FFCP PHASE1:Mm9::chr12:121184577..121184606,+: Difference between revisions
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{{FFCP|EntrezGene=217951|HGNC=|MCL_coexpression_id=1|UniProt=D3YWQ9|association_with_transcript=142bp_to_ENSMUST00000058644,NM_001160385,uc011yvw.1_5end|description=CAGE_peak_1_at_Tmem196_5end|id=chr12:121184577..121184606,+|ontology_enrichment_celltype=CL:0000540!2.06e-09!33;CL:0000047!2.06e-09!33;CL:0000031!2.06e-09!33;CL:0000404!2.06e-09!33;CL:0000221!1.91e-07!44;CL:0000133!1.91e-07!44;CL:0000117!3.77e-07!23;CL:0000337!3.77e-07!23;CL:0002319!5.30e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,8.06e-08,23;CL:0000337,8.06e-08,23;CL:0002610,8.62e-08,3;CL:0002614,2.09e-07,3;CL:0000540,4.33e-07,33;CL:0000047,4.33e-07,33;CL:0000031,4.33e-07,33;CL:0000404,4.33e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.06e-21!73;UBERON:0005743!1.06e-21!73;UBERON:0000073!1.65e-21!75;UBERON:0001016!1.65e-21!75;UBERON:0004121!1.10e-19!102;UBERON:0000924!1.10e-19!102;UBERON:0006601!1.10e-19!102;UBERON:0002346!2.66e-18!71;UBERON:0003075!2.66e-18!71;UBERON:0007284!2.66e-18!71;UBERON:0001049!3.49e-16!52;UBERON:0005068!3.49e-16!52;UBERON:0006241!3.49e-16!52;UBERON:0007135!3.49e-16!52;UBERON:0000033!1.05e-15!63;UBERON:0000955!2.04e-15!50;UBERON:0006238!2.04e-15!50;UBERON:0002616!9.25e-15!49;UBERON:0002020!2.98e-13!34;UBERON:0003056!1.73e-12!49;UBERON:0003080!4.78e-12!40;UBERON:0002780!2.31e-11!39;UBERON:0001890!2.31e-11!39;UBERON:0006240!2.31e-11!39;UBERON:0002791!1.48e-10!29;UBERON:0003528!1.48e-10!29;UBERON:0001893!1.48e-10!29;UBERON:0002021!4.93e-09!10;UBERON:0000411!4.93e-09!10;UBERON:0001950!4.93e-09!10;UBERON:0002619!6.45e-08!17;UBERON:0007811!4.22e-07!86;UBERON:0000956!6.22e-07!21;UBERON:0001869!6.22e-07!21;UBERON:0000203!6.22e-07!21;UBERON:0000153!6.28e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.58e-26,73;UBERON:0000073,1.60e-26,54;UBERON:0001016,1.25e-25,75;UBERON:0002021,1.35e-23,10;UBERON:0000411,1.35e-23,10;UBERON:0001950,1.35e-23,10;UBERON:0001049,2.66e-23,52;UBERON:0005068,2.66e-23,52;UBERON:0006241,2.66e-23,52;UBERON:0007135,2.66e-23,52;UBERON:0002020,6.06e-21,34;UBERON:0004121,4.24e-20,95;UBERON:0000924,4.24e-20,95;UBERON:0006601,4.24e-20,95;UBERON:0000955,4.35e-20,47;UBERON:0006238,4.35e-20,47;UBERON:0002616,1.33e-18,46;UBERON:0003528,6.64e-18,29;UBERON:0002791,6.64e-18,29;UBERON:0001893,6.64e-18,29;UBERON:0002346,8.64e-18,64;UBERON:0003075,8.64e-18,64;UBERON:0007284,8.64e-18,64;UBERON:0003080,1.25e-17,40;UBERON:0010371,3.31e-16,73;UBERON:0002780,4.84e-16,39;UBERON:0001890,4.84e-16,39;UBERON:0006240,4.84e-16,39;UBERON:0002619,1.51e-15,17;UBERON:0000956,1.32e-14,21;UBERON:0001869,1.32e-14,21;UBERON:0000203,1.32e-14,21;UBERON:0003056,1.58e-13,49;UBERON:0010314,1.04e-12,92;UBERON:0002950,1.16e-09,4;UBERON:0001891,1.16e-09,4;UBERON:0009616,1.16e-09,4;UBERON:0010286,1.16e-09,4;UBERON:0000025,3.02e-08,114;UBERON:0004111,4.45e-08,122;UBERON:0004684,8.62e-08,3;UBERON:0002275,8.62e-08,3;UBERON:0002038,2.09e-07,3;UBERON:0009663,2.09e-07,3;UBERON:0009661,2.09e-07,3;UBERON:0000125,2.09e-07,3;UBERON:0002308,2.09e-07,3|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0.856952953211411,1.54607978666129,0.244981598429908,0.287536413054709,0,7.70811166995721,2.42605942361857,2.61131106535614,0.395658863190582,0.274462930807229,0.52091337055676,2.51264699101243,2.25105044012672,3.81995619442025,2.06240009831567,1.56608848879013,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0,0,0,0.22836775943812,0,1.63286352971307,0.520455980298408,0,0.230615497256059,0.753613202763113,0.587943535678524,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,5.39246301857362,2.74500361691176,0.753926112677186,5.38855392596057,7.67146371990992,2.90903262383384,4.05603157669394,2.74966282395854,0.124406970610093,0,0.210441855886474,0.520481771850815,0,0.180062129805349,0.60281927134286,0.748401490664606,0,0.374806898238915,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