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FFCP PHASE1:Mm9::chr12:56593574..56593592,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:56593574..56593592,-
|DHSsupport=NA
|short_description=p1@Nfkbia
|DPIdataset=NA
|description=CAGE_peak_1_at_Nfkbia_5end
|association_with_transcript=41bp_to_ENSMUST00000021413,NM_010907,uc007nor.2_5end
|EntrezGene=18035
|EntrezGene=18035
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q9Z1E3,Q3UB40
|UniProt=Q9Z1E3,Q3UB40
|association_with_transcript=41bp_to_ENSMUST00000021413,NM_010907,uc007nor.2_5end
|cluster_id=chr12:56593574..56593592,-
|description=CAGE_peak_1_at_Nfkbia_5end
|id=chr12:56593574..56593592,-
|ontology_enrichment_celltype=CL:0000063!1.42e-18!66;CL:0000219!7.43e-13!54;CL:0002320!9.50e-12!46;CL:0000134!9.50e-12!46;CL:0000144!1.42e-09!121;CL:0000012!1.42e-09!121;CL:0000066!6.91e-09!25;CL:0002371!2.60e-08!118;CL:0000988!2.65e-08!32;CL:0002032!2.65e-08!32;CL:0000037!2.65e-08!32;CL:0000566!2.65e-08!32;CL:0000837!2.65e-08!32;CL:0000838!1.82e-07!12;CL:0000548!2.74e-07!115;CL:0000004!2.74e-07!115;CL:0000255!2.74e-07!115;CL:0000223!4.07e-07!20;CL:0000738!4.14e-07!17;CL:0002087!4.14e-07!17;CL:0000084!5.34e-07!11;CL:0000827!5.34e-07!11;CL:0000791!7.45e-07!9;CL:0000789!7.45e-07!9;CL:0002420!7.45e-07!9;CL:0002419!7.45e-07!9;CL:0000790!7.45e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000219,7.43e-13,54;CL:0002320,9.50e-12,46;CL:0000134,9.50e-12,46;CL:0000066,6.91e-09,25;CL:0000988,2.65e-08,32;CL:0002032,2.65e-08,32;CL:0000037,2.65e-08,32;CL:0000837,2.65e-08,32;CL:0000838,1.82e-07,12;CL:0000223,4.07e-07,20;CL:0000738,4.14e-07,17;CL:0002087,4.14e-07,17;CL:0000084,5.34e-07,11;CL:0000827,5.34e-07,11;CL:0000791,7.45e-07,9;CL:0000789,7.45e-07,9;CL:0002420,7.45e-07,9;CL:0002419,7.45e-07,9;CL:0000790,7.45e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.15e-12!48;UBERON:0002384!9.50e-12!46;UBERON:0002390!2.81e-11!45;UBERON:0003061!2.81e-11!45;UBERON:0000490!9.84e-10!66;UBERON:0002204!1.24e-08!32;UBERON:0002405!2.26e-08!70;UBERON:0000072!3.23e-08!27;UBERON:0000344!6.38e-08!15;UBERON:0006562!1.10e-07!24;UBERON:0001557!1.10e-07!24;UBERON:0001042!1.10e-07!24;UBERON:0008814!1.10e-07!24;UBERON:0009145!1.10e-07!24;UBERON:0003408!1.52e-07!24;UBERON:0002370!1.54e-07!23;UBERON:0000974!1.54e-07!23;UBERON:0004807!1.54e-07!23;UBERON:0005058!1.54e-07!23;UBERON:0003351!1.54e-07!23;UBERON:0009113!1.54e-07!23;UBERON:0003295!1.54e-07!23;UBERON:0009722!1.54e-07!23;UBERON:0005562!1.54e-07!23;UBERON:0007690!1.54e-07!23;UBERON:0001004!1.87e-07!42;UBERON:0000065!2.15e-07!41;UBERON:0003081!3.04e-07!88;UBERON:0001242!6.97e-07!13;UBERON:0000060!6.97e-07!13;UBERON:0001262!6.97e-07!13;UBERON:0004786!6.97e-07!13;UBERON:0005911!9.55e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.15e-12,48;UBERON:0002405,1.15e-12,48;UBERON:0002384,9.50e-12,46;UBERON:0002390,2.81e-11,45;UBERON:0003061,2.81e-11,45;UBERON:0000490,9.84e-10,66;UBERON:0002204,1.24e-08,32;UBERON:0000072,3.23e-08,27;UBERON:0000344,6.38e-08,15;UBERON:0006562,1.10e-07,24;UBERON:0001557,1.10e-07,24;UBERON:0001042,1.10e-07,24;UBERON:0008814,1.10e-07,24;UBERON:0009145,1.10e-07,24;UBERON:0003408,1.52e-07,24;UBERON:0002370,1.54e-07,23;UBERON:0000974,1.54e-07,23;UBERON:0004807,1.54e-07,23;UBERON:0005058,1.54e-07,23;UBERON:0003351,1.54e-07,23;UBERON:0009113,1.54e-07,23;UBERON:0003295,1.54e-07,23;UBERON:0009722,1.54e-07,23;UBERON:0005562,1.54e-07,23;UBERON:0007690,1.54e-07,23;UBERON:0001004,1.87e-07,42;UBERON:0000065,2.15e-07,41;UBERON:0000077,5.48e-07,35;UBERON:0000926,5.79e-07,120;UBERON:0004120,5.79e-07,120;UBERON:0006603,5.79e-07,120;UBERON:0003081,5.82e-07,87;UBERON:0001242,6.97e-07,13;UBERON:0001262,6.97e-07,13;UBERON:0004786,6.97e-07,13;UBERON:0005911,9.55e-07,69
