047,3.13e-08,33;CL:0000031,3.13e-08,33;CL:0000404,3.13e-08,33;CL:0002610,1.38e-07,3;CL:0002612,5.18e-07,3;CL:0002614,5.44e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.76e-24!75;UBERON:0001016!3.76e-24!75;UBERON:0001017!7.09e-24!73;UBERON:0005743!7.09e-24!73;UBERON:0001049!1.37e-21!52;UBERON:0005068!1.37e-21!52;UBERON:0006241!1.37e-21!52;UBERON:0007135!1.37e-21!52;UBERON:0004121!1.51e-20!102;UBERON:0000924!1.51e-20!102;UBERON:0006601!1.51e-20!102;UBERON:0000955!2.55e-20!50;UBERON:0006238!2.55e-20!50;UBERON:0002616!1.85e-19!49;UBERON:0000033!2.37e-19!63;UBERON:0002020!1.75e-18!34;UBERON:0002346!2.09e-18!71;UBERON:0003075!2.09e-18!71;UBERON:0007284!2.09e-18!71;UBERON:0003056!1.04e-15!49;UBERON:0003080!2.95e-15!40;UBERON:0002791!7.67e-15!29;UBERON:0003528!7.67e-15!29;UBERON:0001893!7.67e-15!29;UBERON:0002780!1.78e-14!39;UBERON:0001890!1.78e-14!39;UBERON:0006240!1.78e-14!39;UBERON:0007811!3.47e-10!86;UBERON:0002021!6.16e-10!10;UBERON:0000411!6.16e-10!10;UBERON:0001950!6.16e-10!10;UBERON:0000956!7.80e-10!21;UBERON:0001869!7.80e-10!21;UBERON:0000203!7.80e-10!21;UBERON:0002619!7.21e-09!17;UBERON:0000153!1.97e-08!94;UBERON:0003076!4.13e-07!12;UBERON:0003057!4.13e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.90e-40,54;UBERON:0001049,8.66e-37,52;UBERON:0005068,8.66e-37,52;UBERON:0006241,8.66e-37,52;UBERON:0007135,8.66e-37,52;UBERON:0001017,1.54e-34,73;UBERON:0001016,2.04e-33,75;UBERON:0002020,1.65e-30,34;UBERON:0002346,1.43e-28,64;UBERON:0003075,1.43e-28,64;UBERON:0007284,1.43e-28,64;UBERON:0000955,1.62e-28,47;UBERON:0006238,1.62e-28,47;UBERON:0002616,1.11e-26,46;UBERON:0004121,8.77e-25,95;UBERON:0000924,8.77e-25,95;UBERON:0006601,8.77e-25,95;UBERON:0010371,3.55e-24,73;UBERON:0002021,6.09e-23,10;UBERON:0000411,6.09e-23,10;UBERON:0001950,6.09e-23,10;UBERON:0003528,4.01e-22,29;UBERON:0002791,4.01e-22,29;UBERON:0001893,4.01e-22,29;UBERON:0003080,4.65e-21,40;UBERON:0002780,2.01e-19,39;UBERON:0001890,2.01e-19,39;UBERON:0006240,2.01e-19,39;UBERON:0002619,9.39e-18,17;UBERON:0010314,1.01e-17,92;UBERON:0003076,1.99e-17,12;UBERON:0003057,1.99e-17,12;UBERON:0000956,1.31e-16,21;UBERON:0001869,1.31e-16,21;UBERON:0000203,1.31e-16,21;UBERON:0003056,3.01e-16,49;UBERON:0000025,6.17e-13,114;UBERON:0002240,1.40e-12,6;UBERON:0005174,1.40e-12,6;UBERON:0001137,1.40e-12,6;UBERON:0004111,1.26e-11,122;UBERON:0001948,2.10e-10,5;UBERON:0002315,2.10e-10,5;UBERON:0002950,4.37e-09,4;UBERON:0001891,4.37e-09,4;UBERON:0009616,4.37e-09,4;UBERON:0010286,4.37e-09,4;UBERON:0011216,3.58e-08,194;UBERON:0004684,1.38e-07,3;UBERON:0002275,1.38e-07,3;UBERON:0002257,5.18e-07,3;UBERON:0002038,5.44e-07,3;UBERON:0009663,5.44e-07,3;UBERON:0009661,5.44e-07,3;UBERON:0000125,5.44e-07,3;UBERON:0002308,5.44e-07,3;UBERON:0004733,7.39e-07,6;UBERON:0004732,7.39e-07,6;UBERON:0002028,7.39e-07,6;UBERON:0007277,7.39e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,1.41621522601718,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.675029691658453,0,1.42825492201902,2.20868540951614,0.61245399607477,0.383381884072945,0,8.8092704799511,4.21368215681119,4.6081959976873,0.395658863190582,0.457438218012048,1.04182674111352,3.35019598801657,3.93933827022176,3.0559649555362,3.24091444021034,5.69486723196412,1.1183966749518,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,16.3957246326466,14.0329293565015,0,0,0,0,5.99162557619291,9.15001205637253,0.753926112677186,12.5153510538439,9.97290283588289,4.98691306942944,5.19172041816825,0,0.124406970610093,0,0,0,0.229902104433473,0,0.452114453507145,0.272145996605311,0.768682321709099,0.187403449119458,0.776110112217047,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.15434922846191,1.02904612379284,0,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,4.65596710964