FFCP PHASE1:Mm9::chr7:25857822..25857834,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:25857822..25857834,- to FFCP PHASE1:Mm9::chr7:25857822..25857834,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14809 | |EntrezGene=14809 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1841 | |||
|TSSclassifier=NA | |||
|UniProt=G5E822,Q80WU3,Q2TAX1 | |UniProt=G5E822,Q80WU3,Q2TAX1 | ||
|association_with_transcript=-434bp_to_ENSMUST00000003468,NM_008168,uc009frh.2,uc009fri.2_5end | |||
|cluster_id=chr7:25857822..25857834,- | |||
|description=CAGE_peak_4_at_Grik5_5end | |||
|id=chr7:25857822..25857834,- | |||
|ontology_enrichment_celltype=CL:0000221!3.30e-13!44;CL:0000133!3.30e-13!44;CL:0002319!7.14e-13!43;CL:0000540!1.62e-12!33;CL:0000047!1.62e-12!33;CL:0000031!1.62e-12!33;CL:0000404!1.62e-12!33;CL:0000117!7.61e-12!23;CL:0000337!7.61e-12!23;CL:0000055!2.84e-10!50;CL:0000393!3.27e-10!39;CL:0000211!3.27e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.60e-19,23;CL:0000337,2.60e-19,23;CL:0002319,3.75e-17,43;CL:0000221,1.40e-16,44;CL:0000133,1.40e-16,44;CL:0000540,1.19e-15,33;CL:0000047,1.19e-15,33;CL:0000031,1.19e-15,33;CL:0000404,1.19e-15,33;CL:0000393,3.06e-12,39;CL:0000211,3.06e-12,39;CL:0002321,1.30e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.27e-31!73;UBERON:0005743!8.27e-31!73;UBERON:0000073!4.20e-30!75;UBERON:0001016!4.20e-30!75;UBERON:0004121!3.85e-27!102;UBERON:0000924!3.85e-27!102;UBERON:0006601!3.85e-27!102;UBERON:0002346!2.03e-26!71;UBERON:0003075!2.03e-26!71;UBERON:0007284!2.03e-26!71;UBERON:0001049!7.56e-25!52;UBERON:0005068!7.56e-25!52;UBERON:0006241!7.56e-25!52;UBERON:0007135!7.56e-25!52;UBERON:0000955!9.12e-24!50;UBERON:0006238!9.12e-24!50;UBERON:0000033!2.19e-23!63;UBERON:0002616!2.79e-23!49;UBERON:0003056!1.36e-20!49;UBERON:0003080!1.53e-19!40;UBERON:0002780!6.12e-19!39;UBERON:0001890!6.12e-19!39;UBERON:0006240!6.12e-19!39;UBERON:0002020!1.74e-18!34;UBERON:0002791!1.27e-15!29;UBERON:0003528!1.27e-15!29;UBERON:0001893!1.27e-15!29;UBERON:0000153!4.68e-12!94;UBERON:0000956!8.05e-12!21;UBERON:0001869!8.05e-12!21;UBERON:0000203!8.05e-12!21;UBERON:0000025!5.49e-11!114;UBERON:0007811!6.19e-11!86;UBERON:0002619!3.73e-10!17;UBERON:0004111!9.77e-10!122;UBERON:0002021!4.98e-07!10;UBERON:0000411!4.98e-07!10;UBERON:0001950!4.98e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.78e-43,73;UBERON:0001016,6.39e-42,75;UBERON:0000073,1.02e-40,54;UBERON:0001049,1.08e-37,52;UBERON:0005068,1.08e-37,52;UBERON:0006241,1.08e-37,52;UBERON:0007135,1.08e-37,52;UBERON:0002346,1.77e-36,64;UBERON:0003075,1.77e-36,64;UBERON:0007284,1.77e-36,64;UBERON:0004121,9.12e-36,95;UBERON:0000924,9.12e-36,95;UBERON:0006601,9.12e-36,95;UBERON:0000955,9.63e-32,47;UBERON:0006238,9.63e-32,47;UBERON:0002020,1.19e-31,34;UBERON:0002616,8.75e-31,46;UBERON:0010371,2.56e-30,73;UBERON:0003080,6.92e-26,40;UBERON:0003528,1.04e-25,29;UBERON:0002791,1.04e-25,29;UBERON:0001893,1.04e-25,29;UBERON:0003056,1.59e-25,49;UBERON:0002780,1.00e-24,39;UBERON:0001890,1.00e-24,39;UBERON:0006240,1.00e-24,39;UBERON:0010314,2.61e-21,92;UBERON:0000956,1.81e-20,21;UBERON:0001869,1.81e-20,21;UBERON:0000203,1.81e-20,21;UBERON:0002619,2.88e-18,17;UBERON:0003076,5.95e-12,12;UBERON:0003057,5.95e-12,12;UBERON:0002021,1.25e-11,10;UBERON:0000411,1.25e-11,10;UBERON:0001950,1.25e-11,10;UBERON:0000025,1.12e-10,114;UBERON:0011216,5.84e-10,194;UBERON:0004111,2.99e-09,122;UBERON:0001954,4.75e-08,7;UBERON:0003022,4.75e-08,7;UBERON:0002421,4.75e-08,7;UBERON:0000349,4.75e-08,7;UBERON:0002600,4.75e-08,7;UBERON:0000369,5.28e-08,5;UBERON:0002435,5.28e-08,5;UBERON:0000204,5.28e-08,5;UBERON:0010082,5.28e-08,5;UBERON:0002240,9.19e-08,6;UBERON:0005174,9.19e-08,6;UBERON:0001137,9.19e-08,6;UBERON:0001948,4.54e-07,5;UBERON:0002315,4.54e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.881277725829041,0.608261587317087,0.367093504323363,0,2.18025156380447,1.09843091367236,1.1665793944457,0.839918529752175,0,0,0.725362142011344,0,0,0,0,1.61853168687678,1.05798195854407,1.90149421051854,0,0,0,0,0,1.79760066311043,2.30530983192933,1.65903379693564,1.4850653216486,0.630974884054146,1.14260393761521,1.98781686856452,1.22490799214954,1.0543001812006,1.83843757322004,4.40463523997555,1.27687338085188,2.15049146558741,2.50583946687368,2.92760459527711,2.6045668527838,0.837548997004143,0.56276261003168,1.5279824777681,2.94628585473668,2.