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FFCP PHASE1:Mm9::chr11:102254865..102254876,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=51799
|EntrezGene=51799
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=O08576
|UniProt=O08576
|association_with_transcript=116bp_to_uc007lrq.2,uc007lrr.2_5end
|association_with_transcript=116bp_to_uc007lrq.2,uc007lrr.2_5end
|cluster_id=chr11:102254865..102254876,+
|description=CAGE_peak_3_at_Rundc3a_5end
|description=CAGE_peak_3_at_Rundc3a_5end
|id=chr11:102254865..102254876,+
|id=chr11:102254865..102254876,+
|ontology_enrichment_celltype=CL:0000221!9.98e-15!44;CL:0000133!9.98e-15!44;CL:0002319!1.39e-14!43;CL:0000540!3.70e-14!33;CL:0000047!3.70e-14!33;CL:0000031!3.70e-14!33;CL:0000404!3.70e-14!33;CL:0000055!2.84e-13!50;CL:0000393!4.24e-12!39;CL:0000211!4.24e-12!39;CL:0000117!1.79e-11!23;CL:0000337!1.79e-11!23
|ontology_enrichment_celltype=CL:0000221!9.98e-15!44;CL:0000133!9.98e-15!44;CL:0002319!1.39e-14!43;CL:0000540!3.70e-14!33;CL:0000047!3.70e-14!33;CL:0000031!3.70e-14!33;CL:0000404!3.70e-14!33;CL:0000055!2.84e-13!50;CL:0000393!4.24e-12!39;CL:0000211!4.24e-12!39;CL:0000117!1.79e-11!23;CL:0000337!1.79e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.47e-16,23;CL:0000337,3.47e-16,23;CL:0000540,2.09e-15,33;CL:0000047,2.09e-15,33;CL:0000031,2.09e-15,33;CL:0000404,2.09e-15,33;CL:0002319,9.16e-13,43;CL:0000221,2.49e-12,44;CL:0000133,2.49e-12,44;CL:0000393,3.97e-12,39;CL:0000211,3.97e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.04e-36!71;UBERON:0003075!6.04e-36!71;UBERON:0007284!6.04e-36!71;UBERON:0000073!1.03e-35!75;UBERON:0001016!1.03e-35!75;UBERON:0001017!1.29e-35!73;UBERON:0005743!1.29e-35!73;UBERON:0004121!8.05e-35!102;UBERON:0000924!8.05e-35!102;UBERON:0006601!8.05e-35!102;UBERON:0001049!5.99e-29!52;UBERON:0005068!5.99e-29!52;UBERON:0006241!5.99e-29!52;UBERON:0007135!5.99e-29!52;UBERON:0000955!1.41e-28!50;UBERON:0006238!1.41e-28!50;UBERON:0000033!3.70e-28!63;UBERON:0002616!1.07e-27!49;UBERON:0003056!1.51e-22!49;UBERON:0003080!1.26e-21!40;UBERON:0002780!7.57e-21!39;UBERON:0001890!7.57e-21!39;UBERON:0006240!7.57e-21!39;UBERON:0002020!3.88e-18!34;UBERON:0007811!2.15e-17!86;UBERON:0002791!1.34e-15!29;UBERON:0003528!1.34e-15!29;UBERON:0001893!1.34e-15!29;UBERON:0000153!2.36e-14!94;UBERON:0000956!3.35e-12!21;UBERON:0001869!3.35e-12!21;UBERON:0000203!3.35e-12!21;UBERON:0002619!3.32e-10!17;UBERON:0003076!1.01e-07!12;UBERON:0003057!1.01e-07!12;UBERON:0002021!1.65e-07!10;UBERON:0000411!1.65e-07!10;UBERON:0001950!1.65e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.49e-46,73;UBERON:0001016,3.59e-44,75;UBERON:0000073,5.17e-44,54;UBERON:0001049,6.30e-41,52;UBERON:0005068,6.30e-41,52;UBERON:0006241,6.30e-41,52;UBERON:0007135,6.30e-41,52;UBERON:0000955,1.05e-39,47;UBERON:0006238,1.05e-39,47;UBERON:0002346,2.82e-38,64;UBERON:0003075,2.82e-38,64;UBERON:0007284,2.82e-38,64;UBERON:0002616,5.12e-38,46;UBERON:0004121,3.67e-35,95;UBERON:0000924,3.67e-35,95;UBERON:0006601,3.67e-35,95;UBERON:0010371,4.88e-32,73;UBERON:0003080,5.94e-32,40;UBERON:0002780,1.97e-30,39;UBERON:0001890,1.97e-30,39;UBERON:0006240,1.97e-30,39;UBERON:0010314,6.93e-29,92;UBERON:0003056,7.04e-28,49;UBERON:0002020,2.43e-26,34;UBERON:0003528,8.87e-25,29;UBERON:0002791,8.87e-25,29;UBERON:0001893,8.87e-25,29;UBERON:0000956,7.23e-17,21;UBERON:0001869,7.23e-17,21;UBERON:0000203,7.23e-17,21;UBERON:0002619,1.23e-14,17;UBERON:0002021,4.16e-14,10;UBERON:0000411,4.16e-14,10;UBERON:0001950,4.16e-14,10;UBERON:0000025,1.69e-12,114;UBERON:0004111,5.69e-11,122;UBERON:0002420,4.71e-09,8;UBERON:0007245,4.71e-09,8;UBERON:0010009,4.71e-09,8;UBERON:0010011,4.71e-09,8;UBERON:0000454,4.71e-09,8;UBERON:0003076,5.98e-09,12;UBERON:0003057,5.98e-09,12;UBERON:0011216,6.37e-09,194;UBERON:0002950,2.57e-07,4;UBERON:0001891,2.57e-07,4;UBERON:0009616,2.57e-07,4;UBERON:0010286,2.57e-07,4;UBERON:0004733,8.74e-07,6;UBERON:0004732,8.74e-07,6;UBERON:0002028,8.74e-07,6;UBERON:0007277,8.74e-07,6
