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FFCP PHASE1:Mm9::chr2:51928415..51928426,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=51869
|EntrezGene=51869
|HGNC=
|HGNC=
|MCL_coexpression_id=64
|MCL_coexpression_id=64
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-165bp_to_ENSMUST00000126218_5end
|association_with_transcript=-165bp_to_ENSMUST00000126218_5end
|cluster_id=chr2:51928415..51928426,+
|description=CAGE_peak_4_at_Rif1_5end
|description=CAGE_peak_4_at_Rif1_5end
|id=chr2:51928415..51928426,+
|id=chr2:51928415..51928426,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000893,3.88e-08,6;CL:0002489,3.88e-08,6;CL:0000898,3.88e-08,6;CL:0000809,3.88e-08,6;CL:0000810,3.88e-08,6;CL:0000895,3.88e-08,6;CL:0000808,3.88e-08,6;CL:0000894,3.88e-08,6;CL:0000806,3.88e-08,6;CL:0000807,3.88e-08,6;CL:0000805,3.88e-08,6;CL:0002425,3.88e-08,6;CL:0002436,3.88e-08,6;CL:0002427,3.88e-08,6;CL:0002428,3.88e-08,6;CL:0002429,3.88e-08,6;CL:0002433,3.88e-08,6;CL:0002431,3.88e-08,6;CL:0002432,3.88e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000991!6.40e-08!18;UBERON:0005564!6.40e-08!18;UBERON:0004176!1.18e-07!17;UBERON:0009196!1.18e-07!17;UBERON:0009117!1.18e-07!17;UBERON:0000473!3.08e-07!14;UBERON:0001048!3.81e-07!147
|ontology_enrichment_uberon=UBERON:0000991!6.40e-08!18;UBERON:0005564!6.40e-08!18;UBERON:0004176!1.18e-07!17;UBERON:0009196!1.18e-07!17;UBERON:0009117!1.18e-07!17;UBERON:0000473!3.08e-07!14;UBERON:0001048!3.81e-07!147
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.65e-19,14;UBERON:0003135,6.84e-18,15;UBERON:0003101,1.17e-16,16;UBERON:0000079,1.17e-16,16;UBERON:0004176,1.44e-15,17;UBERON:0009196,1.44e-15,17;UBERON:0009117,1.44e-15,17;UBERON:0000991,1.34e-14,18;UBERON:0005564,1.34e-14,18;UBERON:0003133,1.74e-10,24;UBERON:0005156,1.54e-09,26;UBERON:0000990,1.54e-09,26;UBERON:0001048,1.21e-08,134;UBERON:0002553,1.43e-08,39;UBERON:0002323,1.28e-07,37;UBERON:0004458,1.28e-07,37;UBERON:0003886,2.30e-07,38
|phase1_expression=0.480446541314382,0,0,0.90739263392049,1.50268718983904,0.839396359559449,0.700837921786577,0.645616617207881,3.801295498095,5.14941957908386,1.02730780935303,1.11681022593471,0.171200729931206,0.34968160967599,0.999329285446988,0.404950534779652,0,0,0.411343300817216,0.84877930359606,0.765389611359628,0.297872853602656,0.522399578277871,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0,0,0,15.8481681015439,1.1554064790051,0.166234645358492,1.63335485009895,0,0.7813353445238,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0.388859798148567,0,0,0.503347818173209,0.725362142011344,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.142371680799103,0.372798891650601,0.302904773332736,0.453429360640713,0.869593466105033,1.72084775396277,0,0,0,0.448026887097336,0.421333260395256,0.170430322578058,0,0,0.14084341977668,0,0,0,1.73192832808971,0.253359865475099,0,0.5709193985953,0,0.148442139064825,0.520455980298408,0,0.230615497256059,0.150722640552623,0.470354828542819,0,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,1.17112318804619,1.25668024088073,0.255457055208591,0.479260498023681,0,0.381210681219194,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0,0,0.407357455401265,0,0,0.210441855886474,0.520481771850815,1.37941262660084,0.180062129805349,1.35634336052144,0.680364991513279,0.896796041993948,1.12442069471675,0.258703370739016,0.646703978798527,0.567318240503458,0.527853372491847,0,0.278047249225598,0,0.411564272815887,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0,0.787056926989615,0.154267112887378,0,0.268273401399619,0,0,0.32833492815819,0.243206428637567,0.584799949701329,0.219550115291051,0.268412837520744,0.420579897128254,0,0,0.528901133327089,0.639864751605702,0.696710015581316,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0.398282546508734,0.189667900953082,1.37098215131675,0,0.610953983535943,0.193952