FFCP PHASE1:Mm9::chr2:35192489..35192503,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13830 | |EntrezGene=13830 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=P54116 | |UniProt=P54116 | ||
|association_with_transcript=0bp_to_ENSMUST00000028241_5end | |association_with_transcript=0bp_to_ENSMUST00000028241_5end | ||
|cluster_id=chr2:35192489..35192503,- | |||
|description=CAGE_peak_1_at_Stom_5end | |description=CAGE_peak_1_at_Stom_5end | ||
|id=chr2:35192489..35192503,- | |id=chr2:35192489..35192503,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.41e-09!47;UBERON:0009569!4.91e-09!66;UBERON:0009854!1.15e-08!23;UBERON:0009856!1.15e-08!23;UBERON:0002107!1.39e-08!22;UBERON:0007499!1.39e-08!22;UBERON:0006925!1.39e-08!22;UBERON:0009497!1.39e-08!22;UBERON:0000015!1.39e-08!22;UBERON:0002423!1.39e-08!22;UBERON:0006235!1.39e-08!22;UBERON:0008835!1.39e-08!22;UBERON:0003894!1.39e-08!22;UBERON:0004161!1.39e-08!22;UBERON:0008836!1.39e-08!22;UBERON:0000466!1.62e-08!79;UBERON:0000926!9.97e-08!193;UBERON:0004120!9.97e-08!193;UBERON:0006603!9.97e-08!193;UBERON:0002365!2.83e-07!25;UBERON:0002330!2.83e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.41e-09,47;UBERON:0009569,4.91e-09,66;UBERON:0009854,1.15e-08,23;UBERON:0009856,1.15e-08,23;UBERON:0002107,1.39e-08,22;UBERON:0007499,1.39e-08,22;UBERON:0006925,1.39e-08,22;UBERON:0009497,1.39e-08,22;UBERON:0000015,1.39e-08,22;UBERON:0002423,1.39e-08,22;UBERON:0006235,1.39e-08,22;UBERON:0008835,1.39e-08,22;UBERON:0003894,1.39e-08,22;UBERON:0004161,1.39e-08,22;UBERON:0008836,1.39e-08,22;UBERON:0002100,1.48e-08,90;UBERON:0005256,1.52e-07,45;UBERON:0005177,2.23e-07,79;UBERON:0002365,2.83e-07,25;UBERON:0002330,2.83e-07,25;UBERON:0004921,4.59e-07,114;UBERON:0004119,4.93e-07,118;UBERON:0000925,4.93e-07,118;UBERON:0006595,4.93e-07,118;UBERON:0001007,7.33e-07,116;UBERON:0001555,7.33e-07,116;UBERON:0007026,7.33e-07,116 | |||
|phase1_expression=5.92550734287738,56.5340160375765,45.9549231783431,48.6967380203996,48.0859900748493,8.05820505177071,14.7175963575181,1.54947988129892,4.78681655315667,3.5109678948299,0,0.239316476986009,0,0.524522414513984,146.235185437076,267.46982822196,385.458594848609,10.567982539501,9.73512478600745,15.2780274647291,24.407424273357,8.43973085207525,7.57479388502913,16.4792195477209,21.1056538581796,52.8293406985819,67.1988714008157,43.7406602352355,197.434332815172,87.9585152862158,95.1223890711257,21.5910428976275,20.9122027778754,31.6963362030877,1.73310971850765,1.99481574430191,1.83752420636132,43.9458212273753,44.5361146378566,70.6757054364628,36.4703522579229,32.7861832780054,38.8408282424923,44.9451640172811,41.3617879375619,37.2599906888214,32.0780451182696,28.5612954858385,60.6333864347142,57.7456800250622,68.4533601748023,41.6882436658418,3.02008690903925,0.725362142011344,0.336093799142464,13.6347501099052,30.3725446335082,28.8776371675368,3.64169629547276,3.70293685490423,4.43681982454325,26.7687180334614,58.6934565433352,54.4439328955246,78.120442642791,67.4956109198795,33.5552123780613,46.1061966385865,2.17748185847803,0.810035629990144,2.10324961351382,9.71213346972932,10.1599528837742,1.95985278743926,2.30029130443767,2.75765635983006,2.20231761998777,3.44755812830007,2.30409799884365,3.56092976871523,2.37867873366265,1.56274