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55603078,23.3817387195876,30.8895274750352,52.6902505956461,65.9454942513456,41.9428117256792,40.1695794825133,71.9828840456081,94.7485454763006,65.8619671872141,24.2387963634202,32.1460573994554,28.9552358299921,24.8897521080381,36.8105496911534,37.8461721099343,39.5493894236191,40.6237680713124,46.2429708917385,25.6079168075566,19.8740704317927,172.226060742357,71.7647262127181,95.6239011204542,89.385526208723,92.3777749644204,120.99694506179,90.2667825894966,104.121116658077,83.2973212072218,86.4185187467698,117.76498423983,134.199501778639,132.868553305295,162.342017130199,86.837736924626,45.9510923484314,28.7981479716417,42.81057717284,49.6497256662729,115.612404877928,203.481454560931,247.8098462154,92.7908392465422,35.0146142422581,37.7466693935885,40.1026859407578,21.997207339992,23.9778881919725,14.3524840504043,20.925697507186,31.5224842256954,35.345107900768,28.4768171463501,16.3984009182999,21.5473431636557,27.4881105264156,26.9848455945806,25.5728058406138,40.4455718590031,46.227319382736,43.8854671918845,57.1236193073431,45.9908925410111,59.0606768744259,48.2883433948355,42.7941689137363,46.9944618651741,36.1269099730807,35.2457331549475,35.2288350872361,33.5662043606847,46.977792691577,39.7437084362873,58.630642157906,39.7545805796916,42.9185141905178,47.5282782387714,47.0546902076653,41.1226994353548,47.0124890283025,28.6745985467249,37.6177395353037,55.5530848941161,41.0477162709643,33.9840464195694,36.0123317989327,34.8607892668423,45.9117734135116,53.9590848345963,54.7399963762256,58.4449267011371,111.521097596136,51.6183920739666,56.112016220142
|phase1_expression=58.1340314990402,837.192002926827,1165.70805131599,323.636706098308,388.194190708419,663.962520411524,659.722097041765,910.577676909996,4178.60927346147,6008.67045521189,474.958643857551,479.031814766995,259.711507305639,402.308691932226,67.9543914103952,60.1351544147783,44.7719602002014,230.91830504223,241.458517579706,249.116725605444,76.0287013950564,83.6029809111454,100.823118607629,378.862057174787,411.78965951557,859.05101831607,1073.88965642457,763.845519871477,116.674379546214,97.7876903468531,370.068222283704,20.3209815507082,21.52726756546,15.8481681015439,130.272080507825,78.9614565452839,116.989041138337,398.860644092273,385.198324850234,234.538637300262,395.291559956842,568.293843485427,206.827410391271,162.910482460397,152.47090455415,72.3174203517025,361.464801088794,100.291571935005,141.258215498265,114.324780655679,111.289205192163,104.939371986429,267.781039268147,685.46722420072,494.730072337707,153.841142749496,173.066197723009,186.673297404434,23.0640765379941,27.5075309221457,20.9164363157039,89.1161119341817,87.1508900188917,222.725180027146,253.149788817145,281.350125518656,89.2808329344846,86.0649003920282,18.5604406032175,25.7861342213529,25.2389953621658,45.4185065202048,44.8363138131775,19.1085646775328,18.6898668485561,17.4651569455904,25.3266526298594,23.2390955315042,25.6522910537927,20.9699197491008,24.5186884854458,20.8365348222704,26.5223849051312,30.3891809417107,27.8092810953794,38.8909732825241,29.1861945638161,28.1463163196204,56.5674664198885,23.3516120729967,828.142844220693,195.316220074775,180.872374766262,121.972921310147,67.5767474145576,120.519232629183,79.6319862147033,52.1516787088857,59.4909950540569,46.9941634098752,75.2103861607474,52.6138557398703,61.153257529595,56.8853362522665,94.6065849219006,86.6490739924837,92.0054489926906,117.038476712036,151.478661933595,88.4715148826356,44.5857289788969,98.6468149731337,66.878494204257,82.5960070228372,75.2567725668511,60.4456304295739,115.687244899687,73.8902713860749,80.4995602274386,36.2357743882197,43.5057791366975,46.0631490478461,98.7876334456047,19.3235326027621,23.8769245767339,111.123819015737,776.042561424846,635.896894853012,557.838296850754,26.5129431746536,38.4300506367646,16.2094114225595,18.251553620189,17.3886510984625,27.8435979709811,26.76980840618,51.4288787444097,63.1987410699273,40.9410868662553,41.8779293214083,20.8192708740326,33.3358051428536,21.7875177064473,24.7155901250573,31.7050086045188,24.5978342946912,21.7388000978571,35.4423617912451,22.6346392579484,34.6064126707109,39.0611495643966,40.7704062315289,50.3265521098332,72.7847028031328,57.2074339214083,25.4763861527671,456.438571753603,458.851318385537,443.295059057124,17.8128164380532,21.8109235782419,18.7264543919455,26.0419209143731,28.1372851398787,29.1564