487167626,0.771494018793504,0.189709611372772,0.295220295959204,0.156998727841375,0.123397163921801,0.592905254174298,0.166845105716094,0.393117990226406,0,0.202860121388503,0.241177159752417,1.01850340712568,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0,0.358794827043824,0,0,0.568474235311454,0.488894929326078,1.18821560042632,0.704070744865506,0.837531287209079,0.952174563544055,0.780534591431195,0,0.221464689648775,0.478364305972461,0.163863314715738,0.690739927463582,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0.327869890753351,0,0.94652465824877,0.390438744296638,0.646270193198397,0.955875191810208,0.668396022247182,0.283076530788832,0,0.584511715822624,0.395287777946524,0,0.425820255624806,0.35613120733451,0.977321756121456,0.494910368917606,0,0.971122544619926,0,0,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0.316036757935816,2.10837217149998,0,0,0.36012218806262,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0.220528398054962,0.49465875882444,0.161464426695906,0.120625849856312,0.477489376012546,0.164140899745061,0.874442509889552,0,0,0.412773735926445,0.185194527369712,0.188368457004691,0.683471138605126,0.457556346413045,0.679913719975421,0.839708713941948,0.690999869022119,0,0.632671987162271,0.406638934253697,0.432021363287205,0.209088296014469,0,0.539457385539283,0.247960367176008,0,0,1.24267862617385,2.81846469342095,0.747582730219894,1.15820943319968,0.972255941720238,1.16243841129958,1.01373675294467,1.64300134104056,1.17183946359555,2.30690557736564,3.62376181239009,2.01621004380506,0.948033361884535,0.202725215290164,0.102710957164827,0.25984164595559,0.537080087002444,0.79472541912506,0.480781798079875,0.295379054349154,0.201932899896295,0.457240839929999,0.604957110821043,0.877120926657772,1.05833025804362,0.467507608726276,0,0.443971906748129,0,0.335769232728157,0.19318959403219,0,0.36630324853453,0,1.00314420807073,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.972426868273176,0,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0,0.377252682772152,0.37456602987953,0.320125762024346,0.229741875822453,0,0.347652977834566,0.578727661391115,0.824171801606613,0.294397840268795,0.342869252385415,0.532427418478012,0,0.581385666529314,0.0941093804153306,0.423073039458382,0,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.197008964751127,0.818462086339379,0.154936841185966,0,0.249810577937946,0.233931608445408,0.859484216193193,0,0,0
|phase1_expression=0.480446541314382,0,0,0.90739263392049,1.50268718983904,0.839396359559449,0.700837921786577,0.645616617207881,3.801295498095,5.14941957908386,1.02730780935303,1.11681022593471,0.171200729931206,0.34968160967599,0.999329285446988,0.404950534779652,0,0,0.411343300817216,0.84877930359606,0.765389611359628,0.297872853602656,0.522399578277871,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0,0,0,15.8481681015439,1.1554064790051,0.166234645358492,1.63335485009895,0,0.7813353445238,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0.388859798148567,0,0,0.503347818173209,0.725362142011344,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.142371680799103,0.372798891650601,0.302904773332736,0.453429360640713,0.869593466105033,1.72084775396277,0,0,0,0.448026887097336,0.421333260395256,0.170430322578058,0,0,0.14084341977668,0,0,0,1.73192832808971,0.253359865475099,0,0.5709193985953,0,0.148442139064825,0.520455980298408,0,0.230615497256059,0.150722640552623,0.470354828542819,0,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,1.17112318804619,1.25668024088073,0.255457055208591,0.479260498023681,0,0.381210681219194,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0,0,0.407357455401265,0,0,0.210441855886474,0.520481771850815,1.37941262660084,0.180062129805349,1.35634336052144,0.680364991513279,0.896796041993948,1.12442069471675,0.258703370739016,0.646703978798527,0.567318240503458,0.527