FFCP PHASE1:Mm9::chr1:179372625..179372654,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:179372625..179372654,+ to FFCP PHASE1:Mm9::chr1:179372625..179372654,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=30928 | |EntrezGene=30928 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WUK6 | |UniProt=Q9WUK6 | ||
|association_with_transcript=87bp_to_uc007dul.1_5end | |||
|cluster_id=chr1:179372625..179372654,+ | |||
|description=CAGE_peak_4_at_Zfp238_5end | |||
|id=chr1:179372625..179372654,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.47e-11!44;CL:0000133!1.47e-11!44;CL:0002319!2.07e-11!43;CL:0000540!6.64e-10!33;CL:0000047!6.64e-10!33;CL:0000031!6.64e-10!33;CL:0000404!6.64e-10!33;CL:0000055!3.17e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.09e-18,43;CL:0000221,2.03e-17,44;CL:0000133,2.03e-17,44;CL:0000540,9.19e-16,33;CL:0000047,9.19e-16,33;CL:0000031,9.19e-16,33;CL:0000404,9.19e-16,33;CL:0000393,7.60e-12,39;CL:0000211,7.60e-12,39;CL:0000117,9.18e-09,23;CL:0000337,9.18e-09,23;CL:0000107,2.12e-08,9;CL:0002609,7.86e-08,6;CL:0002321,8.05e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.67e-21!73;UBERON:0005743!5.67e-21!73;UBERON:0000073!1.60e-19!75;UBERON:0001016!1.60e-19!75;UBERON:0002346!3.64e-17!71;UBERON:0003075!3.64e-17!71;UBERON:0007284!3.64e-17!71;UBERON:0004121!2.06e-16!102;UBERON:0000924!2.06e-16!102;UBERON:0006601!2.06e-16!102;UBERON:0001049!1.90e-14!52;UBERON:0005068!1.90e-14!52;UBERON:0006241!1.90e-14!52;UBERON:0007135!1.90e-14!52;UBERON:0002020!2.23e-14!34;UBERON:0003056!6.41e-14!49;UBERON:0000033!3.57e-13!63;UBERON:0000956!1.08e-12!21;UBERON:0001869!1.08e-12!21;UBERON:0000203!1.08e-12!21;UBERON:0002791!2.62e-12!29;UBERON:0003528!2.62e-12!29;UBERON:0001893!2.62e-12!29;UBERON:0000955!1.17e-10!50;UBERON:0006238!1.17e-10!50;UBERON:0002616!1.64e-10!49;UBERON:0002780!2.36e-10!39;UBERON:0001890!2.36e-10!39;UBERON:0006240!2.36e-10!39;UBERON:0002619!2.55e-10!17;UBERON:0003080!3.01e-10!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.36e-27,73;UBERON:0004121,2.37e-26,95;UBERON:0000924,2.37e-26,95;UBERON:0006601,2.37e-26,95;UBERON:0002346,2.46e-26,64;UBERON:0003075,2.46e-26,64;UBERON:0007284,2.46e-26,64;UBERON:0001016,2.55e-26,75;UBERON:0002020,4.37e-22,34;UBERON:0010371,7.26e-22,73;UBERON:0003056,1.42e-19,49;UBERON:0003528,7.09e-19,29;UBERON:0002791,7.09e-19,29;UBERON:0001893,7.09e-19,29;UBERON:0000956,9.70e-19,21;UBERON:0001869,9.70e-19,21;UBERON:0000203,9.70e-19,21;UBERON:0001049,5.34e-18,52;UBERON:0005068,5.34e-18,52;UBERON:0006241,5.34e-18,52;UBERON:0007135,5.34e-18,52;UBERON:0000073,7.07e-16,54;UBERON:0002619,4.49e-15,17;UBERON:0002780,1.28e-14,39;UBERON:0001890,1.28e-14,39;UBERON:0006240,1.28e-14,39;UBERON:0002616,1.38e-14,46;UBERON:0000955,4.96e-14,47;UBERON:0006238,4.96e-14,47;UBERON:0003080,5.42e-14,40;UBERON:0010314,9.80e-14,92;UBERON:0002021,4.33e-09,10;UBERON:0000411,4.33e-09,10;UBERON:0001950,4.33e-09,10;UBERON:0002410,2.12e-08,9;UBERON:0001954,2.00e-07,7;UBERON:0003022,2.00e-07,7;UBERON:0002421,2.00e-07,7;UBERON:0000349,2.00e-07,7;UBERON:0002600,2.00e-07,7;UBERON:0000970,8.18e-07,9;UBERON:0000019,8.18e-07,9;UBERON:0000047,8.18e-07,9;UBERON:0010312,8.18e-07,9;UBERON:0004088,8.18e-07,9;UBERON:0002104,8.18e-07,9;UBERON:0001456,8.18e-07,9;UBERON:0003072,8.18e-07,9;UBERON:0004128,8.18e-07,9;UBERON:0003071,8.18e-07,9 | |||
|phase1_expression=1.44133962394315,0.348975407639361,0,0.30246421130683,0,0,0.934450562382103,0,0.281577444303333,0,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0.202475267389826,0,0.630924330716475,0.685572168028694,0.42438965179803,1.27564935226605,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0,0.202753862439029,0.183546752161682,0.782391344348039,3.2703773457067,1.97717564461025,2.13872888981712,1.67983705950435,2.87505128729943,0.671130424230945,0,0,0,0.286533439938757,0,1.82084814773638,2.11596391708813,1.90149421051854,0.338844532069132,0,0,0,0,1.49800055259202,1.92109152660777,14.5165457231869,13.9056116481641,14.7227472945967,1.71390590642282,1.10434270475807,5.87955836231779,6.70918297