843357145,27.4390054805481,30.314894358157,30.9428157272999,15.1395061920402,31.6843205672654,44.6689140597665,52.6319954731196,60.815381935621,50.5958198726602,22.9216043934899,19.8605901892019,227.658541475837,45.4854974661296,17.276348293354,22.2947204986021,23.1961430379768,27.4289593487746,30.6881700505921,31.3872283085723,71.1793592316767,30.79870453339,29.9088898472321,37.2048602716952,27.1000081095577,85.387843822151,57.276583216794,69.1020218192654,27.3121777372438,21.9357144210679,24.7957018480777,26.2710212920455,39.7602598693633,29.4570443539338,25.6740340724485,31.5885716676349,32.1847392074818,37.6361349961492,76.4847777884844,11.0117769772622,9.23827277032054,8.31989815823959,12.1716072833102,14.7118067448974,29.0273471030819,32.2219673944908,60.9628452674133,25.8087728396797,69.0087391331302,46.1454775108944,28.395428253425,47.484829054057,31.0357525392908,58.3756660849674,144.292241520118,23.8759178830811,28.8448008302386,33.2700368119369,45.0605276713924,75.8803346211425,102.358765580986,89.9566116624453,54.0688544284235,53.151525515706,38.2691444777969,114.048867042154,88.9327656609362,116.153194040954,141.743806902916,283.374861269548,120.974011162683,142.383361093242,26.972499117949,26.2554177966535,36.3935578736219,60.5930225290495,32.4973465998744,35.5299257309941,31.6672394667214,35.6063508949303,36.5389825495126,33.6861071638711,41.6955022725141,42.3770993971402,35.5759000151871,29.5615611108062,58.3373750205984,41.4892856544705,50.8207313183157,72.2569138619705,45.1333470355874,21.8502572539483,19.9533547596736,30.1768127609437,46.6576990751621,39.9665692327106,39.0226722684014,33.808636841408,29.5892824059319,38.8725212261054,61.1427929734993,43.3169281642385,59.2364914011591,19.0864759673189,29.7524972700335,27.2208034490122,35.1133662611702,48.3379495701611,60.7185886021826,128.484208526361,46.6996699046784,61.8549646922355,54.4705143195756,93.4905054178192,117.223173781227,36.3083808067498,59.3280549695588,42.6766339337159,50.4261847369642,34.4891061739548,74.1579622662681,39.4198917809755,44.2614920413611,31.2691638627787,44.4256240093332,73.6665717725003,720.87852160394,834.250607301325,623.972881726973,80.1923319132695,21.6690155603078,23.3817387195876,30.8895274750352,52.6902505956461,65.9454942513456,41.9428117256792,40.1695794825133,71.9828840456081,94.7485454763006,65.8619671872141,24.2387963634202,32.1460573994554,28.9552358299921,24.8897521080381,36.8105496911534,37.8461721099343,39.5493894236191,40.6237680713124,46.2429708917385,25.6079168075566,19.8740704317927,172.226060742357,71.7647262127181,95.6239011204542,89.385526208723,92.3777749644204,120.99694506179,90.2667825894966,104.121116658077,83.2973212072218,86.4185187467698,117.76498423983,134.199501778639,132.868553305295,162.342017130199,86.837736924626,45.9510923484314,28.7981479716417,42.81057717284,49.6497256662729,115.612404877928,203.481454560931,247.8098462154,92.7908392465422,35.0146142422581,37.7466693935885,40.1026859407578,21.997207339992,23.9778881919725,14.3524840504043,20.925697507186,31.5224842256954,35.345107900768,28.4768171463501,16.3984009182999,21.5473431636557,27.4881105264156,26.9848455945806,25.5728058406138,40.4455718590031,46.227319382736,43.8854671918845,57.1236193073431,45.9908925410111,59.0606768744259,48.2883433948355,42.7941689137363,46.9944618651741,36.1269099730807,35.2457331549475,35.2288350872361,33.5662043606847,46.977792691577,39.7437084362873,58.630642157906,39.7545805796916,42.9185141905178,47.5282782387714,47.0546902076653,41.1226994353548,47.0124890283025,28.6745985467249,37.6177395353037,55.5530848941161,41.0477162709643,33.9840464195694,36.0123317989327,34.8607892668423,45.9117734135116,53.9590848345963,54.7399963762256,58.4449267011371,111.521097596136,51.6183920739666,56.112016220142
|short_description=p1@Nfkbia
}}
}}

Latest revision as of 16:30, 26 September 2015

Short description:p1@Nfkbia
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nfkbia_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 41bp_to_ENSMUST00000021413, NM_010907, uc007nor.2_5end
EntrezGene:Nfkbia