|phase1_expression=0.80074423552397,0,0,0,0,0.671517087647559,0.700837921786577,1.67860320474049,0,0.234064526321993,0,0,0.342401459862411,0,0,0.202475267389826,0,0,0,0,1.27564935226605,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.367093504323363,1.56478268869608,0.872100625521786,0.878744730937887,0.388859798148567,0,0,0,1.45072428402269,0,0,0,0,1.01158230429799,2.11596391708813,0.633831403506179,0.677689064138264,0,0,0,0,0.599200221036809,1.15265491596466,0.933206510776299,1.35005938331691,1.47227472945967,3.42781181284564,2.87129103237098,1.46988959057945,1.43768206527355,1.83843757322004,1.10115880999389,4.46905683298157,4.14737639791857,1.58263545276233,1.9212405156506,0,4.4669279840221,3.93933827022176,3.81995619442025,0.883885756421003,1.56608848879013,0.745597783301202,0.227178579999552,0.453429360640713,0.289864488701678,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,4.00793775475027,2.08182392119363,0.913396434936424,0.691846491768175,2.86373017049983,1.99900802130698,0.879666139307728,0.494389935468748,0,0,0,0,0,0,5.5628351432194,9.84399522023239,0,0,0,0,4.49371918214468,4.11750542536764,2.51308704225729,4.34560800480691,5.62574006126727,4.77912502486988,5.353961681236,0,0.124406970610093,0,0.210441855886474,0,0.689706313300419,0.360124259610698,1.35634336052144,0.680364991513279,0.640568601424249,0.468508622798644,1.81092359517311,0,0,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,0.720332286654991,0,0,0,0,0.515469845288373,0.605050573870028,0,0.380451252225118,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.280543279561274,0.126473074248515,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.318909537314974,0.327726629431476,0,0,0,0,0,0,2.88991061978026,3.16471553798949,0.491804836130026,0,1.57754109708128,1.17131623288992,0.861693590931196,0,0.668396022247182,1.41538265394416,0.809621403349789,2.04579100537918,0.790575555893047,8.9969968598106,0.425820255624806,0,0.162886959353576,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,1.78248689192361,0,0,0,5.7874732978144,0.720244376125241,0.646793418913773,1.07168517515796,0.709360934569094,1.24858172321449,1.64549020602121,2.43571959291679,0,0.21183207086382,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0.158167996790568,0.609958401380546,0.108005340821801,0.627264888043406,0,0.404593039154462,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0.129159823477731,0.337912250981556,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0.240390899039938,0,0,0.0762068066549998,0.100826185136841,0.292373642219257,0.288635524920988,0.116876902181569,0,0,0,0,0.19318959403219,0,0.36630324853453,0.214368379079066,0,5.0827665835536,3.68260189205742,1.71868654031819,3.43706364687375,1.37016503954128,3.7769694869485,6.07520250208625,1.35096360967266,3.62513927187364,3.10656187051092,0.207574695168353,0.798049746802062,0,0,0.628839487883947,0.183843508450014,0,0.824140228955577,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.128050304809739,0.402048282689293,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.581385666529314,0,0.25384382367503,0.182927972872773,0.263069711437843,0,0.561142271657738,0.474540072496697,0.591026894253381,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0,0.214871054048298,0.191288332068843,0,0
|phase1_expression=0.80074423552397,0,0,0,0,0.671517087647559,0.700837921786577,1.67860320474049,0,0.234064526321993,0,0,0.342401459862411,0,0,0.202475267389826,0,0,0,0,1.27564935226605,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.367093504323363,1.56478268869608,0.872100625521786,0.878744730937887,0.388859798148567,0,0,0,1.45072428402269,0,0,0,0,1.01158230429799,2.11596391708813,0.633831403506179,0.677689064138264,0,0,0,0,0.599200221036809,1.15265491596466,0.933206510776299,1.35005938331691,1.47227472945967,3.42781181284564,2.87129103237098,1.46988959057945,1.43768206527355,1.83843757322004,1.10115880999389,4.46905683298157,4.14737639791857,1.58263545276233,1.9212405156506,0,4.4669279840221,3.93933827022176,3.81995619442025,0.883885756421003,1.56608848879013,0.745597783301202,0.227178579999552,0.453429360640713,0.289864488701678,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,4.00793775475027,2.08182392119363,0.913396434936424,0.691846491768175,2.86373017049983,1.99900802130698,0.879666139307728,0.494389935468748,0,0,0,0,0,0,5.5628351432194,9.84399522023239,0,0,0,0,4.49371918214468,4.11750542536764,2.51308704225729,4.34560800480691,5.62574006126727,4.77912502486988,5.353961681236,0,0.124406970610093,0,0.210441855886474,0,0.689706313300419,0.360124259610698,1.35634336052144,0.680364991513279,0.640568601424249,0.468508622798644,1.81092359517311,0,0,