42031857358475,1.4911955666024,0.075726193333184,0.453429360640713,0.579728977403356,0,0,0,0,0.448026887097336,0,0.170430322578058,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,0.346970653532272,0.913396434936424,0.461230994512117,0.452167921657868,0.587943535678524,0.376999773989026,0,0.433798070759735,0,0.161766849947409,0,0,1.86391761218122,1.17112318804619,3.77004072264219,0,0,0,0.127070227073065,1.9472783122627,2.28750301409313,2.01046963380583,2.9550134432687,1.79000820131231,2.90903262383384,2.59586020908412,0.712875546952214,0.124406970610093,0.252722758433675,1.26265113531884,1.56144531555244,0,0.180062129805349,1.35634336052144,0.816437989815934,0.896796041993948,0.937017245597288,1.03481348295606,1.29340795759705,0.378212160335639,1.23165786914764,0.43839146485515,1.11218899690239,1.39300866608867,0.411564272815887,0.59710280045548,0,0,0,0.621377317606506,0.703578179943289,0.720248245844059,0.710234206755631,0.196764231747404,0.462801338662135,0.697601834251224,0,0.467061369468678,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,2.94405927989778,2.05809224758569,0,0,0.639864751605702,0,1.28867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0.569003702859245,0.342745537829186,0,0.814605311381257,0.193952487167626,0.350679099451593,0.569128834118316,0.738050739898011,0.627994911365499,0.740382983530803,0,0.166845105716094,0,0.224862112384854,0.405720242777006,0,0.25462585178142,0.287696137450811,0.648540907100142,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0.678980343100753,0.234690248288502,0.502518772325447,0.714130922658041,0,0.630540576424764,0.221464689648775,0.797273843287435,0.81931657357869,0.172684981865896,0.144649058581512,0,0,0,0,1.44495530989013,1.99259867206745,0.327869890753351,0,0.315508219416257,0.390438744296638,1.07711698866399,1.19484398976276,0.891194696329576,1.13230612315533,0.809621403349789,0.584511715822624,0.790575555893047,1.28528526568723,0.99358059645788,0.35613120733451,1.46598263418218,0.659880491890142,0,0.242780636154981,0.604647113929502,0,0,0.614870295887855,0,0.363533729477506,0,0,1.05418608574999,1.03135543248187,0.680879211507576,0.540183282093931,0.776152102696527,1.71469628025274,2.12808280370728,0.891844088010353,0.658196082408484,0.913394847343798,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.358117032009409,0,0.582961673259701,1.11255181206306,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0.419854356970974,0.138199973804424,1.90934123603023,1.42351197111511,0.813277868507395,0.216010681643603,0.418176592028937,0.218362563746178,0.674321731924103,0.247960367176008,0,0.259229946583586,0,0.56369293868419,0.598066184175915,0.330916980914195,0.388902376688095,0.645799117388655,0,0.704143431874524,0.911430693907651,0.209718688851422,0.966336483304024,0.576060012515731,0.316011120628178,0,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,0,0.549454872801795,0.214368379079066,0,3.95326289831947,2.76195141904306,4.01026859407578,3.60891682921744,2.05524755931193,3.7769694869485,0.675022500231806,1.35096360967266,1.35942722695261,4.65984280576638,0.207574695168353,0.399024873401031,0.853668028770671,0.243106717068294,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.832326981263301,0.574354689556133,0.952587382566147,0.347652977834566,0.77163688185482,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.470546902076653,0.25384382367503,0.365855945745545,0,0.950628796921032,0.561142271657738,0.355905054372522,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,0.999242311751784,0.233931608445408,0.429742108096597,1.3390183244819,0.220591419119515,0.231867835620421 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.881277725829041,0.608261587317087,0.367093504323363,0,2.18025156380447,1.09843091367236,1.1665793944457,0.839918529752175,0,0,0.725362142011344,0,0,0,0,1.61853168687678,1.05798195854407,1.90149421051854,0,0,0,0,0,1.79760066311043,2.30530983192933,1.65903379693564,1.4850653216486,0.630974884054146,1.14260393761521,1.98781686856452,1.22490799214954,1.0543001812006,1.83843757322004,4.40463523997555,1.27687338085188,2.15049146558741,2.50583946687368,2.92760459527711,2.6045668527838,0.837548997004143,0.56276261003168,1.5279824777681,2.94628585473668,2.42031857358475,1.4911955666024,0.075726193333184,0.453429360640713,0.579728977403356,0,0,0,0,0.448026887097336,0,0.170