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nfkbia

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G758.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5837.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61165.71
CD326+ enterocyte, pool1.CNhs13542.11848-124I3323.64
CD326+ enterocyte, pool2.CNhs13197.11849-124I4388.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7663.96
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8659.72
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9910.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74178.61
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26008.67
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6474.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1479.03
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4259.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8402.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A167.95
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A360.14
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A544.77
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2230.92
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4241.46
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6249.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A376.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H283.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9100.82
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1378.86
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2411.79
GP2+ M cell, pool1.CNhs13228.11845-124H9859.05
GP2+ M cell, pool2.CNhs13231.11846-124I11073.89
GP2+ M cell, pool3.CNhs13240.11847-124I2763.85
Ileum epithelium, pool1.CNhs13199.10252-104B9116.67
Ileum epithelium, pool2.CNhs13232.10253-104C197.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8370.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G621.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5130.27
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F678.96
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7116.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8398.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1385.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3234.54
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9395.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2568.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4206.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8162.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9152.47
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B372.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7361.46
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2100.29
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8141.26
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3114.32
Mouse Astrocytes, donor2.CNhs12078.11552-120C4111.29
Mouse Astrocytes, donor3.CNhs12107.11633-122C4104.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2267.78
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9685.47
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1494.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1153.84
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1173.07
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5186.67
Mouse Granule cells, donor1.CNhs12131.11713-123C323.06
Mouse Granule cells, donor2.CNhs12357.11731-123E327.51
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C689.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D187.15
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7222.73
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7253.15
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2281.35
Mouse Microglia, donor1.CNhs12629.11718-123C889.28
Mouse Microglia, donor2.CNhs12634.11736-123E886.06
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F525.79
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.24
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F145.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D544.84
