FFCP PHASE1:Mm9::chr1:127573438..127573451,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:127573438..127573451,+ to FFCP PHASE1:Mm9::chr1:127573438..127573451,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71111 | |EntrezGene=71111 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1028 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-120bp_to_ENSMUST00000027581_5end | |||
|cluster_id=chr1:127573438..127573451,+ | |||
|description=CAGE_peak_5_at_Gpr39_5end | |||
|id=chr1:127573438..127573451,+ | |||
|ontology_enrichment_celltype=CL:0000680!4.02e-10!6;CL:0000183!4.02e-10!6;CL:0000187!4.02e-10!6;CL:0000056!4.02e-10!6;CL:0000222!1.71e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.46e-30,3;CL:0000359,1.46e-30,3;CL:0002539,1.46e-30,3;CL:0000514,1.46e-30,3;CL:0002293,1.40e-29,3;CL:0000680,1.08e-26,6;CL:0000187,1.08e-26,6;CL:0000056,1.08e-26,6;CL:0000222,5.88e-23,7;CL:0000355,5.74e-18,9;CL:0002076,1.15e-10,15;CL:0002321,1.10e-08,70;CL:0000223,4.36e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.09e-09!14;UBERON:0000117!1.09e-09!14;UBERON:0000171!1.09e-09!14;UBERON:0000170!1.09e-09!14;UBERON:0005597!1.09e-09!14;UBERON:0000118!1.09e-09!14;UBERON:0004535!2.21e-09!23;UBERON:0001009!2.21e-09!23;UBERON:0005178!4.15e-09!17;UBERON:0005181!4.15e-09!17;UBERON:0002224!4.15e-09!17;UBERON:0000915!4.15e-09!17;UBERON:0008947!4.15e-09!17;UBERON:0003258!4.15e-09!17;UBERON:0000926!1.55e-08!193;UBERON:0004120!1.55e-08!193;UBERON:0006603!1.55e-08!193;UBERON:0004872!2.19e-08!33;UBERON:0003103!1.47e-07!43;UBERON:0005153!1.64e-07!17;UBERON:0007100!3.53e-07!18;UBERON:0000948!3.53e-07!18;UBERON:0005498!3.53e-07!18;UBERON:0004140!3.53e-07!18;UBERON:0009881!3.53e-07!18;UBERON:0004141!3.53e-07!18;UBERON:0003084!3.53e-07!18;UBERON:0007005!3.53e-07!18;UBERON:0004139!3.53e-07!18;UBERON:0004291!3.53e-07!18;UBERON:0003914!5.81e-07!47;UBERON:0002100!7.42e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.46e-30,3;UBERON:0004237,1.46e-30,3;UBERON:0004695,1.46e-30,3;UBERON:0002111,1.46e-30,3;UBERON:0004178,1.46e-30,3;UBERON:0000947,3.97e-23,4;UBERON:0001637,3.97e-23,4;UBERON:0004573,3.97e-23,4;UBERON:0003509,3.97e-23,4;UBERON:0004571,3.97e-23,4;UBERON:0010191,3.97e-23,4;UBERON:0004572,3.97e-23,4;UBERON:0000055,1.17e-18,5;UBERON:0007500,1.17e-18,5;UBERON:0001981,1.17e-18,5;UBERON:0002049,1.17e-18,5;UBERON:0007798,1.17e-18,5;UBERON:0004537,1.17e-18,5;UBERON:0006965,1.17e-18,5;UBERON:0001134,5.74e-18,9;UBERON:0002036,5.74e-18,9;UBERON:0002385,5.74e-18,9;UBERON:0000486,5.74e-18,9;UBERON:0007503,5.74e-18,9;UBERON:0001015,5.74e-18,9;UBERON:0002329,5.74e-18,9;UBERON:0003082,5.74e-18,9;UBERON:0003059,5.74e-18,9;UBERON:0007282,5.74e-18,9;UBERON:0004290,5.74e-18,9;UBERON:0009618,5.74e-18,9;UBERON:0000383,3.23e-16,10;UBERON:0007524,8.78e-15,11;UBERON:0003077,8.78e-15,11;UBERON:0007285,8.78e-15,11;UBERON:0000998,5.74e-11,1;UBERON:0007194,5.74e-11,1;UBERON:0006868,5.74e-11,1;UBERON:0000490,3.11e-09,66;UBERON:0004535,2.98e-07,23;UBERON:0001009,2.98e-07,23;UBERON:0003081,6.19e-07,87 | |||
|phase1_expression=0,0,0,0.30246421130683,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,7.67970589651021,8.21153142878068,2.56965453026354,0,0,0,0,0,0,0,0,0,1.80081605225163,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,2.54805239706646,7.11066703153331,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703578179943289,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0.31399745568275,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.476087281772027,0.390267295715598,0.472905432318573,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0.583353565032143,0.516639293910924,0,0,0.911430693907651,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0.965947970160952,0,0,0.214368379079066,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0.30246421130683,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,7.67970589651021,8.21153142878068,2.56965453026354,0,0,0,0,0,0,0,0,0,1.80081605225163,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,2.54805239706646,7.11066703153331,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703578179943289,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0.31399745568275,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.476087281772027,0.390267295715598,0.472905432318573,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0.583353565032143,0.516639293910924,0,0,0.911430693907651,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0.965947970160952,0,0,0.214368379079066,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p5@Gpr39 | |||
}} | }} |
Latest revision as of 07:04, 26 September 2015
Short description: | p5@Gpr39 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gpr39_5end |
Coexpression cluster: | MCL_coexpression_mm9:1028 |
Association with transcript: | -120bp_to_ENSMUST00000027581_5end |
EntrezGene: | Gpr39 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.46e-30 | 3 |
vascular associated smooth muscle cell | 1.46e-30 | 3 |
aortic smooth muscle cell | 1.46e-30 | 3 |
smooth muscle myoblast | 1.46e-30 | 3 |
epithelial cell of thymus | 1.40e-29 | 3 |
muscle precursor cell | 1.08e-26 | 6 |
muscle cell | 1.08e-26 | 6 |
myoblast | 1.08e-26 | 6 |
mesodermal cell | 5.88e-23 | 7 |
multi-potent skeletal muscle stem cell | 5.74e-18 | 9 |
endo-epithelial cell | 1.15e-10 | 15 |
embryonic cell | 1.10e-08 | 70 |
endodermal cell | 4.36e-08 | 20 |