FFCP PHASE1:Mm9::chr11:102962902..102962909,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72469 | |EntrezGene=72469 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000142970_5end | |association_with_transcript=0bp_to_ENSMUST00000142970_5end | ||
|cluster_id=chr11:102962902..102962909,- | |||
|description=CAGE_peak_2_at_Plcd3_5end | |description=CAGE_peak_2_at_Plcd3_5end | ||
|id=chr11:102962902..102962909,- | |id=chr11:102962902..102962909,- | ||
|ontology_enrichment_celltype=CL:0000333!1.05e-08!10;CL:0000095!1.05e-08!10;CL:0000243!1.05e-08!10;CL:0000123!1.05e-08!10;CL:0000125!1.05e-08!10;CL:0000030!1.05e-08!10;CL:0000339!1.05e-08!10;CL:0002453!1.76e-08!8;CL:0000128!8.17e-07!6;CL:0000126!8.17e-07!6;CL:0000127!8.17e-07!6 | |ontology_enrichment_celltype=CL:0000333!1.05e-08!10;CL:0000095!1.05e-08!10;CL:0000243!1.05e-08!10;CL:0000123!1.05e-08!10;CL:0000125!1.05e-08!10;CL:0000030!1.05e-08!10;CL:0000339!1.05e-08!10;CL:0002453!1.76e-08!8;CL:0000128!8.17e-07!6;CL:0000126!8.17e-07!6;CL:0000127!8.17e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,9.85e-22,8;CL:0000128,2.15e-20,6;CL:0000126,2.15e-20,6;CL:0000127,2.15e-20,6;CL:0000333,2.64e-17,10;CL:0000095,2.64e-17,10;CL:0000243,2.64e-17,10;CL:0000123,2.64e-17,10;CL:0000125,2.64e-17,10;CL:0000030,2.64e-17,10;CL:0000339,2.64e-17,10;CL:0000349,1.35e-14,3;CL:0000351,1.35e-14,3;CL:0000068,2.07e-14,3;CL:0002202,2.07e-14,3;CL:0000069,2.07e-14,3;CL:0002632,2.07e-14,3;CL:0002368,2.07e-14,3;CL:0000307,2.07e-14,3;CL:0000377,2.07e-14,3;CL:0002605,7.44e-11,2;CL:0002604,7.44e-11,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.35e-14,3;UBERON:0000307,1.35e-14,3;UBERON:0007010,1.35e-14,3;UBERON:0003126,2.07e-14,3;UBERON:0001005,2.07e-14,3;UBERON:0007196,2.07e-14,3;UBERON:0001558,2.07e-14,3;UBERON:0010147,9.78e-10,2;UBERON:0003937,9.78e-10,2;UBERON:0005399,9.78e-10,2;UBERON:0000162,2.72e-07,3;UBERON:0001353,2.72e-07,3;UBERON:0000163,2.72e-07,3;UBERON:0006866,2.72e-07,3;UBERON:0001046,2.72e-07,3;UBERON:0000164,2.72e-07,3;UBERON:0000931,2.72e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0,7.04152209913235,0.872100625521786,2.41654801007919,3.11087838518853,2.37976916763116,1.43752564364972,0,0,0,0,0,0,0,0,0,2.37191172448392,0.889294796111139,0,0,0,0.898800331555214,2.68952813725088,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0.227178579999552,0.151143120213571,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,1.08245520505607,1.01343946190039,3.53867111510348,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0,0,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0.127070227073065,0,0.457500602818626,0,0,0.511430914660661,0,0.324482526135515,0.101839363850316,0.248813941220186,0.758168275301024,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,1.29351685369508,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.583826711835847,0.329119699826961,0.985004784474571,0.162137619091711,1.02339991197733,0.439100230582101,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.321101179975584,0.117211686592203,0,0.757412781613119,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0.178065603667255,0.651547837414304,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.643011105094777,0.532020700926821,0.178368817602071,0.493647061806363,0.608929898229199,0.938686832254841,0.42366414172764,1.10264199027481,0.98931751764888,0,0.0603129249281559,0.596861720015682,1.14898629821543,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0.539457385539283,0.165306911450672,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0.419437377702843,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.453460767230423,1.77588762699252,1.34570784914214,1.17519231454855,0.579568782096571,0,0.549454872801795,3.64426244434412,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0.476293691283074,0.347652977834566,0,0.412085900803307,0.294397840268795,0,0,0,0,0.282