430322578058,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,0.346970653532272,0.913396434936424,0.461230994512117,0.452167921657868,0.587943535678524,0.376999773989026,0,0.433798070759735,0,0.161766849947409,0,0,1.86391761218122,1.17112318804619,3.77004072264219,0,0,0,0.127070227073065,1.9472783122627,2.28750301409313,2.01046963380583,2.9550134432687,1.79000820131231,2.90903262383384,2.59586020908412,0.712875546952214,0.124406970610093,0.252722758433675,1.26265113531884,1.56144531555244,0,0.180062129805349,1.35634336052144,0.816437989815934,0.896796041993948,0.937017245597288,1.03481348295606,1.29340795759705,0.378212160335639,1.23165786914764,0.43839146485515,1.11218899690239,1.39300866608867,0.411564272815887,0.59710280045548,0,0,0,0.621377317606506,0.703578179943289,0.720248245844059,0.710234206755631,0.196764231747404,0.462801338662135,0.697601834251224,0,0.467061369468678,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,2.94405927989778,2.05809224758569,0,0,0.639864751605702,0,1.28867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0.569003702859245,0.342745537829186,0,0.814605311381257,0.193952487167626,0.350679099451593,0.569128834118316,0.738050739898011,0.627994911365499,0.740382983530803,0,0.166845105716094,0,0.224862112384854,0.405720242777006,0,0.25462585178142,0.287696137450811,0.648540907100142,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0.678980343100753,0.234690248288502,0.502518772325447,0.714130922658041,0,0.630540576424764,0.221464689648775,0.797273843287435,0.81931657357869,0.172684981865896,0.144649058581512,0,0,0,0,1.44495530989013,1.99259867206745,0.327869890753351,0,0.315508219416257,0.390438744296638,1.07711698866399,1.19484398976276,0.891194696329576,1.13230612315533,0.809621403349789,0.584511715822624,0.790575555893047,1.28528526568723,0.99358059645788,0.35613120733451,1.46598263418218,0.659880491890142,0,0.242780636154981,0.604647113929502,0,0,0.614870295887855,0,0.363533729477506,0,0,1.05418608574999,1.03135543248187,0.680879211507576,0.540183282093931,0.776152102696527,1.71469628025274,2.12808280370728,0.891844088010353,0.658196082408484,0.913394847343798,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.358117032009409,0,0.582961673259701,1.11255181206306,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0.419854356970974,0.138199973804424,1.90934123603023,1.42351197111511,0.813277868507395,0.216010681643603,0.418176592028937,0.218362563746178,0.674321731924103,0.247960367176008,0,0.259229946583586,0,0.56369293868419,0.598066184175915,0.330916980914195,0.388902376688095,0.645799117388655,0,0.704143431874524,0.911430693907651,0.209718688851422,0.966336483304024,0.576060012515731,0.316011120628178,0,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,0,0.549454872801795,0.214368379079066,0,3.95326289831947,2.76195141904306,4.01026859407578,3.60891682921744,2.05524755931193,3.7769694869485,0.675022500231806,1.35096360967266,1.35942722695261,4.65984280576638,0.207574695168353,0.399024873401031,0.853668028770671,0.243106717068294,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.832326981263301,0.574354689556133,0.952587382566147,0.347652977834566,0.77163688185482,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.470546902076653,0.25384382367503,0.365855945745545,0,0.950628796921032,0.561142271657738,0.355905054372522,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,0.999242311751784,0.233931608445408,0.429742108096597,1.3390183244819,0.220591419119515,0.231867835620421 | ||
|short_description=p4@Grik5 | |||
}} | }} |
Latest revision as of 10:15, 26 September 2015
Short description: | p4@Grik5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Grik5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1841 |
Association with transcript: | -434bp_to_ENSMUST00000003468, NM_008168, uc009frh.2, uc009fri.2_5end |
EntrezGene: | Grik5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.60e-19 | 23 |
neuroblast (sensu Vertebrata) | 2.60e-19 | 23 |
neural cell | 3.75e-17 | 43 |
ectodermal cell | 1.40e-16 | 44 |
neurectodermal cell | 1.40e-16 | 44 |
neuron | 1.19e-15 | 33 |
neuronal stem cell | 1.19e-15 | 33 |
neuroblast | 1.19e-15 | 33 |
electrically signaling cell | 1.19e-15 | 33 |
electrically responsive cell | 3.06e-12 | 39 |
electrically active cell | 3.06e-12 | 39 |
embryonic cell | 1.30e-07 | 70 |