FFCP PHASE1:Mm9::chr6:122258971..122258984,+: Difference between revisions
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{{FFCP|EntrezGene=17113|HGNC=|UniProt=|association_with_transcript=-32bp_to_ENSMUST00000123093_5end|description=CAGE_peak_2_at_M6pr_5end|id=chr6:122258971..122258984,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!7.89e-15!47;UBERON:0005172!7.07e-13!49;UBERON:0005173!7.07e-13!49;UBERON:0002417!7.07e-13!49;UBERON:0000916!7.07e-13!49;UBERON:0009569!4.52e-12!66;UBERON:0002365!3.15e-11!25;UBERON:0002330!3.15e-11!25;UBERON:0002107!5.48e-11!22;UBERON:0007499!5.48e-11!22;UBERON:0006925!5.48e-11!22;UBERON:0009497!5.48e-11!22;UBERON:0000015!5.48e-11!22;UBERON:0002423!5.48e-11!22;UBERON:0006235!5.48e-11!22;UBERON:0008835!5.48e-11!22;UBERON:0003894!5.48e-11!22;UBERON:0004161!5.48e-11!22;UBERON:0008836!5.48e-11!22;UBERON:0009854!7.48e-11!23;UBERON:0009856!7.48e-11!23;UBERON:0002100!2.05e-09!98;UBERON:0003104!7.38e-08!131;UBERON:0009142!7.38e-08!131;UBERON:0005177!8.49e-08!85;UBERON:0002405!2.74e-07!70;UBERON:0000490!6.57e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0005256,5.17e-16,45;UBERON:0005172,1.13e-12,49;UBERON:0005173,1.13e-12,49;UBERON:0002417,1.13e-12,49;UBERON:0000916,1.13e-12,49;UBERON:0003104,3.22e-12,61;UBERON:0009142,3.22e-12,61;UBERON:0009569,8.55e-12,66;UBERON:0002365,1.80e-11,25;UBERON:0002330,1.80e-11,25;UBERON:0002107,3.17e-11,22;UBERON:0007499,3.17e-11,22;UBERON:0006925,3.17e-11,22;UBERON:0009497,3.17e-11,22;UBERON:0000015,3.17e-11,22;UBERON:0002423,3.17e-11,22;UBERON:0006235,3.17e-11,22;UBERON:0008835,3.17e-11,22;UBERON:0003894,3.17e-11,22;UBERON:0004161,3.17e-11,22;UBERON:0008836,3.17e-11,22;UBERON:0009854,4.35e-11,23;UBERON:0009856,4.35e-11,23;UBERON:0002100,1.11e-10,90;UBERON:0005177,1.13e-08,79;UBERON:0004119,1.38e-08,118;UBERON:0000925,1.38e-08,118;UBERON:0006595,1.38e-08,118;UBERON:0001007,6.29e-08,116;UBERON:0001555,6.29e-08,116;UBERON:0007026,6.29e-08,116;UBERON:0004921,2.10e-07,114;UBERON:0000490,3.93e-07,66;UBERON:0002530,4.88e-07,65|phase1_expression=0.960893082628764,1.74487703819681,2.27499619694768,2.11724947914781,0,1.51091344720701,3.50418960893289,1.03298658753261,26.609068486665,24.5767752638093,12.3276937122364,11.1681022593471,0.342401459862411,0.786783621770977,3.33109761815663,2.22722794128809,0.699561878128147,1.89277299214943,1.64537320326887,0.42438965179803,1.78590909317247,0.992909512008853,1.30599894569468,2.71987118748791,3.21172993494038,0,0.430761996159075,1.939241094173,2.28028103347649,2.01624103807945,5.09980174507201,1.90509202037889,1.23012957516914,0,2.88851619751275,2.49351968037739,1.83752420636132,2.09265815368454,1.5626706890476,1.57057123192139,1.17646297606203,2.73218193983378,0.971020706062307,2.89562681343828,2.63580021170738,3.48738829107195,0.782391344348039,0.872100625521786,2.41654801007919,2.52758868796568,1.53985063787899,0,1.17447824240415,0.725362142011344,0.336093799142464,3.8588915405392,1.43266719969378,3.09403255366465,1.01158230429799,2.11596391708813,0.633831403506179,0.677689064138264,0.889294796111139,3.1496490104849,0.988866362566974,2.8419204597844,1.79760066311043,0.768436610643109,0.518448061542388,0.540023753326763,0.420649922702764,1.71390590642282,1.98781686856452,0.367472397644862,0.191690942036473,0,0,1.40456071893706,1.53606533256243,0.263772575460388,0.823388792421687,1.56274011167028,1.67509799400829,4.50210088025344,3.36156145108982,0.589257170947335,0.854230084794618,0.372798891650601,3.40767869999328,1.66257432234928,2.02905142091174,7.74381489283248,25.1589393471868,7.01614149129162,9.09686984426737,6.2723764193627,1.82577746171277,2.55645483867087,4.41636207824877,2.12003744706204,1.69012103732017,1.28326477414318,7.64415719119937,0,4.5463118612355,3.80039798212648,5.05524445014783,3.65388415100992,2.33044095282455,4.00793775475027,3.99016251562112,3.04465478312141,5.30415643688935,4.82312449768392,4.58595957829249,1.75933227861546,1.23597483867187,3.32578520915797,2.65383165584962,0.970601099684455,1.32504911076236,0.484875253135222,1.86391761218122,0.878342391034642,2.09446706813455,2.04365644166873,2.39630249011841,1.79970819298022,3.43089613097275,2.09706895166752,3.66000482254901,0.753926112677186,2.25971616249959,1.79000820131231,1.66230435647648,1.62241263067758,2.03678727700633,1.8661045591514,2.27450482590307,12.8369532