FFCP PHASE1:Mm9::chr17:47825941..47825956,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107971 | |EntrezGene=107971 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=159 | |MCL_coexpression_id=159 | ||
|TSSclassifier=NA | |||
|UniProt=D3Z2C8 | |UniProt=D3Z2C8 | ||
|association_with_transcript=-22bp_to_ENSMUST00000128734,ENSMUST00000156118_5end | |association_with_transcript=-22bp_to_ENSMUST00000128734,ENSMUST00000156118_5end | ||
|cluster_id=chr17:47825941..47825956,+ | |||
|description=CAGE_peak_5_at_Frs3_5end | |description=CAGE_peak_5_at_Frs3_5end | ||
|id=chr17:47825941..47825956,+ | |id=chr17:47825941..47825956,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.60e-13!23;CL:0000337!1.60e-13!23;CL:0000540!9.41e-13!33;CL:0000047!9.41e-13!33;CL:0000031!9.41e-13!33;CL:0000404!9.41e-13!33;CL:0000221!1.82e-11!44;CL:0000133!1.82e-11!44;CL:0002319!3.99e-11!43;CL:0000393!6.46e-11!39;CL:0000211!6.46e-11!39;CL:0000055!2.39e-09!50 | |ontology_enrichment_celltype=CL:0000117!1.60e-13!23;CL:0000337!1.60e-13!23;CL:0000540!9.41e-13!33;CL:0000047!9.41e-13!33;CL:0000031!9.41e-13!33;CL:0000404!9.41e-13!33;CL:0000221!1.82e-11!44;CL:0000133!1.82e-11!44;CL:0002319!3.99e-11!43;CL:0000393!6.46e-11!39;CL:0000211!6.46e-11!39;CL:0000055!2.39e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.03e-25,23;CL:0000337,3.03e-25,23;CL:0000540,1.93e-16,33;CL:0000047,1.93e-16,33;CL:0000031,1.93e-16,33;CL:0000404,1.93e-16,33;CL:0000393,2.47e-13,39;CL:0000211,2.47e-13,39;CL:0002319,9.52e-12,43;CL:0000221,2.14e-11,44;CL:0000133,2.14e-11,44;CL:0002610,1.47e-08,3;CL:0000120,3.47e-08,3;CL:0002614,4.85e-08,3;CL:0002613,1.80e-07,3;CL:0002611,8.97e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.78e-25!73;UBERON:0005743!8.78e-25!73;UBERON:0000073!2.55e-24!75;UBERON:0001016!2.55e-24!75;UBERON:0000033!7.92e-22!63;UBERON:0004121!1.98e-21!102;UBERON:0000924!1.98e-21!102;UBERON:0006601!1.98e-21!102;UBERON:0001049!3.08e-21!52;UBERON:0005068!3.08e-21!52;UBERON:0006241!3.08e-21!52;UBERON:0007135!3.08e-21!52;UBERON:0002346!2.07e-20!71;UBERON:0003075!2.07e-20!71;UBERON:0007284!2.07e-20!71;UBERON:0000955!1.45e-19!50;UBERON:0006238!1.45e-19!50;UBERON:0002616!4.73e-19!49;UBERON:0002020!1.11e-15!34;UBERON:0003056!1.84e-15!49;UBERON:0003080!1.29e-13!40;UBERON:0007811!6.26e-13!86;UBERON:0002780!6.56e-13!39;UBERON:0001890!6.56e-13!39;UBERON:0006240!6.56e-13!39;UBERON:0002791!3.55e-12!29;UBERON:0003528!3.55e-12!29;UBERON:0001893!3.55e-12!29;UBERON:0000153!1.53e-11!94;UBERON:0003076!9.33e-09!12;UBERON:0003057!9.33e-09!12;UBERON:0000956!1.33e-07!21;UBERON:0001869!1.33e-07!21;UBERON:0000203!1.33e-07!21;UBERON:0002619!9.50e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!8.78e-25!73;UBERON:0005743!8.78e-25!73;UBERON:0000073!2.55e-24!75;UBERON:0001016!2.55e-24!75;UBERON:0000033!7.92e-22!63;UBERON:0004121!1.98e-21!102;UBERON:0000924!1.98e-21!102;UBERON:0006601!1.98e-21!102;UBERON:0001049!3.08e-21!52;UBERON:0005068!3.08e-21!52;UBERON:0006241!3.08e-21!52;UBERON:0007135!3.08e-21!52;UBERON:0002346!2.07e-20!71;UBERON:0003075!2.07e-20!71;UBERON:0007284!2.07e-20!71;UBERON:0000955!1.45e-19!50;UBERON:0006238!1.45e-19!50;UBERON:0002616!4.73e-19!49;UBERON:0002020!1.11e-15!34;UBERON:0003056!1.84e-15!49;UBERON:0003080!1.29e-13!40;UBERON:0007811!6.26e-13!86;UBERON:0002780!6.56e-13!39;UBERON:0001890!6.56e-13!39;UBERON:0006240!6.56e-13!39;UBERON:0002791!3.55e-12!29;UBERON:0003528!3.55e-12!29;UBERON:0001893!3.55e-12!29;UBERON:0000153!1.53e-11!94;UBERON:0003076!9.33e-09!12;UBERON:0003057!9.33e-09!12;UBERON:0000956!1.33e-07!21;UBERON:0001869!1.33e-07!21;UBERON:0000203!1.33e-07!21;UBERON:0002619!9.50e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