597,5.15731421005694,0,0,0,0,0,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,0,8.67567554338879,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.493647061806363,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,7.04616147639937,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0.523511883968059,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0.410843828659309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,5.9842280745933,5.72895513439397,8.93636548187176,8.90607275701835,10.5755145634558,4.72515750162264,6.75481804836331,4.53142408984205,6.73088405277366,0.103787347584177,0,0.170733605754134,0,0.628839487883947,0.919217542250071,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.565879024158229,0.561849044819294,0.448176066834085,0.34461281373368,0.476293691283074,0.347652977834566,0.578727661391115,1.23625770240992,0,0.342869252385415,0.887379030796687,0.238436189947321,0.436039249896986,0.846984423737976,0.25384382367503,1.46342378298218,0.526139422875686,0.135804113845862,0,0.355905054372522,0.689531376628944,0.818462086339379,0.77468420592983,0.385813221962283,0,0,0.214871054048298,0.57386499620653,0,0.231867835620421|short_description=p3@Lrrtm3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216028 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=36bp_to_ENSMUST00000148712_5end | |||
|cluster_id=chr10:63552941..63552958,- | |||
|description=CAGE_peak_3_at_Lrrtm3_5end | |||
|id=chr10:63552941..63552958,- | |||
|ontology_enrichment_celltype=CL:0000117!6.67e-11!23;CL:0000337!6.67e-11!23;CL:0000540!8.16e-10!33;CL:0000047!8.16e-10!33;CL:0000031!8.16e-10!33;CL:0000404!8.16e-10!33;CL:0000221!4.99e-08!44;CL:0000133!4.99e-08!44;CL:0000393!1.09e-07!39;CL:0000211!1.09e-07!39;CL:0002319!1.13e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.48e-13,23;CL:0000337,5.48e-13,23;CL:0000540,3.13e-08,33;CL:0000047,3.13e-08,33;CL:0000031,3.13e-08,33;CL:0000404,3.13e-08,33;CL:0002610,1.38e-07,3;CL:0002612,5.18e-07,3;CL:0002614,5.44e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.76e-24!75;UBERON:0001016!3.76e-24!75;UBERON:0001017!7.09e-24!73;UBERON:0005743!7.09e-24!73;UBERON:0001049!1.37e-21!52;UBERON:0005068!1.37e-21!52;UBERON:0006241!1.37e-21!52;UBERON:0007135!1.37e-21!52;UBERON:0004121!1.51e-20!102;UBERON:0000924!1.51e-20!102;UBERON:0006601!1.51e-20!102;UBERON:0000955!2.55e-20!50;UBERON:0006238!2.55e-20!50;UBERON:0002616!1.85e-19!49;UBERON:0000033!2.37e-19!63;UBERON:0002020!1.75e-18!34;UBERON:0002346!2.09e-18!71;UBERON:0003075!2.09e-18!71;UBERON:0007284!2.09e-18!71;UBERON:0003056!1.04e-15!49;UBERON:0003080!2.95e-15!40;UBERON:0002791!7.67e-15!29;UBERON:0003528!7.67e-15!29;UBERON:0001893!7.67e-15!29;UBERON:0002780!1.78e-14!39;UBERON:0001890!1.78e-14!39;UBERON:0006240!1.78e-14!39;UBERON:0007811!3.47e-10!86;UBERON:0002021!6.16e-10!10;UBERON:0000411!6.16e-10!10;UBERON:0001950!6.16e-10!10;UBERON:0000956!7.80e-10!21;UBERON:0001869!7.80e-10!21;UBERON:0000203!7.80e-10!21;UBERON:0002619!7.21e-09!17;UBERON:0000153!1.97e-08!94;UBERON:0003076!4.13e-07!12;UBERON:0003057!4.13e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.90e-40,54;UBERON:0001049,8.66e-37,52;UBERON:0005068,8.66e-37,52;UBERON:0006241,8.66e-37,52;UBERON:0007135,8.66e-37,52;UBERON:0001017,1.54e-34,73;UBERON:0001016,2.04e-33,75;UBERON:0002020,1.65e-30,34;UBERON:0002346,1.43e-28,64;UBERON:0003075,1.43e-28,64;UBERON:0007284,1.43e-28,64;UBERON:0000955,1.62e-28,47;UBERON:0006238,1.62e-28,47;UBERON:0002616,1.11e-26,46;UBERON:0004121,8.77e-25,95;UBERON:0000924,8.77e-25,95;UBERON:0006601,8.77e-25,95;UBERON:0010371,3.55e-24,73;UBERON:0002021,6.09e-23,10;UBERON:0000411,6.09e-23,10;UBERON:0001950,6.09e-23,10;UBERON:0003528,4.01e-22,29;UBERON:0002791,4.01e-22,29;UBERON:0001893,4.01e-