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D219.11
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.69
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D325.33
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F323.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.65
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F424.52
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.52
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E530.39
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I627.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D638.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.19
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.15
Mouse Schwann, donor1.CNhs12507.11728-123D956.57
Mouse Schwann, donor2.CNhs12573.11746-123F923.35
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3828.14
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7195.32
Mouse hepatocyte, donor1.CNhs13078.11714-123C4180.87
Mouse hepatocyte, donor3.CNhs12615.11637-122C8121.97
Mouse hepatocyte, donor6.CNhs13090.11822-124F467.58
Mouse hepatocyte, donor8.CNhs13091.11824-124F6120.52
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A779.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I752.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E359.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I846.99
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G675.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H152.61
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I861.15
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G194.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G286.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G392.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6117.04
accessory axillary lymph node, adult.CNhs10475.1063-29H9151.48
adrenal gland, adult.CNhs10508.49-24D788.47
adrenal gland, embryo E14.CNhs11038.406-44C544.59
adrenal gland, embryo E16.CNhs11004.1254-43D698.65
adrenal gland, embryo E17.CNhs11043.1263-45I166.88
adrenal gland, embryo E18.CNhs11026.1262-18F582.60
adrenal gland, neonate N00.CNhs11191.1311-23C175.26
adrenal gland, neonate N25.CNhs11223.1377-27I360.45
amnion, adult pregnant day17.5.CNhs10488.583-22A8115.69
aorta, adult.CNhs10498.46-23H173.89
bone (os femoris), adult.CNhs10483.56-12G280.50
bone (os femoris), neonate N02.CNhs11227.1985-43F536.24
bone (os femoris), neonate N16.CNhs11225.1525-43A643.51
bone (os femoris), neonate N20.CNhs11195.1350-25C346.06
cecum, adult.CNhs10467.37-13H498.79
cerebellum, adult.CNhs10494.15-8B219.32
cerebellum, neonate N30.CNhs11135.1395-42I223.88
colon, adult.CNhs10468.36-18H7111.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7776.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1635.90
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4557.84
corpora quadrigemina, adult.CNhs10501.16-22A426.51
corpus striatum, adult.CNhs10487.19-21D838.43
corpus striatum, neonate N00.CNhs11226.630-43F116.21
cortex, adult.CNhs10473.12-14D518.25
cortex, neonate N30.CNhs11107.1392-42F217.39
diencephalon, adult.CNhs10482.20-12F227.84
diencephalon, neonate N30.CNhs11201.1388-42B226.77
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B151.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A263.20
epididymis, adult.CNhs10490.58-23B240.94
eyeball, adult.CNhs10484.31-12G441.88
eyeball, embryo E12.CNhs11016.345-16C620.82
eyeball, embryo E14.CNhs10521.399-16E233.34
eyeball, embryo E15.CNhs10593.426-16C921.79
eyeball, embryo E17.CNhs11023.1261-18D424.72
eyeball, neonate N00.CNhs11207.633-15C631.71
eyeball, neonate N01.CNhs11140.1532-43E724.60
eyeball, neonate N02.CNhs11205.1551-44G821.74
eyeball, neonate N16.CNhs11188.777-19A235.44
forelimb, embryo E11.CNhs10596.335-25E222.63
forelimb, embryo E12.CNhs10600.359-14H234.61
forelimb, embryo E13.CNhs10589.384-1E239.06
forelimb, embryo E14.CNhs10577.413-26A840.77
forelimb, embryo E15.CNhs11007.437-20E750.33
forelimb, embryo E17.CNhs10598.1517-43C472.78
forelimb, embryo E18.CNhs11008.1520-43B557.21
gonad, embryo E13.CNhs11044.1564-45I625.48
