FFCP PHASE1:Mm9::chr7:51591154..51591182,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=243961 | |EntrezGene=243961 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-203bp_to_ENSMUST00000134470_5end | |association_with_transcript=-203bp_to_ENSMUST00000134470_5end | ||
|cluster_id=chr7:51591154..51591182,+ | |||
|description=CAGE_peak_2_at_Shank1_5end | |description=CAGE_peak_2_at_Shank1_5end | ||
|id=chr7:51591154..51591182,+ | |id=chr7:51591154..51591182,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.07e-16!23;CL:0000337!2.07e-16!23;CL:0000540!2.92e-15!33;CL:0000047!2.92e-15!33;CL:0000031!2.92e-15!33;CL:0000404!2.92e-15!33;CL:0000393!3.79e-11!39;CL:0000211!3.79e-11!39;CL:0000221!2.20e-09!44;CL:0000133!2.20e-09!44;CL:0002319!4.07e-09!43 | |ontology_enrichment_celltype=CL:0000117!2.07e-16!23;CL:0000337!2.07e-16!23;CL:0000540!2.92e-15!33;CL:0000047!2.92e-15!33;CL:0000031!2.92e-15!33;CL:0000404!2.92e-15!33;CL:0000393!3.79e-11!39;CL:0000211!3.79e-11!39;CL:0000221!2.20e-09!44;CL:0000133!2.20e-09!44;CL:0002319!4.07e-09!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.29e-18,23;CL:0000337,2.29e-18,23;CL:0000540,5.02e-11,33;CL:0000047,5.02e-11,33;CL:0000031,5.02e-11,33;CL:0000404,5.02e-11,33;CL:0000393,1.73e-08,39;CL:0000211,1.73e-08,39;CL:0002319,3.26e-07,43;CL:0000221,6.20e-07,44;CL:0000133,6.20e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.26e-35!71;UBERON:0003075!4.26e-35!71;UBERON:0007284!4.26e-35!71;UBERON:0004121!3.95e-31!102;UBERON:0000924!3.95e-31!102;UBERON:0006601!3.95e-31!102;UBERON:0001017!4.26e-31!73;UBERON:0005743!4.26e-31!73;UBERON:0000033!1.56e-30!63;UBERON:0000073!1.41e-29!75;UBERON:0001016!1.41e-29!75;UBERON:0001049!1.52e-28!52;UBERON:0005068!1.52e-28!52;UBERON:0006241!1.52e-28!52;UBERON:0007135!1.52e-28!52;UBERON:0000955!5.42e-27!50;UBERON:0006238!5.42e-27!50;UBERON:0002616!3.18e-26!49;UBERON:0003056!3.28e-26!49;UBERON:0003080!1.01e-21!40;UBERON:0002780!9.11e-21!39;UBERON:0001890!9.11e-21!39;UBERON:0006240!9.11e-21!39;UBERON:0002020!2.88e-20!34;UBERON:0007811!6.44e-17!86;UBERON:0002791!2.70e-16!29;UBERON:0003528!2.70e-16!29;UBERON:0001893!2.70e-16!29;UBERON:0000153!1.11e-13!94;UBERON:0000956!1.50e-10!21;UBERON:0001869!1.50e-10!21;UBERON:0000203!1.50e-10!21;UBERON:0002619!6.66e-09!17;UBERON:0002021!1.47e-08!10;UBERON:0000411!1.47e-08!10;UBERON:0001950!1.47e-08!10;UBERON:0003076!2.97e-07!12;UBERON:0003057!2.97e-07!12;UBERON:0002420!3.48e-07!8;UBERON:0007245!3.48e-07!8;UBERON:0010009!3.48e-07!8;UBERON:0010011!3.48e-07!8;UBERON:0000454!3.48e-07!8;UBERON:0002298!8.67e-07!6 | |ontology_enrichment_uberon=UBERON:0002346!4.26e-35!71;UBERON:0003075!4.26e-35!71;UBERON:0007284!4.26e-35!71;UBERON:0004121!3.95e-31!102;UBERON:0000924!3.95e-31!102;UBERON:0006601!3.95e-31!102;UBERON:0001017!4.26e-31!73;UBERON:0005743!4.26e-31!73;UBERON:0000033!1.56e-30!63;UBERON:0000073!1.41e-29!75;UBERON:0001016!1.41e-29!75;UBERON:0001049!1.52e-28!52;UBERON:0005068!1.52e-28!52;UBERON:0006241!1.52e-28!52;UBERON:0007135!1.52e-28!52;UBERON:0000955!5.42e-27!50;UBERON:0006238!5.42e-27!50;UBERON:0002616!3.18e-26!49;UBERON:0003056!3.28e-26!49;UBERON:0003080!1.01e-21!40;UBERON:0002780!9.11e-21!39;UBERON:0001890!9.11e-21!39;UBERON:0006240!9.11e-21!39;UBERON:0002020!2.88e-20!34;UBERON:0007811!6.44e-17!86;UBERON:0002791!2.70e-16!29;UBERON:0003528!2.70e-16!29;UBERON:0001893!2.70e-16!29;UBERON:0000153!1.11e-13!94;UBERON:0000956!1.50e-10!21;UBERON:0001869!1.50e-10!21;UBERON:0000203!1.50e-10!21;UBERON:0002619!6.66e-09!17;UBERON:0002021!1.47e-08!10;UBERON:0000411!1.47e-08!10;UBERON:0001950!1.47e-08!10;UBERON:0003076!2.97e-07!12;UBERON:0003057!2.97e-07!12;UBERON:0002420!3.48e-07!8;UBERON:0007245!3.48e-07!8;UBERON:0010009!3.48e-07!8;UBERON:0010011!3.48e-07!8;UBERON:0000454!3.48e-07!8;UBERON:0002298!8.67e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.19e-35,54;UBERON:0002346,5.67e-34,64;UBERON:0003075,5.67e-34,64;UBERON:0007284,5.67e-34,64;UBERON:0001049,8.59e-33,52;UBERON:0005068,8.59e-33,52;UBERON:0006241,8.59e-33,52;UBERON:0007135,8.59e-33,52;UBERON:0001017,3.26e-31,73;UBERON:0001016,5.28e-30,75;UBERON:0004121,2.40e-28,95;UBERON:0000924,2.40e-28,95;UBERON:0006601,2.40e-28,95;UBERON:0010371,4.27e-28,73;UBERON:0000955,2.08e-26,47;UBERON:0006238,2.08e-26,47;UBERON:0002