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,0.720332286654991,0,0,0,0,0.515469845288373,0.605050573870028,0,0.380451252225118,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.280543279561274,0.126473074248515,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.318909537314974,0.327726629431476,0,0,0,0,0,0,2.88991061978026,3.16471553798949,0.491804836130026,0,1.57754109708128,1.17131623288992,0.861693590931196,0,0.668396022247182,1.41538265394416,0.809621403349789,2.04579100537918,0.790575555893047,8.9969968598106,0.425820255624806,0,0.162886959353576,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,1.78248689192361,0,0,0,5.7874732978144,0.720244376125241,0.646793418913773,1.07168517515796,0.709360934569094,1.24858172321449,1.64549020602121,2.43571959291679,0,0.21183207086382,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0.158167996790568,0.609958401380546,0.108005340821801,0.627264888043406,0,0.404593039154462,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0.129159823477731,0.337912250981556,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0.240390899039938,0,0,0.0762068066549998,0.100826185136841,0.292373642219257,0.288635524920988,0.116876902181569,0,0,0,0,0.19318959403219,0,0.36630324853453,0.214368379079066,0,5.0827665835536,3.68260189205742,1.71868654031819,3.43706364687375,1.37016503954128,3.7769694869485,6.07520250208625,1.35096360967266,3.62513927187364,3.10656187051092,0.207574695168353,0.798049746802062,0,0,0.628839487883947,0.183843508450014,0,0.824140228955577,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.128050304809739,0.402048282689293,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.581385666529314,0,0.25384382367503,0.182927972872773,0.263069711437843,0,0.561142271657738,0.474540072496697,0.591026894253381,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0,0.214871054048298,0.191288332068843,0,0
|short_description=p3@Rundc3a
|short_description=p3@Rundc3a
}}
}}

Latest revision as of 18:21, 26 September 2015

Short description:p3@Rundc3a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rundc3a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 116bp_to_uc007lrq.2, uc007lrr.2_5end
EntrezGene:Rundc3a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rundc3a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I29.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.47e-1623
neuroblast (sensu Vertebrata)3.47e-1623
neuron2.09e-1533
neuronal stem cell2.09e-1533
neuroblast2.09e-1533
electrically signaling cell2.09e-1533
neural cell9.16e-1343
ectodermal cell2.49e-1244
neurectodermal cell2.49e-1244
electrically responsive cell3.97e-1239
electrically active cell3.97e-1239

Uber anatomy
Ontology termp-valuen
central nervous system9.49e-4673
nervous system3.59e-4475
regional part of nervous system5.17e-4454
neural tube6.30e-4152
neural rod6.30e-4152
future spinal cord6.30e-4152
neural keel6.30e-4152
brain1.05e-3947
future brain1.05e-3947
neurectoderm2.82e-3864
neural plate2.82e-3864
presumptive neural plate2.82e-3864
regional part of brain5.12e-3846
ectoderm-derived structure3.67e-3595
ectoderm3.67e-3595
presumptive ectoderm3.67e-3595
ecto-epithelium4.88e-3273
anterior neural tube5.94e-3240
regional part of forebrain1.97e-3039
forebrain1.97e-3039
future forebrain1.97e-3039
structure with developmental contribution from neural crest6.93e-2992
pre-chordal neural plate7.04e-2849
gray matter2.43e-2634
brain grey matter8.87e-2529
regional part of telencephalon8.87e-2529
telencephalon8.87e-2529
cerebral cortex7.23e-1721
cerebral hemisphere7.23e-1721
pallium7.23e-1721
regional part of cerebral cortex1.23e-1417
occipital lobe4.16e-1410
visual cortex4.16e-1410
neocortex4.16e-1410
tube1.69e-12114
anatomical conduit5.69e-11122
basal ganglion4.71e-098
nuclear complex of neuraxis4.71e-098
aggregate regional part of brain4.71e-098
collection of basal ganglia4.71e-098
cerebral subcortex4.71e-098
posterior neural tube5.98e-0912
chordal neural plate5.98e-0912
organ system subdivision6.37e-09194
regional part of midbrain2.57e-074
midbrain2.57e-074
presumptive midbrain2.57e-074
midbrain neural tube2.57e-074
segmental subdivision of hindbrain8.74e-076
segmental subdivision of nervous system8.74e-076
hindbrain8.74e-076
presumptive hindbrain8.74e-076
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