.05e-31,54;UBERON:0001017,1.89e-29,73;UBERON:0001016,1.74e-28,75;UBERON:0001049,2.49e-27,52;UBERON:0005068,2.49e-27,52;UBERON:0006241,2.49e-27,52;UBERON:0007135,2.49e-27,52;UBERON:0002346,6.83e-23,64;UBERON:0003075,6.83e-23,64;UBERON:0007284,6.83e-23,64;UBERON:0004121,1.29e-22,95;UBERON:0000924,1.29e-22,95;UBERON:0006601,1.29e-22,95;UBERON:0002020,9.13e-20,34;UBERON:0010371,2.56e-19,73;UBERON:0002616,6.42e-19,46;UBERON:0000955,2.06e-18,47;UBERON:0006238,2.06e-18,47;UBERON:0003076,1.07e-16,12;UBERON:0003057,1.07e-16,12;UBERON:0010314,4.55e-14,92;UBERON:0003080,7.60e-14,40;UBERON:0003528,3.38e-13,29;UBERON:0002791,3.38e-13,29;UBERON:0001893,3.38e-13,29;UBERON:0002780,2.45e-12,39;UBERON:0001890,2.45e-12,39;UBERON:0006240,2.45e-12,39;UBERON:0003056,5.41e-12,49;UBERON:0002240,1.47e-11,6;UBERON:0005174,1.47e-11,6;UBERON:0001137,1.47e-11,6;UBERON:0002950,1.56e-10,4;UBERON:0001891,1.56e-10,4;UBERON:0009616,1.56e-10,4;UBERON:0010286,1.56e-10,4;UBERON:0002420,2.91e-10,8;UBERON:0007245,2.91e-10,8;UBERON:0010009,2.91e-10,8;UBERON:0010011,2.91e-10,8;UBERON:0000454,2.91e-10,8;UBERON:0001948,2.21e-09,5;UBERON:0002315,2.21e-09,5;UBERON:0000025,3.00e-09,114;UBERON:0004684,1.47e-08,3;UBERON:0002275,1.47e-08,3;UBERON:0004111,2.92e-08,122;UBERON:0002038,4.85e-08,3;UBERON:0009663,4.85e-08,3;UBERON:0009661,4.85e-08,3;UBERON:0000125,4.85e-08,3;UBERON:0002308,4.85e-08,3;UBERON:0004733,5.56e-07,6;UBERON:0004732,5.56e-07,6;UBERON:0002028,5.56e-07,6;UBERON:0007277,5.56e-07,6;UBERON:0011216,8.55e-07,194;UBERON:0002256,8.97e-07,2 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.550640256485045,0.782391344348039,0.218025156380447,0.439372365468944,0,0.139986421625363,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,3.1691570175309,1.0165335962074,0.889294796111139,0,0,0,0.299600110518405,0,0.518448061542388,0.135005938331691,0.210324961351382,3.99911378165325,5.30084498283872,0.489963196859816,0.191690942036473,0.919218786610021,4.40463523997555,1.40456071893706,2.76491759861238,1.18697658957174,2.01272815925301,1.04182674111352,3.35019598801657,1.68828783009504,1.06958773443767,3.24091444021034,3.84403538157578,0.745597783301202,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,1.17112318804619,2.51336048176146,0,0,0,0,3.74476598512057,0.915001205637253,0.628271760564322,1.73824320192276,0.767146371990992,2.90903262383384,1.62241263067758,0.203678727700633,0,0,0.420883711772948,0.260240885925407,0.459804208866946,0.360124259610698,1.05493372485001,0.340182495756639,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0,0,1.05144974282064,1.44066457330998,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0.140271639780637,0.189709611372772,0,0.156998727841375,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0,2.24770825982909,2.93029216480508,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0.809621403349789,0.292255857911312,0.395287777946524,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.493647061806363,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,2.03967832211561,0,0.619160603889667,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0,0.469428954583016,0.39061315453185,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,0.226730383615211,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,2.25900737046827,0.460325236507177,0.572895513439397,1.20297227640581,0.685082519770642,0,1.35004500046361,1.35096360967266,0.906284817968409,2.07104124700728,0.103787347584177,0.399024873401031,0.341467211508268,1.21553358534147,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0.962757628775446,0,0,0.188626341386076,0.561849044819294,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.581385666529314,0.376437521661322,0.169229215783353,0,0,0.407412341537585,1.12228454331548,0.355905054372522,0.492522411877817,0,0.464810523557898,0.964533054905707,0.999242311751784,0.233931608445408,0.429742108096597,0.382576664137687,0,0.231867835620421 