FFCP PHASE1:Mm9::chr6:117856915..117856940,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:117856915..117856940,+ to FFCP PHASE1:Mm9::chr6:117856915..117856940,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=98758 | |EntrezGene=98758 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1754 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z2X1 | |UniProt=Q9Z2X1 | ||
|association_with_transcript=115bp_to_ENSMUST00000163168,ENSMUST00000170346,NM_001166430,NM_001166431,uc009dlf.2,uc012eqy.1_5end | |||
|cluster_id=chr6:117856915..117856940,+ | |||
|description=CAGE_peak_10_at_Hnrnpf_5end | |||
|id=chr6:117856915..117856940,+ | |||
|ontology_enrichment_celltype=CL:0000063!4.18e-13!66;CL:0002320!1.90e-08!46;CL:0000134!1.90e-08!46;CL:0000219!2.84e-08!54;CL:0000738!3.01e-07!17;CL:0002087!3.01e-07!17;CL:0000838!4.50e-07!12;CL:0000988!6.39e-07!32;CL:0002032!6.39e-07!32;CL:0000037!6.39e-07!32;CL:0000566!6.39e-07!32;CL:0000837!6.39e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,5.18e-09,46;CL:0000134,5.18e-09,46;CL:0000219,6.28e-09,54;CL:0000988,1.98e-07,32;CL:0002032,1.98e-07,32;CL:0000037,1.98e-07,32;CL:0000837,1.98e-07,32;CL:0000738,2.46e-07,17;CL:0002087,2.46e-07,17;CL:0000838,3.70e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.60e-09!48;UBERON:0002384!1.90e-08!46;UBERON:0001007!3.59e-08!128;UBERON:0001555!3.59e-08!128;UBERON:0007026!3.59e-08!128;UBERON:0002390!4.26e-08!45;UBERON:0003061!4.26e-08!45;UBERON:0004119!4.83e-08!130;UBERON:0000925!4.83e-08!130;UBERON:0006595!4.83e-08!130;UBERON:0004921!1.45e-07!126;UBERON:0004185!1.45e-07!126;UBERON:0002204!6.63e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.81e-09,48;UBERON:0002405,2.81e-09,48;UBERON:0001007,4.07e-09,116;UBERON:0001555,4.07e-09,116;UBERON:0007026,4.07e-09,116;UBERON:0002384,5.18e-09,46;UBERON:0004119,6.65e-09,118;UBERON:0000925,6.65e-09,118;UBERON:0006595,6.65e-09,118;UBERON:0005409,7.79e-09,47;UBERON:0004921,1.84e-08,114;UBERON:0002390,4.71e-08,45;UBERON:0003061,4.71e-08,45;UBERON:0000160,5.67e-08,31 | |||
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| ||
|short_description=p10@Hnrnpf | |||
}} | }} |
Latest revision as of 12:51, 26 September 2015
Short description: | p10@Hnrnpf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Hnrnpf_5end |
Coexpression cluster: | MCL_coexpression_mm9:1754 |
Association with transcript: | 115bp_to_ENSMUST00000163168, ENSMUST00000170346, NM_001166430, NM_001166431, uc009dlf.2, uc012eqy.1_5end |
EntrezGene: | Hnrnpf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 5.18e-09 | 46 |
mesenchymal cell | 5.18e-09 | 46 |
motile cell | 6.28e-09 | 54 |
hematopoietic cell | 1.98e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.98e-07 | 32 |
hematopoietic stem cell | 1.98e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.98e-07 | 32 |
leukocyte | 2.46e-07 | 17 |
nongranular leukocyte | 2.46e-07 | 17 |
lymphoid lineage restricted progenitor cell | 3.70e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.81e-09 | 48 |
immune system | 2.81e-09 | 48 |
digestive system | 4.07e-09 | 116 |
digestive tract | 4.07e-09 | 116 |
primitive gut | 4.07e-09 | 116 |
connective tissue | 5.18e-09 | 46 |
endoderm-derived structure | 6.65e-09 | 118 |
endoderm | 6.65e-09 | 118 |
presumptive endoderm | 6.65e-09 | 118 |
gastrointestinal system | 7.79e-09 | 47 |
subdivision of digestive tract | 1.84e-08 | 114 |
hematopoietic system | 4.71e-08 | 45 |
blood island | 4.71e-08 | 45 |
intestine | 5.67e-08 | 31 |