0,0.402619256281115,1.68231958851302,0.92614151141356,0,0,0,0,0.515469845288373,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,5.45872005958493,3.6335622843583,0,0,0,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.849229592366497,0.404810701674894,1.46127928955656,1.18586333383957,2.89189184779626,0,0.178065603667255,0.81443479676788,0.494910368917606,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0.727067458955011,0,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,4.07935664423121,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.436725127492355,0.269728692769641,0,0,0.129614973291793,0,0,0.448549638131936,0.165458490457098,1.36115831840833,0.645799117388655,0.506868376472335,0.704143431874524,0.651021924219751,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09890974560359,0,0,5.0827665835536,4.60325236507177,3.43737308063638,2.57779773515531,4.7955776383945,6.7985450765073,3.37511250115903,5.85417564191487,6.79713613476307,6.73088405277366,0.31136204275253,0.399024873401031,1.02440163452481,0.729320151204882,0.628839487883947,0.183843508450014,1.55572709461131,0.824140228955577,0,0.505394423527595,0.25347929989024,0.188626341386076,0.842773567228942,0.320125762024346,0.34461281373368,0.476293691283074,0.579421629724277,0.578727661391115,0.824171801606613,0.588795680537589,0.685738504770831,0.354951612318675,0,0.872078499793971,0.188218760830661,0.676916863133412,0.548783918618318,0.263069711437843,0.271608227691724,0,0.355905054372522,0.591026894253381,0.818462086339379,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0,0.382576664137687,0,0|short_description=p1@Tmem196}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217951 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=D3YWQ9 | |||
|association_with_transcript=142bp_to_ENSMUST00000058644,NM_001160385,uc011yvw.1_5end | |||
|cluster_id=chr12:121184577..121184606,+ | |||
|description=CAGE_peak_1_at_Tmem196_5end | |||
|id=chr12:121184577..121184606,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.06e-09!33;CL:0000047!2.06e-09!33;CL:0000031!2.06e-09!33;CL:0000404!2.06e-09!33;CL:0000221!1.91e-07!44;CL:0000133!1.91e-07!44;CL:0000117!3.77e-07!23;CL:0000337!3.77e-07!23;CL:0002319!5.30e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.06e-08,23;CL:0000337,8.06e-08,23;CL:0002610,8.62e-08,3;CL:0002614,2.09e-07,3;CL:0000540,4.33e-07,33;CL:0000047,4.33e-07,33;CL:0000031,4.33e-07,33;CL:0000404,4.33e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.06e-21!73;UBERON:0005743!1.06e-21!73;UBERON:0000073!1.65e-21!75;UBERON:0001016!1.65e-21!75;UBERON:0004121!1.10e-19!102;UBERON:0000924!1.10e-19!102;UBERON:0006601!1.10e-19!102;UBERON:0002346!2.66e-18!71;UBERON:0003075!2.66e-18!71;UBERON:0007284!2.66e-18!71;UBERON:0001049!3.49e-16!52;UBERON:0005068!3.49e-16!52;UBERON:0006241!3.49e-16!52;UBERON:0007135!3.49e-16!52;UBERON:0000033!1.05e-15!63;UBERON:0000955!2.04e-15!50;UBERON:0006238!2.04e-15!50;UBERON:0002616!9.25e-15!49;UBERON:0002020!2.98e-13!34;UBERON:0003056!1.73e-12!49;UBERON:0003080!4.78e-12!40;UBERON:0002780!2.31e-11!39;UBERON:0001890!2.31e-11!39;UBERON:0006240!2.31e-11!39;UBERON:0002791!1.48e-10!29;UBERON:0003528!1.48e-10!29;UBERON:0001893!1.48e-10!29;UBERON:0002021!4.93e-09!10;UBERON:0000411!4.93e-09!10;UBERON:0001950!4.93e-09!10;UBERON:0002619!6.45e-08!17;UBERON:0007811!4.22e-07!86;UBERON:0000956!6.22e-07!21;UBERON:0001869!6.22e-07!21;UBERON:0000203!6.22e-07!21;UBERON:0000153!6.28e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.58e-26,73;UBERON:0000073,1.60e-26,54;UBERON:0001016,1.25e-25,75;UBERON:0002021,1.35e-23,10;UBERON:0000411,1.35e-23,10;UBERON:0001950,1.35e-23,10;UBERON:0001049,2.66e-23,52;UBERON:0005068,2.66e-23,52;UBERON:0006241,2.66e-23,52;UBERON:0007135,2.66e-23,52;UBERON:0002020,6.06e-21,34;UBERON:0004121,4.24e-20,95;UBERON:0000924,4.24e-20,95;UBERON:0006601,4.24e-20,95;UBERON:0000955,4.35e-20,47;UBERON:0006238,4.35e-20,47;UBERON:0002616,1.33e-18,46;UBERON:0003528,6.64e-18,29;UBERON:0002791,6.64e-18,29;UBERON:0001893,6.64e-18,29;UBERON:0002346,8.64e-18,64;UBERON:0003075,8.64e-18,64;UBERON:0007284,8.64e-18,64;UBERON:0003080,1.25e-17,40;UBERON:0010371,3.31e-16,73;UBERON:0002780,4.84e-16,39;UBERON:0001890,4.84e-16,39;UBERON:0006240,4.84e-16,39;UBERON:0002619,1.51e-15,17;UBERON:0000956,1.32e-14,21;UBERON:0001869,1.32e-14,21;UBERON:0000203,1.32e-14,21;UBERON:0003056,1.58e-13,49;UBERON:0010314,1.04e-12,92;UBERON:0002950,1.16e-09,4;UBERON:0001891,1.16e-09,4;UBERON:0009616,1.16e-09,4;UBERON:0010286,1.16e-09,4;UBERON:0000025,3.02e-08,114;UBERON:0004111,4.45e-08,122;UBERON:0004684,8.62e-08,3;UBERON:0002275,8.62e-08,3;UBERON:0002038,2.09e-07,3;UBERON:0009663,2.09e-07,3;UBERON:0009661,2.09e-07,3;UBERON:0000125,2.09e-07,3;UBERON:0002308,2.09e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0.856952953211411,1.54607978666129,0.244981598429908,0.287536413054709,0,7.70811166995721,2.42605942361857,2.61131106535614,0.395658863190582,0.274462930807229,0.52091337055676,2.51264699101243,2.25105044012672,3.81995619442025,2.06240009831567,1.56608848879013,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0,0,0,0.22836775943812,0,1.63286352971307,0.520455980298408,0,0.230615497256059,0.753613202763113,0.587943535678524,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,5.39246301857362,2.74500361691176,0.753926112677186,5.38855392596057,7.67146371990992,2.90903262383384,4.05603157669394,2.74966282395854,0.124406970610093,0,0.210441855886474,0.520481771850815,0,0.180062129805349,0.60281927134286,0.748401490664606,0,0.374806898238915,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0,0.402619256281115,1.68231958851302,0.92614151141356,0,0,0,0,0.515469845288373,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,5.45872005958493,3.6335622843583,0,0,0,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.849229592366497,0.404810701674894,1.46127928955656,1.18586333383957,2.89189184779626,0,0.178065603667255,0.81443479676788,0.494910368917606,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0.727067458955011,0,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,4.07935664423121,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.436725127492355,0.269728692769641,0,0,0.129614973291793,0,0,0.448549638131936,0.165458490457098,1.36115831840833,0.645799117388655,0.506868376472335,0.704143431874524,0.651021924219751,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09890974560359,0,0,5.0827665835536,4.60325236507177,3.43737308063638,2.57779773515531,4.7955776383945,6.7985450765073,3.37511250115903,5.85417564191487,6.79713613476307,6.73088405277366,0.31136204275253,0.399024873401031,1.02440163452481,0.729320151204882,0.628839487883947,0.183843508450014,1.55572709461131,0.824140228955577,0,0.505394423527595,0.25347929989024,0.188626341386076,0.842773567228942,0.320125762024346,0.34461281373368,0.476293691283074,0.579421629724277,0.578727661391115,0.824171801606613,0.588795680537589,0.685738504770831,0.354951612318675,0,0.872078499793971,0.188218760830661,0.676916863133412,0.548783918618318,0.263069711437843,0.271608227691724,0,0.355905054372522,0.591026894253381,0.818462086339379,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0,0.382576664137687,0,0 | |||
|short_description=p1@Tmem196 | |||
}} |
Latest revision as of 11:05, 26 September 2015
Short description: | p1@Tmem196 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem196_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 142bp_to_ENSMUST00000058644, NM_001160385, uc011yvw.1_5end |
EntrezGene: | Tmem196 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.06e-08 | 23 |
neuroblast (sensu Vertebrata) | 8.06e-08 | 23 |
raphe nuclei neuron | 8.62e-08 | 3 |
neuron of the substantia nigra | 2.09e-07 | 3 |
neuron | 4.33e-07 | 33 |
neuronal stem cell | 4.33e-07 | 33 |
neuroblast | 4.33e-07 | 33 |
electrically signaling cell | 4.33e-07 | 33 |