011167028,5.30447698102624,7.87867654044352,6.87592114995646,11.490514833473,10.9626194215309,8.01517617048792,5.37655972665607,9.82430281388212,53.045201432407,27.5335640634044,54.39770669662,38.8586297979228,41.5856907166508,18.8171292580881,50.4195468272989,63.7409406441936,41.0461887272533,34.9806178765237,2.11265129665021,19.2489716121477,5.09610479413291,7.11066703153331,59.3185452370727,57.7660493283225,61.6739822918036,40.5352773002663,24.8580368301285,23.6023001113071,15.0932234286538,21.9215144384742,23.753396217374,22.1562281612355,26.3398703983979,31.9193141977376,37.8208300633592,148.06974148599,89.3456657469373,44.1623500356427,116.604321747088,99.8843021458558,37.2783522436244,16.6885054296582,10.6817820474862,82.7680858875836,47.0873439308267,40.7933857075517,86.6618948638301,8.53806644607489,6.40500843946077,5.52879149296603,7.47444576826789,7.92717917724025,6.02585329222724,4.2182728397617,36.051134803012,85.4675888091339,8.84529654517861,27.1469994093551,5.59517904739626,6.89706313300419,8.46292010085141,10.2479276128286,9.79725587779121,10.1209839025031,9.83868107877153,50.9645640355861,3.88022387279116,5.48407632486676,6.68614271823006,10.5213951565236,10.0097009721215,12.537077994798,17.9030458674911,10.7478504081986,98.3098462238529,96.2481172609035,125.031939734061,23.1980865239762,20.8728193383176,21.4273853138608,21.0702814670837,23.4149435779411,33.0131621578989,32.7872862098075,40.5092836113425,30.0086929883626,35.2158078814848,44.817717693593,69.0706257330691,60.6729947815129,54.6679787074716,73.9477367369648,7.78072809687271,10.2904612379284,115.646574044329,74.0461586657924,22.1819780556643,33.906554091624,30.7993232559803,32.6727309889815,29.131523743678,37.4744483441741,45.0802608467286,43.6452230018629,30.9142306824331,28.2518190298434,30.804325764821,40.44687338944,36.0950543290739,48.1921881275569,12.1387456609972,14.738058126655,16.9061603509621,14.8665469327079,12.9948166402309,15.0792012764185,15.0502958355732,12.251642282307,10.5189147653721,13.4502908674763,40.0211046567651,100.941288958237,113.021422190092,149.083580511158,165.939579295795,173.888732181493,155.576395438447,159.383660147749,82.688965655268,84.8394766751172,81.9478777205921,66.2410886849936,53.6704797757044,41.1703571053792,48.0785068238725,68.9894235549615,63.9246037976452,11.1799932944586,17.9261474086228,15.2770577197669,19.0099101113687,49.4143459453356,68.556568575172,58.5400943573396,59.2708141839278,68.2111244118227,67.449367142117,56.6967068916453,49.9059597592438,76.9532991653642,339.280388863363,221.913518998034,16.2282210096282,27.3177378841685,7.86697890940181,7.14991288212439,12.622990794004,40.1428774254953,19.2460013843917,35.5299257309941,36.406554216843,8.84184552424442,7.5751549188014,8.77537245445381,19.4309136803949,29.5178416490425,24.5078422326845,21.5285282002611,34.0656204499845,43.8041385021448,47.7258790905978,51.9655887363487,11.9470624505967,12.1390318077491,13.6045600634138,14.7111962209601,25.1006608948657,28.2840336108413,30.4945385938501,22.5390912276053,20.3203505679291,19.5942789920206,14.7586052004998,15.470331487228,6.80879211507576,5.58189391497062,9.83125996748934,8.14480733120051,11.1724347194632,18.7287258482174,22.7077648430927,27.0973804711993,31.9153522966646,