020,1.85e-25,34;UBERON:0002616,2.50e-25,46;UBERON:0003056,2.98e-25,49;UBERON:0003080,5.53e-22,40;UBERON:0002780,1.16e-20,39;UBERON:0001890,1.16e-20,39;UBERON:0006240,1.16e-20,39;UBERON:0010314,1.35e-20,92;UBERON:0003528,1.72e-19,29;UBERON:0002791,1.72e-19,29;UBERON:0001893,1.72e-19,29;UBERON:0002021,1.35e-12,10;UBERON:0000411,1.35e-12,10;UBERON:0001950,1.35e-12,10;UBERON:0002619,2.20e-12,17;UBERON:0003076,2.82e-11,12;UBERON:0003057,2.82e-11,12;UBERON:0000956,4.72e-11,21;UBERON:0001869,4.72e-11,21;UBERON:0000203,4.72e-11,21;UBERON:0002420,1.95e-10,8;UBERON:0007245,1.95e-10,8;UBERON:0010009,1.95e-10,8;UBERON:0010011,1.95e-10,8;UBERON:0000454,1.95e-10,8;UBERON:0002240,6.09e-09,6;UBERON:0005174,6.09e-09,6;UBERON:0001137,6.09e-09,6;UBERON:0000025,1.19e-08,114;UBERON:0001948,1.71e-07,5;UBERON:0002315,1.71e-07,5;UBERON:0004111,2.10e-07,122;UBERON:0002950,4.66e-07,4;UBERON:0001891,4.66e-07,4;UBERON:0009616,4.66e-07,4;UBERON:0010286,4.66e-07,4 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5204559646991,11.1088105647127,8.87363964908651,0,0,0,0,0,0,0,0.829516898467821,0.540023753326763,0.841299845405528,19.4242669394586,17.0068776532742,0.734944795289724,1.15014565221884,1.83843757322004,38.540558349786,36.0078293400229,38.2480267808046,10.9465618816061,8.41686321142169,8.33461392890816,30.7101298901519,22.5105044012672,24.2949213965128,13.258286346315,13.810053037513,10.0655700745662,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0,1.63286352971307,0.346970653532272,0.304465478312141,0.230615497256059,0.753613202763113,0.940709657085638,0.502666365318702,0,0,0,0,0,0,0,18.4451902117275,11.9384622883669,0,0,0,0,53.1756769887121,11.8950156732843,2.01046963380583,21.2065670634577,16.3657892691412,36.5706958424826,20.4423991465375,0,0,0,2.31486041475121,0.130120442962704,0.689706313300419,0.720248519221397,2.71268672104287,3.12967896096108,3.33095672740609,2.06143794031403,8.53721123438752,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2527577368216,2.98423375899925,0,0,0,0,0.257734922644187,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,34.3578262573875,35.8667760972142,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,9.96096080907602,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,8.17055053809091,0.18006109403131,0.129358683782755,0.643011105094777,0.532020700926821,0.891844088010353,2.63278432963394,5.48036908406279,0,0,0,0,0,0,0,0,0,43.3895206704593,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0.330613822901344,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,5.9842280745933,9.73922372846974,3.60891682921744,10.9613203163303,18.1294535373528,12.1504050041725,15.7612421128477,12.6879874515577,22.7814537170801,0.415149390336707,2.39414924040619,1.02440163452481,1.45864030240976,1.25767897576789,0.919217542250071,0.888986911206461,1.03017528619447,1.60459604795908,1.01078884705519,0.50695859978048,1.50901073108861,0.561849044819294,0.960377286073039,0.804096565378586,0.476293691283074,1.27472758539341,0.38581844092741,2.06042950401653,1.17759136107518,1.02860775715625,0.177475806159338,1.66905332963125,1.0174249164263,0.941093804153306,0.761531471025089,0.548783918618318,0.526139422875686,1.35804113845862,2.24456908663095,0.949080144993393,1.0835493061312,0.818462086339379,1.23949472948773,0.771626443924566,0.999242311751784,0.935726433781634,0.644613162144895,0.57386499620653,0.661774257358546,0.695603506861264 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| ||
|short_description=p2@Shank1 | |short_description=p2@Shank1 | ||
}} | }} |
Latest revision as of 19:07, 26 September 2015
Short description: | p2@Shank1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Shank1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -203bp_to_ENSMUST00000134470_5end |
EntrezGene: | Shank1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.29e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.29e-18 | 23 |
neuron | 5.02e-11 | 33 |
neuronal stem cell | 5.02e-11 | 33 |
neuroblast | 5.02e-11 | 33 |
electrically signaling cell | 5.02e-11 | 33 |
electrically responsive cell | 1.73e-08 | 39 |
electrically active cell | 1.73e-08 | 39 |
neural cell | 3.26e-07 | 43 |
ectodermal cell | 6.20e-07 | 44 |
neurectodermal cell | 6.20e-07 | 44 |