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8456.44
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2458.85
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5443.30
heart, embryo E11.CNhs10586.331-24E917.81
heart, embryo E12.CNhs11015.353-12F521.81
heart, embryo E13.CNhs11013.376-3I918.73
heart, embryo E14.CNhs10597.403-26D426.04
heart, embryo E15.CNhs11017.431-16C828.14
heart, embryo E16.CNhs11021.457-17C629.16
heart, embryo E17.CNhs11025.479-18E527.44
heart, embryo E18.CNhs11030.1283-20G330.31
heart, neonate N00.CNhs11213.639-21E330.94
heart, neonate N03.CNhs11221.1349-25I215.14
heart, neonate N10.CNhs11118.749-24G131.68
heart, neonate N16.CNhs11209.782-15G144.67
heart, neonate N20.CNhs11127.821-26I652.63
heart, neonate N25.CNhs11196.1351-25D360.82
heart, neonate N30.CNhs11202.1390-42D250.60
hippocampus, adult.CNhs10478.13-16E822.92
hippocampus, neonate N00.CNhs11228.627-43G119.86
intestinal mucosa, adult.CNhs10506.860-29I3227.66
intestine, adult.CNhs10496.178-9A345.49
intestine, embryo E12.CNhs11019.1251-16I517.28
intestine, embryo E13.CNhs11010.381-16D522.29
intestine, embryo E15.CNhs10602.976-16D823.20
intestine, embryo E16.CNhs10585.463-22H427.43
intestine, embryo E17.CNhs10582.482-18D330.69
intestine, embryo E18.CNhs10526.1289-20F731.39
intestine, neonate N00.CNhs11126.644-26D171.18
intestine, neonate N01.CNhs11192.1322-23E930.80
intestine, neonate N06.CNhs11102.688-20B829.91
intestine, neonate N07.CNhs11095.720-20F237.20
intestine, neonate N10.CNhs11098.755-23A527.10
intestine, neonate N20.CNhs11187.827-18D185.39
intestine, neonate N25.CNhs11121.1352-25E357.28
intestine, neonate N30.CNhs11131.1384-42G169.10
kidney, embryo E14.CNhs10606.411-4I927.31
kidney, embryo E15.CNhs10997.434-16F821.94
kidney, embryo E16.CNhs10584.464-22A524.80
kidney, embryo E17.CNhs11028.483-18I226.27
kidney, embryo E18.CNhs11001.1288-20C739.76
kidney, neonate N00.CNhs11214.646-21G729.46
kidney, neonate N10.CNhs11206.758-6D525.67
kidney, neonate N20.CNhs11113.832-19I131.59
kidney, neonate N25.CNhs11122.1353-25F332.18
kidney, neonate N30.CNhs11203.1385-42H137.64
liver, adult pregnant day01.CNhs10466.508-5B276.48
liver, embryo E12.CNhs10601.355-15F811.01
liver, embryo E13.CNhs10524.378-3H69.24
liver, embryo E14.CNhs10594.409-16E18.32
liver, embryo E15.CNhs10520.433-16D712.17
liver, embryo E16.CNhs10523.462-17F514.71
liver, embryo E17.CNhs10510.481-18A329.03
liver, embryo E18.CNhs10579.499-43G432.22
liver, neonate N00.CNhs11117.641-24F460.96
liver, neonate N03.CNhs11123.1345-25G225.81
liver, neonate N06.CNhs11101.684-20A869.01
liver, neonate N07.CNhs11103.716-20H246.15
liver, neonate N10.CNhs11115.751-24B928.40
liver, neonate N20.CNhs11220.823-25A347.48
liver, neonate N25.CNhs11198.1368-26H131.04
liver, neonate N30.CNhs11106.1382-42D158.38
lung, adult.CNhs10474.28-22B1144.29
lung, embryo E12.CNhs10522.354-16G223.88
lung, embryo E14.CNhs10604.404-26F828.84
lung, embryo E15.CNhs11020.432-17C533.27
lung, embryo E16.CNhs10998.458-17B645.06
lung, embryo E17.CNhs10605.480-44A675.88
lung, embryo E18.CNhs10583.1287-20I6102.36
lung, neonate N00.CNhs11224.640-42C689.96
lung, neonate N06.CNhs11212.683-20E554.07
lung, neonate N07.CNhs11111.715-19A353.15
lung, neonate N10.CNhs11219.750-23E638.27
lung, neonate N20.CNhs11109.822-18A4114.05
lung, neonate N25.CNhs11119.1359-25C788.93
lung, neonate N30.CNhs11133.1394-42H2116.15
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1141.74
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1283.37
mammary gland, adult lactating day02.CNhs10480.595-22B6120.97
mammary gland, adult pregnant day19.CNhs10476.588-5H2142.38
medulla oblongata, adult.CNhs10477.17-12C226.97
medulla oblongata, neonate N30.CNhs11200.1396-42A326.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C736.39
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C260.59
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E132.50
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E235.53
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E331.67
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D735.61