33.4694671964836,9.04166432025344,19.6214641000361,32.7772786192688,24.5473604457594,26.6200327126994,20.3534715683876,21.2781010739791,9.08583979851498,192.058870016786,61.5032866530403,105.746075128105,328.89132593019,235.797542818768,226.719169647664,9.34881364966204,13.7152423277185,13.4053974590291,27.6854479224383,13.1279437336171,36.3941846157059,32.2935969057186,37.4268049865899,35.3747353268808,53.2714168220042,58.9319139321645,21.9874991266585,19.4422459937689,10.5627683224777,22.5477175473676,10.0176085849466,11.7475528224539,15.5560950675238,17.307416346016,14.6991829176977,15.9605844558225,20.5722928053441,18.6649633077765,33.5801927948148,31.9713306946231,9.79634473947353,20.2725215290164,11.5036272024607,9.09445760844565,10.025494957379,15.4971456729387,9.2550496130376,9.45212973917294,14.6401352424814,12.421709484765,9.27600903258933,6.91950953252242,6.5424052315424,7.36324483743884,35.1432094603578,3.55177525398503,3.94740969081693,7.21903850365537,64.5253244067516,73.3838479014122,53.4802742860414,126.048606898491,9.02829787263654,2.82375921308533,3.68260189205742,2.29158205375759,2.749650917499,4.11049511862385,6.0431511791176,3.37511250115903,3.15224842256954,1.35942722695261,0.51776031175182,1.97195960409936,18.3551441764474,23.0490367768081,38.4108612967905,12.9960160829349,8.45680138870065,30.2255549810197,24.5181718114284,28.8827288632634,30.3236654116557,30.1640366869385,30.1802146217722,30.4334899277118,30.7320731543373,30.5556694843863,32.387971007249,27.8122382267653,29.3222015104832,18.5438655361488,27.8205959054011,26.7438016860624,29.2835080162907,33.6195027825723,26.4530478270838,31.9971893412124,26.9920599174448,33.6587470085902,31.3052956611033,23.6299158091799,28.6182558545447,31.319644784782,25.8081743823976,30.283097194557,29.2830629841476,31.443777589926,21.4837097026634,41.1719630863919,47.7013739987222,35.1970531006672,65.7362428976156,68.1691436724039 | |phase1_expression=5.92550734287738,56.5340160375765,45.9549231783431,48.6967380203996,48.0859900748493,8.05820505177071,14.7175963575181,1.54947988129892,4.78681655315667,3.5109678948299,0,0.239316476986009,0,0.524522414513984,146.235185437076,267.46982822196,385.458594848609,10.567982539501,9.73512478600745,15.2780274647291,24.407424273357,8.43973085207525,7.57479388502913,16.4792195477209,21.1056538581796,52.8293406985819,67.1988714008157,43.7406602352355,197.434332815172,87.9585152862158,95.1223890711257,21.5910428976275,20.9122027778754,31.6963362030877,1.73310971850765,1.99481574430191,1.83752420636132,43.9458212273753,44.5361146378566,70.6757054364628,36.4703522579229,32.7861832780054,38.8408282424923,44.9451640172811,41.3617879375619,37.2599906888214,32.0780451182696,28.5612954858385,60.6333864347142,57.7456800250622,68.4533601748023,41.6882436658418,3.02008690903925,0.725362142011344,0.336093799142464,13.6347501099052,30.3725446335082,28.8776371675368,3.64169629547276,3.70293685490423,4.43681982454325,26.7687180334614,58.6934565433352,54.4439328955246,78.120442642791,67.4956109198795,33.5552123780613,46.1061966385865,2.17748185847803,0.810035629990144,2.10324961351382,9.71213346972932,10.1599528837742,1.95985278743926,2.30029130443767,2.75765635983006,2.20231761998777,3.44755812830007,2.30409799884365,3.56092976