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.550640256485045,0.782391344348039,0.218025156380447,0.439372365468944,0,0.139986421625363,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,3.1691570175309,1.0165335962074,0.889294796111139,0,0,0,0.299600110518405,0,0.518448061542388,0.135005938331691,0.210324961351382,3.99911378165325,5.30084498283872,0.489963196859816,0.191690942036473,0.919218786610021,4.40463523997555,1.40456071893706,2.76491759861238,1.18697658957174,2.01272815925301,1.04182674111352,3.35019598801657,1.68828783009504,1.06958773443767,3.24091444021034,3.84403538157578,0.745597783301202,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,1.17112318804619,2.51336048176146,0,0,0,0,3.74476598512057,0.915001205637253,0.628271760564322,1.73824320192276,0.767146371990992,2.90903262383384,1.62241263067758,0.203678727700633,0,0,0.420883711772948,0.260240885925407,0.459804208866946,0.360124259610698,1.05493372485001,0.340182495756639,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0,0,1.05144974282064,1.44066457330998,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0.140271639780637,0.189709611372772,0,0.156998727841375,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0,2.24770825982909,2.93029216480508,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0.809621403349789,0.292255857911312,0.395287777946524,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.493647061806363,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,2.03967832211561,0,0.619160603889667,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0,0.469428954583016,0.39061315453185,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,0.226730383615211,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,2.25900737046827,0.460325236507177,0.572895513439397,1.20297227640581,0.685082519770642,0,1.35004500046361,1.35096360967266,0.906284817968409,2.07104124700728,0.103787347584177,0.399024873401031,0.341467211508268,1.21553358534147,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0.962757628775446,0,0,0.188626341386076,0.561849044819294,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.581385666529314,0.376437521661322,0.169229215783353,0,0,0.407412341537585,1.12228454331548,0.355905054372522,0.492522411877817,0,0.464810523557898,0.964533054905707,0.999242311751784,0.233931608445408,0.429742108096597,0.382576664137687,0,0.231867835620421 | ||
|short_description=p5@Frs3 | |short_description=p5@Frs3 | ||
}} | }} |
Latest revision as of 14:35, 26 September 2015
Short description: | p5@Frs3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Frs3_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | -22bp_to_ENSMUST00000128734, ENSMUST00000156118_5end |
EntrezGene: | Frs3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.03e-25 | 23 |
neuroblast (sensu Vertebrata) | 3.03e-25 | 23 |
neuron | 1.93e-16 | 33 |
neuronal stem cell | 1.93e-16 | 33 |
neuroblast | 1.93e-16 | 33 |
electrically signaling cell | 1.93e-16 | 33 |
electrically responsive cell | 2.47e-13 | 39 |
electrically active cell | 2.47e-13 | 39 |
neural cell | 9.52e-12 | 43 |
ectodermal cell | 2.14e-11 | 44 |
neurectodermal cell | 2.14e-11 | 44 |
raphe nuclei neuron | 1.47e-08 | 3 |
granule cell | 3.47e-08 | 3 |
neuron of the substantia nigra | 4.85e-08 | 3 |
striatum neuron | 1.80e-07 | 3 |
neuron of the dorsal spinal cord | 8.97e-07 | 2 |