853372491847,0,0.278047249225598,0,0.411564272815887,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0,0.787056926989615,0.154267112887378,0,0.268273401399619,0,0,0.32833492815819,0.243206428637567,0.584799949701329,0.219550115291051,0.268412837520744,0.420579897128254,0,0,0.528901133327089,0.639864751605702,0.696710015581316,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0.398282546508734,0.189667900953082,1.37098215131675,0,0.610953983535943,0.193952487167626,0.771494018793504,0.189709611372772,0.295220295959204,0.156998727841375,0.123397163921801,0.592905254174298,0.166845105716094,0.393117990226406,0,0.202860121388503,0.241177159752417,1.01850340712568,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0,0.358794827043824,0,0,0.568474235311454,0.488894929326078,1.18821560042632,0.704070744865506,0.837531287209079,0.952174563544055,0.780534591431195,0,0.221464689648775,0.478364305972461,0.163863314715738,0.690739927463582,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0.327869890753351,0,0.94652465824877,0.390438744296638,0.646270193198397,0.955875191810208,0.668396022247182,0.283076530788832,0,0.584511715822624,0.395287777946524,0,0.425820255624806,0.35613120733451,0.977321756121456,0.494910368917606,0,0.971122544619926,0,0,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0.316036757935816,2.10837217149998,0,0,0.36012218806262,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0.220528398054962,0.49465875882444,0.161464426695906,0.120625849856312,0.477489376012546,0.164140899745061,0.874442509889552,0,0,0.412773735926445,0.185194527369712,0.188368457004691,0.683471138605126,0.457556346413045,0.679913719975421,0.839708713941948,0.690999869022119,0,0.632671987162271,0.406638934253697,0.432021363287205,0.209088296014469,0,0.539457385539283,0.247960367176008,0,0,1.24267862617385,2.81846469342095,0.747582730219894,1.15820943319968,0.972255941720238,1.16243841129958,1.01373675294467,1.64300134104056,1.17183946359555,2.30690557736564,3.62376181239009,2.01621004380506,0.948033361884535,0.202725215290164,0.102710957164827,0.25984164595559,0.537080087002444,0.79472541912506,0.480781798079875,0.295379054349154,0.201932899896295,0.457240839929999,0.604957110821043,0.877120926657772,1.05833025804362,0.467507608726276,0,0.443971906748129,0,0.335769232728157,0.19318959403219,0,0.36630324853453,0,1.00314420807073,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.972426868273176,0,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0,0.377252682772152,0.37456602987953,0.320125762024346,0.229741875822453,0,0.347652977834566,0.578727661391115,0.824171801606613,0.294397840268795,0.342869252385415,0.532427418478012,0,0.581385666529314,0.0941093804153306,0.423073039458382,0,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.197008964751127,0.818462086339379,0.154936841185966,0,0.249810577937946,0.233931608445408,0.859484216193193,0,0,0
|short_description=p4@Rif1
|short_description=p4@Rif1
}}
}}

Latest revision as of 18:22, 26 September 2015

Short description:p4@Rif1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rif1_5end
Coexpression cluster:MCL_coexpression_mm9:64
Association with transcript: -165bp_to_ENSMUST00000126218_5end
EntrezGene:Rif1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rif1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
testis2.65e-1914
male reproductive organ6.84e-1815
male organism1.17e-1616
male reproductive system1.17e-1616
external genitalia1.44e-1517
indifferent external genitalia1.44e-1517
indifferent gonad1.44e-1517
gonad1.34e-1418
gonad primordium1.34e-1418
reproductive organ1.74e-1024
reproductive structure1.54e-0926
reproductive system1.54e-0926
primordium1.21e-08134
anatomical cavity1.43e-0839
body cavity1.28e-0737
body cavity or lining1.28e-0737
body cavity precursor2.30e-0738
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