871523,2.37867873366265,1.56274011167028,5.30447698102624,7.87867654044352,6.87592114995646,11.490514833473,10.9626194215309,8.01517617048792,5.37655972665607,9.82430281388212,53.045201432407,27.5335640634044,54.39770669662,38.8586297979228,41.5856907166508,18.8171292580881,50.4195468272989,63.7409406441936,41.0461887272533,34.9806178765237,2.11265129665021,19.2489716121477,5.09610479413291,7.11066703153331,59.3185452370727,57.7660493283225,61.6739822918036,40.5352773002663,24.8580368301285,23.6023001113071,15.0932234286538,21.9215144384742,23.753396217374,22.1562281612355,26.3398703983979,31.9193141977376,37.8208300633592,148.06974148599,89.3456657469373,44.1623500356427,116.604321747088,99.8843021458558,37.2783522436244,16.6885054296582,10.6817820474862,82.7680858875836,47.0873439308267,40.7933857075517,86.6618948638301,8.53806644607489,6.40500843946077,5.52879149296603,7.47444576826789,7.92717917724025,6.02585329222724,4.2182728397617,36.051134803012,85.4675888091339,8.84529654517861,27.1469994093551,5.59517904739626,6.89706313300419,8.46292010085141,10.2479276128286,9.79725587779121,10.1209839025031,9.83868107877153,50.9645640355861,3.88022387279116,5.48407632486676,6.68614271823006,10.5213951565236,10.0097009721215,12.537077994798,17.9030458674911,10.7478504081986,98.3098462238529,96.2481172609035,125.031939734061,23.1980865239762,20.8728193383176,21.4273853138608,21.0702814670837,23.4149435779411,33.0131621578989,32.7872862098075,40.5092836113425,30.0086929883626,35.2158078814848,44.817717693593,69.0706257330691,60.6729947815129,54.6679787074716,73.9477367369648,7.78072809687271,10.2904612379284,115.646574044329,74.0461586657924,22.1819780556643,33.906554091624,30.7993232559803,32.6727309889815,29.131523743678,37.4744483441741,45.0802608467286,43.6452230018629,30.9142306824331,28.2518190298434,30.804325764821,40.44687338944,36.0950543290739,48.1921881275569,12.1387456609972,14.738058126655,16.9061603509621,14.8665469327079,12.9948166402309,15.0792012764185,15.0502958355732,12.251642282307,10.5189147653721,13.4502908674763,40.0211046567651,100.941288958237,113.021422190092,149.083580511158,165.939579295795,173.888732181493,155.576395438447,159.383660147749,82.688965655268,84.8394766751172,81.9478777205921,66.2410886849936,53.6704797757044,41.1703571053792,48.0785068238725,68.9894235549615,63.9246037976452,11.1799932944586,17.9261474086228,15.2770577197669,19.0099101113687,49.4143459453356,68.556568575172,58.5400943573396,59.2708141839278,68.2111244118227,67.449367142117,56.6967068916453,49.9059597592438,76.9532991653642,339.280388863363,221.913518998034,16.2282210096282,27.3177378841685,7.86697890940181,7.14991288212439,12.622990794004,40.1428774254953,19.2460013843917,35.5299257309941,36.406554216843,8.84184552424442,7.5751549188014,8.77537245445381,19.4309136803949,29.5178416490425,24.5078422326845,21.5285282002611,34.0656204499845,43.8041385021448,47.7258790905978,51.9655887363487,11.9470624505967,12.1390318077491,13.6045600634138,14.7111962209601,25.1006608948657,28.2840336108413,30.4945385938501,22.5390912276053,20.3203505679291,19.5942789920206,14.7586052004998,15.470331487228,6.80879211507576,5.58189391497062,9.83125996748934,8.14480733120051,11.1724347194632,18.7287258482174,22.7077648430927,27.0