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FFCP PHASE1:Mm9::chr6:121081068..121081083,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=194401
|EntrezGene=194401
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-51bp_to_uc009dob.1_5end
|association_with_transcript=-51bp_to_uc009dob.1_5end
|cluster_id=chr6:121081068..121081083,-
|description=CAGE_peak_3_at_Mical3_5end
|description=CAGE_peak_3_at_Mical3_5end
|id=chr6:121081068..121081083,-
|id=chr6:121081068..121081083,-
|ontology_enrichment_celltype=CL:0000117!6.22e-15!23;CL:0000337!6.22e-15!23;CL:0000540!7.61e-12!33;CL:0000047!7.61e-12!33;CL:0000031!7.61e-12!33;CL:0000404!7.61e-12!33;CL:0000393!3.03e-08!39;CL:0000211!3.03e-08!39;CL:0002319!3.34e-08!43;CL:0000221!3.35e-08!44;CL:0000133!3.35e-08!44
|ontology_enrichment_celltype=CL:0000117!6.22e-15!23;CL:0000337!6.22e-15!23;CL:0000540!7.61e-12!33;CL:0000047!7.61e-12!33;CL:0000031!7.61e-12!33;CL:0000404!7.61e-12!33;CL:0000393!3.03e-08!39;CL:0000211!3.03e-08!39;CL:0002319!3.34e-08!43;CL:0000221!3.35e-08!44;CL:0000133!3.35e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-21,23;CL:0000337,1.02e-21,23;CL:0000540,3.22e-14,33;CL:0000047,3.22e-14,33;CL:0000031,3.22e-14,33;CL:0000404,3.22e-14,33;CL:0000393,5.72e-11,39;CL:0000211,5.72e-11,39;CL:0002319,2.62e-10,43;CL:0000221,6.44e-10,44;CL:0000133,6.44e-10,44;CL:0002609,2.47e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.44e-29!71;UBERON:0003075!1.44e-29!71;UBERON:0007284!1.44e-29!71;UBERON:0001049!4.16e-29!52;UBERON:0005068!4.16e-29!52;UBERON:0006241!4.16e-29!52;UBERON:0007135!4.16e-29!52;UBERON:0001017!1.38e-28!73;UBERON:0005743!1.38e-28!73;UBERON:0000955!2.17e-28!50;UBERON:0006238!2.17e-28!50;UBERON:0002616!1.80e-27!49;UBERON:0000073!4.96e-27!75;UBERON:0001016!4.96e-27!75;UBERON:0000033!5.46e-27!63;UBERON:0004121!6.50e-25!102;UBERON:0000924!6.50e-25!102;UBERON:0006601!6.50e-25!102;UBERON:0003056!1.42e-23!49;UBERON:0003080!4.08e-23!40;UBERON:0002780!2.85e-22!39;UBERON:0001890!2.85e-22!39;UBERON:0006240!2.85e-22!39;UBERON:0002020!9.17e-22!34;UBERON:0002791!9.62e-19!29;UBERON:0003528!9.62e-19!29;UBERON:0001893!9.62e-19!29;UBERON:0007811!3.66e-14!86;UBERON:0000956!1.81e-13!21;UBERON:0001869!1.81e-13!21;UBERON:0000203!1.81e-13!21;UBERON:0000153!1.50e-12!94;UBERON:0002619!6.01e-11!17;UBERON:0002021!3.30e-09!10;UBERON:0000411!3.30e-09!10;UBERON:0001950!3.30e-09!10
|ontology_enrichment_uberon=UBERON:0002346!1.44e-29!71;UBERON:0003075!1.44e-29!71;UBERON:0007284!1.44e-29!71;UBERON:0001049!4.16e-29!52;UBERON:0005068!4.16e-29!52;UBERON:0006241!4.16e-29!52;UBERON:0007135!4.16e-29!52;UBERON:0001017!1.38e-28!73;UBERON:0005743!1.38e-28!73;UBERON:0000955!2.17e-28!50;UBERON:0006238!2.17e-28!50;UBERON:0002616!1.80e-27!49;UBERON:0000073!4.96e-27!75;UBERON:0001016!4.96e-27!75;UBERON:0000033!5.46e-27!63;UBERON:0004121!6.50e-25!102;UBERON:0000924!6.50e-25!102;UBERON:0006601!6.50e-25!102;UBERON:0003056!1.42e-23!49;UBERON:0003080!4.08e-23!40;UBERON:0002780!2.85e-22!39;UBERON:0001890!2.85e-22!39;UBERON:0006240!2.85e-22!39;UBERON:0002020!9.17e-22!34;UBERON:0002791!9.62e-19!29;UBERON:0003528!9.62e-19!29;UBERON:0001893!9.62e-19!29;UBERON:0007811!3.66e-14!86;UBERON:0000956!1.81e-13!21;UBERON:0001869!1.81e-13!21;UBERON:0000203!1.81e-13!21;UBERON:0000153!1.50e-12!94;UBERON:0002619!6.01e-11!17;UBERON:0002021!3.30e-09!10;UBERON:0000411!3.30e-09!10;UBERON:0001950!3.30e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.86e-40,54;UBERON:0001049,1.14e-37,52;UBERON:0005068,1.14e-37,52;UBERON:0006241,1.14e-37,52;UBERON:0007135,1.14e-37,52;UBERON:0001017,4.57e-34,73;UBERON:0002020,5.54e-34,34;UBERON:0000955,4.06e-33,47;UBERON:0006238,4.06e-33,47;UBERON:0001016,9.81e-33,75;UBERON:0002616,9.83e-32,46;UBERON:0002346,1.03e-30,64;UBERON:0003075,1.03e-30,64;UBERON:0007284,1.03e-30,64;UBERON:0003528,4.76e-29,29;UBERON:0002791,4.76e-29,29;UBERON:0001893,4.76e-29,29;UBERON:0003080,1.25e-27,40;UBERON:0002780,2.38e-26,39;UBERON:0001890,2.38e-26,39;UBERON:0006240,2.38e-26,39;UBERON