328141245992,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0.882365676478062,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0,7.04152209913235,0.872100625521786,2.41654801007919,3.11087838518853,2.37976916763116,1.43752564364972,0,0,0,0,0,0,0,0,0,2.37191172448392,0.889294796111139,0,0,0,0.898800331555214,2.68952813725088,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0.227178579999552,0.151143120213571,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,1.08245520505607,1.01343946190039,3.53867111510348,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0,0,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0.127070227073065,0,0.457500602818626,0,0,0.511430914660661,0,0.324482526135515,0.101839363850316,0.248813941220186,0.758168275301024,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,1.29351685369508,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.583826711835847,0.329119699826961,0.985004784474571,0.162137619091711,1.02339991197733,0.439100230582101,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.321101179975584,0.117211686592203,0,0.757412781613119,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0.178065603667255,0.651547837414304,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.643011105094777,0.532020700926821,0.178368817602071,0.493647061806363,0.608929898229199,0.938686832254841,0.42366414172764,1.10264199027481,0.98931751764888,0,0.0603129249281559,0.596861720015682,1.14898629821543,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0.539457385539283,0.165306911450672,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0.419437377702843,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.453460767230423,1.77588762699252,1.34570784914214,1.17519231454855,0.579568782096571,0,0.549454872801795,3.64426244434412,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0.476293691283074,0.347652977834566,0,0.412085900803307,0.294397840268795,0,0,0,0,0.282328141245992,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0.882365676478062,0 | ||
|short_description=p2@Plcd3 | |short_description=p2@Plcd3 | ||
}} | }} |
Latest revision as of 18:56, 26 September 2015
Short description: | p2@Plcd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Plcd3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000142970_5end |
EntrezGene: | Plcd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 9.85e-22 | 8 |
oligodendrocyte | 2.15e-20 | 6 |
macroglial cell | 2.15e-20 | 6 |
astrocyte | 2.15e-20 | 6 |
migratory neural crest cell | 2.64e-17 | 10 |
neuron associated cell | 2.64e-17 | 10 |
glial cell (sensu Vertebrata) | 2.64e-17 | 10 |
neuron associated cell (sensu Vertebrata) | 2.64e-17 | 10 |
glial cell | 2.64e-17 | 10 |
glioblast | 2.64e-17 | 10 |
glioblast (sensu Vertebrata) | 2.64e-17 | 10 |
extraembryonic cell | 1.35e-14 | 3 |
trophoblast cell | 1.35e-14 | 3 |
duct epithelial cell | 2.07e-14 | 3 |
epithelial cell of tracheobronchial tree | 2.07e-14 | 3 |
branched duct epithelial cell | 2.07e-14 | 3 |
epithelial cell of lower respiratory tract | 2.07e-14 | 3 |
respiratory epithelial cell | 2.07e-14 | 3 |
tracheal epithelial cell | 2.07e-14 | 3 |
tracheoblast | 2.07e-14 | 3 |
astrocyte of the cerebral cortex | 7.44e-11 | 2 |
astrocyte of the hippocampus | 7.44e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.35e-14 | 3 |
blastula | 1.35e-14 | 3 |
cleaving embryo | 1.35e-14 | 3 |
trachea | 2.07e-14 | 3 |
respiratory airway | 2.07e-14 | 3 |
tracheobronchial tree | 2.07e-14 | 3 |
lower respiratory tract | 2.07e-14 | 3 |
male accessory sex gland | 9.78e-10 | 2 |
sex gland | 9.78e-10 | 2 |
male reproductive gland | 9.78e-10 | 2 |
cloaca | 2.72e-07 | 3 |
anal region | 2.72e-07 | 3 |
embryonic cloaca | 2.72e-07 | 3 |
terminal part of digestive tract | 2.72e-07 | 3 |
hindgut | 2.72e-07 | 3 |
primitive urogenital sinus | 2.72e-07 | 3 |
proctodeum | 2.72e-07 | 3 |