FFCP PHASE1:Mm9::chr4:149283679..149283684,-: Difference between revisions
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|id=chr4:149283679..149283684,-
|short_description=p9@Spsb1
|description=CAGE_peak_9_at_Spsb1_5end
|association_with_transcript=155bp_to_uc008vxf.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74646 | |EntrezGene=74646 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=A2A7B4 | |UniProt=A2A7B4 | ||
|association_with_transcript=155bp_to_uc008vxf.1_5end | |||
|cluster_id=chr4:149283679..149283684,- | |||
|description=CAGE_peak_9_at_Spsb1_5end | |||
|id=chr4:149283679..149283684,- | |||
|ontology_enrichment_celltype=CL:0002563!3.09e-37!9;CL:0002251!3.09e-37!9;CL:0000239!3.30e-25!6;CL:0000677!3.30e-25!6;CL:0000212!3.30e-25!6;CL:0000584!3.30e-25!6;CL:0000066!2.39e-22!25;CL:0002076!8.08e-22!15;CL:0000075!1.53e-21!7;CL:0000223!5.04e-16!20;CL:0002250!1.50e-13!3;CL:0000473!7.43e-13!3;CL:0000627!7.43e-13!3;CL:0000682!7.43e-13!3;CL:0000063!3.65e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.09e-35,9;CL:0002251,5.09e-35,9;CL:0002076,3.22e-21,15;CL:0000239,1.37e-19,6;CL:0000677,1.37e-19,6;CL:0000584,1.37e-19,6;CL:0000066,3.44e-18,25;CL:0002250,1.31e-17,3;CL:0000075,6.59e-17,7;CL:0000223,5.06e-16,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!1.92e-44!13;UBERON:0000060!1.92e-44!13;UBERON:0001262!1.92e-44!13;UBERON:0004786!1.92e-44!13;UBERON:0000344!2.94e-38!15;UBERON:0003350!3.09e-37!9;UBERON:0004808!3.09e-37!9;UBERON:0001277!3.09e-37!9;UBERON:0000485!3.11e-30!11;UBERON:0004923!3.66e-23!24;UBERON:0000160!1.78e-16!43;UBERON:0005409!2.44e-11!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.09e-35,9;UBERON:0004808,5.09e-35,9;UBERON:0001277,5.09e-35,9;UBERON:0000485,9.39e-29,11;UBERON:0001242,2.07e-24,13;UBERON:0001262,2.07e-24,13;UBERON:0004786,2.07e-24,13;UBERON:0000344,3.22e-21,15;UBERON:0004923,2.05e-13,24;UBERON:0000160,1.85e-10,31;UBERON:0005409,5.58e-07,47 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,7.56160528267075,2.50447864973174,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,1.14846392823004,0.86152399231815,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,1.73310971850765,0.498703936075477,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47309299120532,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,0.454999239389536,7.56160528267075,2.50447864973174,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,1.14846392823004,0.86152399231815,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,1.73310971850765,0.498703936075477,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47309299120532,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@Spsb1 | |||
}} | }} |
Latest revision as of 17:54, 26 September 2015
Short description: | p9@Spsb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Spsb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | 155bp_to_uc008vxf.1_5end |
EntrezGene: | Spsb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.09e-35 | 9 |
epithelial cell of alimentary canal | 5.09e-35 | 9 |
endo-epithelial cell | 3.22e-21 | 15 |
brush border epithelial cell | 1.37e-19 | 6 |
gut absorptive cell | 1.37e-19 | 6 |
enterocyte | 1.37e-19 | 6 |
epithelial cell | 3.44e-18 | 25 |
intestinal crypt stem cell | 1.31e-17 | 3 |
columnar/cuboidal epithelial cell | 6.59e-17 | 7 |
endodermal cell | 5.06e-16 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.09e-35 | 9 |
gastrointestinal system epithelium | 5.09e-35 | 9 |
intestinal epithelium | 5.09e-35 | 9 |
simple columnar epithelium | 9.39e-29 | 11 |
intestinal mucosa | 2.07e-24 | 13 |
wall of intestine | 2.07e-24 | 13 |
gastrointestinal system mucosa | 2.07e-24 | 13 |
mucosa | 3.22e-21 | 15 |
organ component layer | 2.05e-13 | 24 |
intestine | 1.85e-10 | 31 |
gastrointestinal system | 5.58e-07 | 47 |