:0010371,3.71e-25,73;UBERON:0004121,1.33e-23,95;UBERON:0000924,1.33e-23,95;UBERON:0006601,1.33e-23,95;UBERON:0003056,7.31e-22,49;UBERON:0000956,1.87e-20,21;UBERON:0001869,1.87e-20,21;UBERON:0000203,1.87e-20,21;UBERON:0010314,4.50e-17,92;UBERON:0002619,2.35e-16,17;UBERON:0002021,5.29e-14,10;UBERON:0000411,5.29e-14,10;UBERON:0001950,5.29e-14,10;UBERON:0000025,2.43e-11,114;UBERON:0003076,4.77e-10,12;UBERON:0003057,4.77e-10,12;UBERON:0004111,9.26e-10,122;UBERON:0002420,1.38e-09,8;UBERON:0007245,1.38e-09,8;UBERON:0010009,1.38e-09,8;UBERON:0010011,1.38e-09,8;UBERON:0000454,1.38e-09,8;UBERON:0000369,3.80e-07,5;UBERON:0002435,3.80e-07,5;UBERON:0000204,3.80e-07,5;UBERON:0010082,3.80e-07,5
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,3.43937983461316,7.40587370980846,0.633831403506179,0,0,0,0,0,0,0,2.48855069540346,3.24014251996058,2.3135745748652,1.71390590642282,2.87129103237098,4.04219637409348,2.97120960156533,5.51531271966013,6.60695285996332,2.55374676170375,2.61131106535614,5.27545150920775,4.57438218012048,3.64639359389732,1.67509799400829,1.68828783009504,3.66715794664344,2.35702868378934,2.84743361598206,3.35519002485541,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.230615497256059,0.301445281105245,0.587943535678524,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0,0,3.80615036115011,3.77004072264219,0.255457055208591,0,0,0,7.04016005202667,6.40500843946077,6.15706325353036,8.69121600961382,7.92717917724025,4.36354893575076,5.51620294430376,0.101839363850316,0,0,0,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,0.544291993210623,1.15302348256365,0.655912071918102,0.517406741478031,0,0.189106080167819,0.527853372491847,0,0,0,0.205782136407943,0,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,4.6263788684108,2.6755199218614,0,0,0,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,3.53211297973142,2.10981035865966,0,0,0.315508219416257,0.390438744296638,1.07711698866399,0,0,0,0.404810701674894,0,0.395287777946524,10.2822821254978,1.70328102249922,0,0,2.47455184458803,0,0.242780636154981,0,0,0,0,0.258428293168221,0,1.42598951353889,0,0,1.03135543248187,2.04263763452273,0.18006109403131,0.776152102696527,0.857348140126369,0.532020700926821,1.42695054081656,0.658196082408484,0.913394847343798,0,0,0.220528398054962,0.32977250588296,0,0.180938774784468,0.119372344003136,0,0.291480836629851,1.48340241608408,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.418176592028937,0,0,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,1.64836461840539,0.214368379079066,0,7.34177395402186,6.90487854760765,10.8850147553485,3.78077001156113,6.16574267793578,12.8416962556249,6.75022500231806,9.90706647093285,6.79713613476307,5.69536342927002,0.31136204275253,0.399024873401031,1.87806966329548,0.729320151204882,1.04806581313991,0.919217542250071,0.888986911206461,1.03017528619447,1.60459604795908,0.758091635291392,1.77435509923168,1.50901073108861,1.03005658216871,1.08842759088278,0.976402972245426,0.476293691283074,0.927074607558844,0.578727661391115,2.47251540481984,1.47198920134397,1.71434626192708,0.532427418478012,1.1921809497366,1.45346416632329,1.03520318456864,0.846146078916765,1.28049581010941,1.05227884575137,0.543216455383447,1.12228454331548,0.474540072496697,0.788035859004508,1.22769312950907,0.77468420592983,1.35034627686799,4.49659040288303,1.40358965067245,0,0,0,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,3.43937983461316,7.40587370980846,0.633831403506179,0,0,0,0,0,0,0,2.48855069540346,3.24014251996058,2.3135745748652,1.71390590642282,2.87129103237098,4.04219637409348,2.97120960156533,5.51531271966013,6.60695285996332,2.55374676170375,2.61131106535614,5.27545150920775,4.57438218012048,3.64639359389732,1.67509799400829,1.68828783009504,3.66715794664344,2.35702868378934,2.84743361598206,3.35519002485541,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.230615497256059,0.301445281105245,0.587943535678524,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