090749,0.390361328888111,0.229902104433473,0.180062129805349,1.35634336052144,0.884474488967262,0.640568601424249,1.03071897015702,2.32833033665114,1.29340795759705,1.51284864134255,0.527853372491847,1.09597866213787,1.11218899690239,0.348252166522167,1.02891068203972,0.199034266818493,2.1066395619397,2.57347907114715,4.26245249093389,1.24275463521301,0.703578179943289,0.900310307305074,0.710234206755631,0.196764231747404,0.462801338662135,0,0.536546802799238,0.583826711835847,0.329119699826961,0.985004784474571,0.729619285912702,0.730999937126662,1.09775057645525,0.671032093801859,1.89260953707715,0.92614151141356,1.32167513193519,2.11560453330835,1.2797295032114,0.23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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17113 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-32bp_to_ENSMUST00000123093_5end | |||
|cluster_id=chr6:122258971..122258984,+ | |||
|description=CAGE_peak_2_at_M6pr_5end | |||
|id=chr6:122258971..122258984,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!7.89e-15!47;UBERON:0005172!7.07e-13!49;UBERON:0005173!7.07e-13!49;UBERON:0002417!7.07e-13!49;UBERON:0000916!7.07e-13!49;UBERON:0009569!4.52e-12!66;UBERON:0002365!3.15e-11!25;UBERON:0002330!3.15e-11!25;UBERON:0002107!5.48e-11!22;UBERON:0007499!5.48e-11!22;UBERON:0006925!5.48e-11!22;UBERON:0009497!5.48e-11!22;UBERON:0000015!5.48e-11!22;UBERON:0002423!5.48e-11!22;UBERON:0006235!5.48e-11!22;UBERON:0008835!5.48e-11!22;UBERON:0003894!5.48e-11!22;UBERON:0004161!5.48e-11!22;UBERON:0008836!5.48e-11!22;UBERON:0009854!7.48e-11!23;UBERON:0009856!7.48e-11!23;UBERON:0002100!2.05e-09!98;UBERON:0003104!7.38e-08!131;UBERON:0009142!7.38e-08!131;UBERON:0005177!8.49e-08!85;UBERON:0002405!2.74e-07!70;UBERON:0000490!6.57e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,5.17e-16,45;UBERON:0005172,1.13e-12,49;UBERON:0005173,1.13e-12,49;UBERON:0002417,1.13e-12,49;UBERON:0000916,1.13e-12,49;UBERON:0003104,3.22e-12,61;UBERON:0009142,3.22e-12,61;UBERON:0009569,8.55e-12,66;UBERON:0002365,1.80e-11,25;UBERON:0002330,1.80e-11,25;UBERON:0002107,3.17e-11,22;UBERON:0007499,3.17e-11,22;UBERON:0006925,3.17e-11,22;UBERON:0009497,3.17e-11,22;UBERON:0000015,3.17e-11,22;UBERON:0002423,3.17e-11,22;UBERON:0006235,3.17e-11,22;UBERON:0008835,3.17e-11,22;UBERON:0003894,3.17e-11,22;UBERON:0004161,3.17e-11,22;UBERON:0008836,3.17e-11,22;UBERON:0009854,4.35e-11,23;UBERON:0009856,4.35e-11,23;UBERON:0002100,1.11e-10,90;UBERON:0005177,1.13e-08,79;UBERON:0004119,1.38e-08,118;UBERON:0000925,1.38e-08,118;UBERON:0006595,1.38e-08,118;UBERON:0001007,6.29e-08,116;UBERON:0001555,6.29e-08,116;UBERON:0007026,6.29e-08,116;UBERON:0004921,2.10e-07,114;UBERON:0000490,3.93e-07,66;UBERON:0002530,4.88e-07,65 | |||
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| |||
|short_description=p2@M6pr | |||
}} |
Latest revision as of 14:29, 26 September 2015
Short description: | p2@M6pr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_M6pr_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENSMUST00000123093_5end |
EntrezGene: | M6pr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 5.17e-16 | 45 |
abdomen element | 1.13e-12 | 49 |
abdominal segment element | 1.13e-12 | 49 |
abdominal segment of trunk | 1.13e-12 | 49 |
abdomen | 1.13e-12 | 49 |
mesenchyme | 3.22e-12 | 61 |
entire embryonic mesenchyme | 3.22e-12 | 61 |
subdivision of trunk | 8.55e-12 | 66 |
exocrine gland | 1.80e-11 | 25 |
exocrine system | 1.80e-11 | 25 |
liver | 3.17e-11 | 22 |
epithelial sac | 3.17e-11 | 22 |
digestive gland | 3.17e-11 | 22 |
epithelium of foregut-midgut junction | 3.17e-11 | 22 |
anatomical boundary | 3.17e-11 | 22 |
hepatobiliary system | 3.17e-11 | 22 |
foregut-midgut junction | 3.17e-11 | 22 |
hepatic diverticulum | 3.17e-11 | 22 |
liver primordium | 3.17e-11 | 22 |
septum transversum | 3.17e-11 | 22 |
liver bud | 3.17e-11 | 22 |
digestive tract diverticulum | 4.35e-11 | 23 |
sac | 4.35e-11 | 23 |
trunk | 1.11e-10 | 90 |
trunk region element | 1.13e-08 | 79 |
endoderm-derived structure | 1.38e-08 | 118 |
endoderm | 1.38e-08 | 118 |
presumptive endoderm | 1.38e-08 | 118 |
digestive system | 6.29e-08 | 116 |
digestive tract | 6.29e-08 | 116 |
primitive gut | 6.29e-08 | 116 |
subdivision of digestive tract | 2.10e-07 | 114 |
unilaminar epithelium | 3.93e-07 | 66 |
gland | 4.88e-07 | 65 |