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D836.54
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D933.69
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D441.70
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D542.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D635.58
olfactory brain, adult.CNhs10489.18-22I929.56
ovary, adult.CNhs10507.91-2I758.34
ovary, embryo E18.CNhs11040.505-44H741.49
ovary, neonate N00.CNhs11217.1299-22I450.82
oviduct, adult pregnant day01.CNhs10500.988-6G672.26
pancreas, adult.CNhs10486.34-16E445.13
pancreas, embryo E14.CNhs11012.405-44F421.85
pancreas, embryo E15.CNhs11042.1556-45F219.95
pancreas, embryo E16.CNhs11003.460-26E530.18
pancreas, embryo E17.CNhs10599.1558-45G346.66
pancreas, embryo E18.CNhs10580.1535-43I739.97
pancreas, neonate N00.CNhs11105.645-26G939.02
pancreas, neonate N01.CNhs11138.1531-43D733.81
pancreas, neonate N02.CNhs11139.1539-43D829.59
pancreas, neonate N16.CNhs11136.787-43B638.87
pancreas, neonate N25.CNhs11094.1555-45E261.14
pancreas, neonate N30.CNhs11182.1548-44H543.32
pituitary gland, adult.CNhs10493.21-1G859.24
pituitary gland, embryo E12.CNhs11018.346-16E619.09
pituitary gland, embryo E13.CNhs11009.370-44C729.75
pituitary gland, embryo E14.CNhs11037.398-44A527.22
pituitary gland, embryo E15.CNhs10592.427-16B935.11
pituitary gland, embryo E16.CNhs11036.449-43F648.34
pituitary gland, embryo E17.CNhs11039.1265-44F560.72
pituitary gland, neonate N00.CNhs11190.1308-22E9128.48
placenta, adult pregnant day10.CNhs10472.539-13I746.70
placenta, adult pregnant day17.CNhs10464.577-18G361.85
prostate, adult.CNhs10470.859-1F854.47
skin, adult.CNhs10492.30-1C393.49
skin, neonate N00.CNhs11124.650-25G4117.22
skin, neonate N03.CNhs11215.662-22H336.31
skin, neonate N06.CNhs11097.693-20I559.33
skin, neonate N10.CNhs11108.762-6C442.68
small intestine, neonate N16.CNhs11114.790-21I150.43
spinal cord, adult.CNhs10505.24-13C934.49
spleen, adult.CNhs10465.25-2G274.16
spleen, embryo E16.CNhs11035.461-43C139.42
spleen, embryo E18.CNhs11011.1271-21F244.26
spleen, neonate N10.CNhs11116.752-24D131.27
spleen, neonate N20.CNhs11112.824-19H144.43
spleen, neonate N25.CNhs11099.1354-25G373.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6720.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9834.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3623.97
stomach, adult.CNhs10503.33-1H680.19
stomach, embryo E12.CNhs10588.356-43E321.67
stomach, embryo E15.CNhs10603.1252-16G823.38
stomach, embryo E16.CNhs11022.459-17D430.89
stomach, embryo E17.CNhs11006.1035-18D552.69
stomach, embryo E18.CNhs10999.1286-20C665.95
stomach, neonate N03.CNhs11193.1340-24B841.94
stomach, neonate N07.CNhs11210.718-18A940.17
stomach, neonate N25.CNhs11104.1355-25E471.98
stomach, neonate N30.CNhs11134.1386-42I194.75
submandibular gland, adult.CNhs10469.59-29C165.86
testis, adult.CNhs10504.57-7G524.24
testis, embryo E13.CNhs11031.389-23F532.15
testis, embryo E15.CNhs11034.443-27C528.96
testis, embryo E16.CNhs11033.470-26G524.89
testis, embryo E17.CNhs11029.486-18I536.81
testis, embryo E18.CNhs11027.503-18G537.85
testis, neonate N00.CNhs11189.1300-22B739.55
testis, neonate N07.CNhs11222.726-26I440.62
testis, neonate N10.CNhs11204.763-44D946.24
testis, neonate N20.CNhs11110.839-18H325.61
testis, neonate N30.CNhs11130.1391-42E219.87
thymus, adult.CNhs10471.38-12B5172.23
thymus, embryo E14.CNhs11041.402-44I471.76
thymus, embryo E15.CNhs11005.430-45I295.62
thymus, embryo E16.CNhs11002.456-26C589.39
thymus, embryo E17.CNhs10581.478-18C192.38
thymus, embryo E18.CNhs10595.1273-19G4121.00
thymus, neonate N02.CNhs11181.1541-43F890.27
thymus, neonate N03.CNhs11137.2104-43C7104.12
thymus, neonate N06.CNhs11197.681-26C483.30
thymus, neonate N07.CNhs11211.713-19D386.42
thymus, neonate N10.CNhs11194.748-24E4117.76
thymus, neonate N20.CNhs11186.820-7A2134.20
thymus, neonate N25.CNhs11125.1362-25G7132.87
thymus, neonate N30.CNhs11132.1393-42G2162.34
tongue, adult.CNhs10499.32-1B486.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H345.95
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F728.80