0,0,3.80615036115011,3.77004072264219,0.255457055208591,0,0,0,7.04016005202667,6.40500843946077,6.15706325353036,8.69121600961382,7.92717917724025,4.36354893575076,5.51620294430376,0.101839363850316,0,0,0,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,0.544291993210623,1.15302348256365,0.655912071918102,0.517406741478031,0,0.189106080167819,0.527853372491847,0,0,0,0.205782136407943,0,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,4.6263788684108,2.6755199218614,0,0,0,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,3.53211297973142,2.10981035865966,0,0,0.315508219416257,0.390438744296638,1.07711698866399,0,0,0,0.404810701674894,0,0.395287777946524,10.2822821254978,1.70328102249922,0,0,2.47455184458803,0,0.242780636154981,0,0,0,0,0.258428293168221,0,1.42598951353889,0,0,1.03135543248187,2.04263763452273,0.18006109403131,0.776152102696527,0.857348140126369,0.532020700926821,1.42695054081656,0.658196082408484,0.913394847343798,0,0,0.220528398054962,0.32977250588296,0,0.180938774784468,0.119372344003136,0,0.291480836629851,1.48340241608408,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.418176592028937,0,0,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,1.64836461840539,0.214368379079066,0,7.34177395402186,6.90487854760765,10.8850147553485,3.78077001156113,6.16574267793578,12.8416962556249,6.75022500231806,9.90706647093285,6.79713613476307,5.69536342927002,0.31136204275253,0.399024873401031,1.87806966329548,0.729320151204882,1.04806581313991,0.919217542250071,0.888986911206461,1.03017528619447,1.60459604795908,0.758091635291392,1.77435509923168,1.50901073108861,1.03005658216871,1.08842759088278,0.976402972245426,0.476293691283074,0.927074607558844,0.578727661391115,2.47251540481984,1.47198920134397,1.71434626192708,0.532427418478012,1.1921809497366,1.45346416632329,1.03520318456864,0.846146078916765,1.28049581010941,1.05227884575137,0.543216455383447,1.12228454331548,0.474540072496697,0.788035859004508,1.22769312950907,0.77468420592983,1.35034627686799,4.49659040288303,1.40358965067245,0,0,0,0.231867835620421
|short_description=p3@Mical3
|short_description=p3@Mical3
}}
}}

Latest revision as of 14:03, 26 September 2015

Short description:p3@Mical3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Mical3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -51bp_to_uc009dob.1_5end
EntrezGene:Mical3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Mical3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F16.16
cortex, adult.CNhs10473.12-14D58.69
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.86e-4054
neural tube1.14e-3752
neural rod1.14e-3752
future spinal cord1.14e-3752
neural keel1.14e-3752
central nervous system4.57e-3473
gray matter5.54e-3434
brain4.06e-3347
future brain4.06e-3347
nervous system9.81e-3375
regional part of brain9.83e-3246
neurectoderm1.03e-3064
neural plate1.03e-3064
presumptive neural plate1.03e-3064
brain grey matter4.76e-2929
regional part of telencephalon4.76e-2929
telencephalon4.76e-2929
anterior neural tube1.25e-2740
regional part of forebrain2.38e-2639
forebrain2.38e-2639
future forebrain2.38e-2639
ecto-epithelium3.71e-2573
ectoderm-derived structure1.33e-2395
ectoderm1.33e-2395
presumptive ectoderm1.33e-2395
pre-chordal neural plate7.31e-2249
cerebral cortex1.87e-2021
cerebral hemisphere1.87e-2021
pallium1.87e-2021
structure with developmental contribution from neural crest4.50e-1792
regional part of cerebral cortex2.35e-1617
occipital lobe5.29e-1410
visual cortex5.29e-1410
neocortex5.29e-1410
tube2.43e-11114
posterior neural tube4.77e-1012
chordal neural plate4.77e-1012
anatomical conduit9.26e-10122
basal ganglion1.38e-098
nuclear complex of neuraxis1.38e-098
aggregate regional part of brain1.38e-098
collection of basal ganglia1.38e-098
cerebral subcortex1.38e-098
corpus striatum3.80e-075
striatum3.80e-075
ventral part of telencephalon3.80e-075
future corpus striatum3.80e-075
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