22,29;UBERON:0003080,4.65e-21,40;UBERON:0002780,2.01e-19,39;UBERON:0001890,2.01e-19,39;UBERON:0006240,2.01e-19,39;UBERON:0002619,9.39e-18,17;UBERON:0010314,1.01e-17,92;UBERON:0003076,1.99e-17,12;UBERON:0003057,1.99e-17,12;UBERON:0000956,1.31e-16,21;UBERON:0001869,1.31e-16,21;UBERON:0000203,1.31e-16,21;UBERON:0003056,3.01e-16,49;UBERON:0000025,6.17e-13,114;UBERON:0002240,1.40e-12,6;UBERON:0005174,1.40e-12,6;UBERON:0001137,1.40e-12,6;UBERON:0004111,1.26e-11,122;UBERON:0001948,2.10e-10,5;UBERON:0002315,2.10e-10,5;UBERON:0002950,4.37e-09,4;UBERON:0001891,4.37e-09,4;UBERON:0009616,4.37e-09,4;UBERON:0010286,4.37e-09,4;UBERON:0011216,3.58e-08,194;UBERON:0004684,1.38e-07,3;UBERON:0002275,1.38e-07,3;UBERON:0002257,5.18e-07,3;UBERON:0002038,5.44e-07,3;UBERON:0009663,5.44e-07,3;UBERON:0009661,5.44e-07,3;UBERON:0000125,5.44e-07,3;UBERON:0002308,5.44e-07,3;UBERON:0004733,7.39e-07,6;UBERON:0004732,7.39e-07,6;UBERON:0002028,7.39e-07,6;UBERON:0007277,7.39e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,1.41621522601718,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.675029691658453,0,1.42825492201902,2.20868540951614,0.61245399607477,0.383381884072945,0,8.8092704799511,4.21368215681119,4.6081959976873,0.395658863190582,0.457438218012048,1.04182674111352,3.35019598801657,3.93933827022176,3.0559649555362,3.24091444021034,5.69486723196412,1.1183966749518,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,16.3957246326466,14.0329293565015,0,0,0,0,5.99162557619291,9.15001205637253,0.753926112677186,12.5153510538439,9.97290283588289,4.98691306942944,5.19172041816825,0,0.124406970610093,0,0,0,0.229902104433473,0,0.452114453507145,0.272145996605311,0.768682321709099,0.187403449119458,0.776110112217047,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.15434922846191,1.02904612379284,0,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,4.65596710964597,5.15731421005694,0,0,0,0,0,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,0,8.67567554338879,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.493647061806363,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,7.04616147639937,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0.523511883968059,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0.410843828659309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,5.9842280745933,5.72895513439397,8.93636548187176,8.90607275701835,10.5755145634558,4.72515750162264,6.75481804836331,4.53142408984205,6.73088405277366,0.103787347584177,0,0.170733605754134,0,0.628839487883947,0.919217542250071,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.565879024158229,0.561849044819294,0.448176066834085,0.34461281373368,0.476293691283074,0.347652977834566,0.578727661391115,1.23625770240992,0,0.342869252385415,0.887379030796687,0.238436189947321,0.436039249896986,0.846984423737976,0.25384382367503,1.46342378298218,0.526139422875686,0.135804113845862,0,0.355905054372522,0.689531376628944,0.818462086339379,0.77468420592983,0.385813221962283,0,0,0.214871054048298,0.57386499620653,0,0.231867835620421 | |||
|short_description=p3@Lrrtm3 | |||
}} |
Latest revision as of 05:02, 26 September 2015
Short description: | p3@Lrrtm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lrrtm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 36bp_to_ENSMUST00000148712_5end |
EntrezGene: | Lrrtm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.48e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.48e-13 | 23 |
neuron | 3.13e-08 | 33 |
neuronal stem cell | 3.13e-08 | 33 |
neuroblast | 3.13e-08 | 33 |
electrically signaling cell | 3.13e-08 | 33 |
raphe nuclei neuron | 1.38e-07 | 3 |
neuron of the ventral spinal cord | 5.18e-07 | 3 |
neuron of the substantia nigra | 5.44e-07 | 3 |