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G542.81
urinary bladder, adult.CNhs10481.879-12E449.65
uterus, adult pregnant day19.CNhs10497.590-15F5115.61
uterus, adult.CNhs10509.92-27E5203.48
vagina, adult.CNhs10502.89-27D5247.81
vesicular gland, adult.CNhs10491.51-27F892.79
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A135.01
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A237.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A340.10
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.52
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A835.35
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A928.48
whole body, embryo E11.CNhs11014.324-5I816.40
whole body, embryo E12.CNhs10587.857-27C921.55
whole body, embryo E13.CNhs10512.372-23H227.49
whole body, embryo E14.5.CNhs10578.420-27D226.98
whole body, embryo E14.CNhs10519.395-14B125.57
whole body, embryo E16.CNhs10514.453-14F240.45
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G546.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G543.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G557.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G545.99
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G559.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G548.29
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G542.79
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G546.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G536.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G535.25
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G535.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G533.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G546.98
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G539.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G558.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G539.75
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G542.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G547.53
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G547.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G541.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G547.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G528.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G537.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G555.55
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G541.05
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G533.98
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G536.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G534.86
whole body, embryo E17.5.CNhs10513.490-9F945.91
whole body, embryo E17.CNhs10517.475-3I553.96
whole body, embryo E18.CNhs10516.493-3B354.74
whole body, neonate N00.CNhs10525.657-19C258.44
whole body, neonate N01.CNhs10576.659-23C6111.52
whole body, neonate N06.CNhs10515.692-21D151.62
whole body, neonate N10.CNhs10518.761-6B456.11





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.15e-1248
immune system1.15e-1248
connective tissue9.50e-1246
hematopoietic system2.81e-1145
blood island2.81e-1145
unilaminar epithelium9.84e-1066
musculoskeletal system1.24e-0832
segment of respiratory tract3.23e-0827
mucosa6.38e-0815
pharynx1.10e-0724
upper respiratory tract1.10e-0724
chordate pharynx1.10e-0724
pharyngeal arch system1.10e-0724
pharyngeal region of foregut1.10e-0724
gland of gut1.52e-0724
thymus1.54e-0723
neck1.54e-0723
respiratory system epithelium1.54e-0723
hemolymphoid system gland1.54e-0723
pharyngeal epithelium1.54e-0723
thymic region1.54e-0723
pharyngeal gland1.54e-0723
entire pharyngeal arch endoderm1.54e-0723
thymus primordium1.54e-0723
early pharyngeal endoderm1.54e-0723
respiratory system1.87e-0742
respiratory tract2.15e-0741
mixed endoderm/mesoderm-derived structure5.48e-0735
mesoderm5.79e-07120
mesoderm-derived structure5.79e-07120
presumptive mesoderm5.79e-07120
lateral plate mesoderm5.82e-0787
intestinal mucosa6.97e-0713
wall of intestine6.97e-0713
gastrointestinal system mucosa6.97e-0713
endo-epithelium9.55e-0769
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