973804711993,31.9153522966646,33.4694671964836,9.04166432025344,19.6214641000361,32.7772786192688,24.5473604457594,26.6200327126994,20.3534715683876,21.2781010739791,9.08583979851498,192.058870016786,61.5032866530403,105.746075128105,328.89132593019,235.797542818768,226.719169647664,9.34881364966204,13.7152423277185,13.4053974590291,27.6854479224383,13.1279437336171,36.3941846157059,32.2935969057186,37.4268049865899,35.3747353268808,53.2714168220042,58.9319139321645,21.9874991266585,19.4422459937689,10.5627683224777,22.5477175473676,10.0176085849466,11.7475528224539,15.5560950675238,17.307416346016,14.6991829176977,15.9605844558225,20.5722928053441,18.6649633077765,33.5801927948148,31.9713306946231,9.79634473947353,20.2725215290164,11.5036272024607,9.09445760844565,10.025494957379,15.4971456729387,9.2550496130376,9.45212973917294,14.6401352424814,12.421709484765,9.27600903258933,6.91950953252242,6.5424052315424,7.36324483743884,35.1432094603578,3.55177525398503,3.94740969081693,7.21903850365537,64.5253244067516,73.3838479014122,53.4802742860414,126.048606898491,9.02829787263654,2.82375921308533,3.68260189205742,2.29158205375759,2.749650917499,4.11049511862385,6.0431511791176,3.37511250115903,3.15224842256954,1.35942722695261,0.51776031175182,1.97195960409936,18.3551441764474,23.0490367768081,38.4108612967905,12.9960160829349,8.45680138870065,30.2255549810197,24.5181718114284,28.8827288632634,30.3236654116557,30.1640366869385,30.1802146217722,30.4334899277118,30.7320731543373,30.5556694843863,32.387971007249,27.8122382267653,29.3222015104832,18.5438655361488,27.8205959054011,26.7438016860624,29.2835080162907,33.6195027825723,26.4530478270838,31.9971893412124,26.9920599174448,33.6587470085902,31.3052956611033,23.6299158091799,28.6182558545447,31.319644784782,25.8081743823976,30.283097194557,29.2830629841476,31.443777589926,21.4837097026634,41.1719630863919,47.7013739987222,35.1970531006672,65.7362428976156,68.1691436724039 | ||
|short_description=p1@Stom | |short_description=p1@Stom | ||
}} | }} |
Latest revision as of 15:49, 26 September 2015
Short description: | p1@Stom |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stom_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000028241_5end |
EntrezGene: | Stom |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.41e-09 | 47 |
subdivision of trunk | 4.91e-09 | 66 |
digestive tract diverticulum | 1.15e-08 | 23 |
sac | 1.15e-08 | 23 |
liver | 1.39e-08 | 22 |
epithelial sac | 1.39e-08 | 22 |
digestive gland | 1.39e-08 | 22 |
epithelium of foregut-midgut junction | 1.39e-08 | 22 |
anatomical boundary | 1.39e-08 | 22 |
hepatobiliary system | 1.39e-08 | 22 |
foregut-midgut junction | 1.39e-08 | 22 |
hepatic diverticulum | 1.39e-08 | 22 |
liver primordium | 1.39e-08 | 22 |
septum transversum | 1.39e-08 | 22 |
liver bud | 1.39e-08 | 22 |
trunk | 1.48e-08 | 90 |
trunk mesenchyme | 1.52e-07 | 45 |
trunk region element | 2.23e-07 | 79 |
exocrine gland | 2.83e-07 | 25 |
exocrine system | 2.83e-07 | 25 |
subdivision of digestive tract | 4.59e-07 | 114 |
endoderm-derived structure | 4.93e-07 | 118 |
endoderm | 4.93e-07 | 118 |
presumptive endoderm | 4.93e-07 | 118 |
digestive system | 7.33e-07 | 116 |
digestive tract | 7.33e-07 | 116 |
primitive gut | 7.33e-07 | 116 |