127655,7.35375029288017,0,0.766124028511126,0,2.2420668914133,2.56165402086747,0,0.837548997004143,0,1.22238598221448,2.65165726926301,2.42031857358475,2.23679334990361,0.151452386666368,0.151143120213571,0.869593466105033,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0.421333260395256,0.170430322578058,0.519572009205738,0.70667914902068,0.985903938436763,0,0,0,0.432982082022428,0.253359865475099,0,0.45673551887624,0.517875767294343,0,0.520455980298408,0.608930956624282,0.691846491768175,0,0.470354828542819,0.251333182659351,0.247194967734374,0.433798070759735,0.884610551949874,1.61766849947409,0.220841518460394,2.42437626567611,1.86391761218122,2.34224637609238,5.65506108396329,0.255457055208591,0.718890747035522,1.79970819298022,1.77898317902291,0.599162557619291,2.28750301409313,3.5183218591602,1.56441888173049,3.06858548796397,0.41557608911912,1.29793010454206,0.712875546952214,0.497627882440372,0.252722758433675,1.05220927943237,1.17108398666433,2.29902104433473,1.98068342785884,2.10986744970001,4.28629944653366,5.12454881139399,5.34099829990454,1.03481348295606,0.215567992932842,0.945530400839096,0.527853372491847,0.876782929710299,0.556094498451196,1.74126083261083,0.823128545631774,0.199034266818493,1.40442637462647,1.80143534980301,0.852490498186778,0.621377317606506,0.469052119962192,0.540186184383045,0.473489471170421,0.393528463494808,0.154267112887378,0,0.268273401399619,0.233530684734339,0.822799249567402,0.492502392237286,0.56748166682099,0.292399974850665,0,0.134206418760372,2.10289948564127,9.77593817603202,0,0,0.426576501070468,0.696710015581316,0.644337306610467,0.80673409849337,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0.38992817423824,0.898819408654221,0,0,0.948339504765408,0.228497025219458,1.1270773567308,0.203651327845314,0.193952487167626,0.350679099451593,0.442655759869801,0.590440591918409,0.470996183524124,0.123397163921801,0.296452627087149,0.333690211432188,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0.568474235311454,0.651859905768103,0.509235257325564,0.234690248288502,0.502518772325447,0.476087281772027,0.195133647857799,0.472905432318573,0.664394068946325,0.797273843287435,0.983179888294428,0.345369963731791,0.723245292907558,0,0,0,0.275936746304732,0.963303539926752,0.937693492737625,0.163934945376675,1.00988370881749,3.47059041357882,1.95219372148319,3.01592756825919,2.86762557543062,3.34198011123591,3.96307143104365,1.61924280669958,2.33804686329049,2.37172666767914,0.963963949265421,0.567760340833074,0,0.977321756121456,0.329940245945071,1.32745138339963,0.242780636154981,0,0.377210159511796,0.590603785761546,1.84461088766356,1.03371317267288,0,0.356497378384721,0.316036757935816,0,0,0,1.98067203434441,0.776152102696527,0.857348140126369,0.354680467284547,0.713475270408282,1.31639216481697,0,0.23467170806371,0.21183207086382,0.661585194164886,0.32977250588296,0.807322133479528,0.301564624640779,0.119372344003136,0,0.291480836629851,1.29797711407357,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0.228778173206523,0.679913719975421,0.839708713941948,0.414599921413271,0,0.474503990371703,0.813277868507395,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.826534557253359,1.04702376793612,0.648074866458964,0,2.81846469342095,0.897099276263873,0.165458490457098,0.777804753376191,0.387479470433193,1.01373675294467,0.117357238645754,0.2604087696879,0.629156066554265,2.41584120826006,2.59227005632079,0.632022241256357,0.202725215290164,0.308132871494482,0.389762468933385,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.706765149637033,0.304827226619999,0.403304740547362,0.38983152295901,0.481059208201647,0.233753804363138,0,0.221985953374065,0,0,0.772758376128762,0,0.183151624267265,0,0,2.82375921308533,5.52390283808612,2.29158205375759,1.54667864109319,4.11049511862385,3.0215755895588,2.02506750069542,2.2516060161211,4.07828168085784,2.07104124700728,1.24544817101012,0.798049746802062,1.36586884603307,1.70174701947806,0.628839487883947,1.47074806760011,0.888986911206461,0.824140228955577,1.28367683836726,1.26348605881899,0.50695859978048,0.943131706930381,1.03005658216871,1.08842759088278,1.37845125493472,1.90517476513229,1.62238056322798,0.38581844092741,1.64834360321323,0.294397840268795,1.02860775715625,1.4198064492747,2.14592570952589,1.0174249164263,1.12931256498397,1.09998990259179,2.0122077016005,0.526139422875686,1.49384525230448,1.12228454331548,1.54225523561426,1.28055827088233,2.45538625901814,1.54936841185966,0.578719832943424,1.99848462350357,1.40358965067245,2.14871054048298,0.956441660344217,0.441182838239031,0.695603506861264 | |phase1_expression=1.44133962394315,0.348975407639361,0,0.30246421130683,0,0,0.934450562382103,0,0.281577444303333,0,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0.202475267389826,0,0.630924330716475,0.685572168028694,0.42438965179803,1.27564935226605,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0,0.202753862439029,0.183546752161682,0.782391344348039,3.2703773457067,1.97717564461025,2.13872888981712,1.67983705950435,2.87505128729943,0.671130424230945,0,0,0,0.286533439938757,0,1.82084814773638,2.11596391708813,1.90149421051854,0.338844532069132,0,0,0,0,1.49800055259202,1.92109152660777,14.5165457231869,13.9056116481641,14.7227472945967,1.71390590642282,1.10434270475807,5.87955836231779,6.70918297127655,7.35375029288017,0,0.766124028511126,0,2.2420668914133,2.56165402086747,0,0.837548997004143,0,1.22238598221448,2.65165726926301,2.42031857358475,2.23679334990361,0.151452386666368,0.151143120213571,0.869593466105033,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0.421333260395256,0.170430322578058,0.519572009205738,0.70667914902068,0.985903938436763,0,0,0,0.432982082022428,0.253359865475099,0,0.45673551887624,0.517875767294343,0,0.520455980298408,0.608930956624282,0.691846491768175,0,0.470354828542819,0.251333182659351,0.247194967734374,0.433798070759735,0.884610551949874,1.61766849947409,0.220841518460394,2.42437626567611,1.86391761218122,2.34224637609238,5.65506108396329,0.255457055208591,0.718890747035522,1.79970819298022,1.77898317902291,0.599162557619291,2.28750301409313,3.5183218591602,1.56441888173049,3.06858548796397,0.41557608911912,1.29793010454206,0.712875546952214,0.497627882440372,0.252722758433675,1.05220927943237,1.17108398666433,2.29902104433473,1.98068342785884,2.10986744970001,4.28629944653366,5.12454881139399,5.34099829990454,1.03481348295606,0.215567992932842,0.945530400839096,0.527853372491847,0.876782929710299,0.556094498451196,1.74126083261083,0.823128545631774,0.199034266818493,1.40442637462647,1.80143534980301,0.852490498186778,0.621377317606506,0.469052119962192,0.540186184383045,0.473489471170421,0.393528463494808,0.154267112887378,0,0.268273401399619,0.233530684734339,0.822799249567402,0.492502392237286,0.56748166682099,0.292399974850665,0,0.134206418760372,2.10289948564127,9.77593817603202,0,0,0.426576501070468,0.696710015581316,0.644337306610467,0.80673409849337,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0.38992817423824,0.898819408654221,0,0,0.948339504765408,0.228497025219458,1.1270773567308,0.203651327845314,0.193952487167626,0.350679099451593,0.442655759869801,0.590440591918409,0.470996183524124,0.123397163921801,0.296452627087149,0.333690211432188,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0.568474235311454,0.651859905768103,0.509235257325564,0.234690248288502,0.502518772325447,0.476087281772027,0.195133647857799,0.472905432318573,0.664394068946325,0.797273843287435,0.983179888294428,0.345369963731791,0.723245292907558,0,0,0,0.275936746304732,0.963303539926752,0.937693492737625,0.163934945376675,1.00988370881749,3.47059041357882,1.95219372148319,3.01592756825919,2.86762557543062,3.34198011123591,3.96307143104365,1.61924280669958,2.33804686329049,2.37172666767914,0.963963949265421,0.567760340833074,0,0.977321756121456,0.329940245945071,1.32745138339963,0.242780636154981,0,0.377210159511796,0.590603785761546,1.84461088766356,1.03371317267288,0,0.356497378384721,0.316036757935816,0,0,0,1.98067203434441,0.776152102696527,0.857348140126369,0.354680467284547,0.713475270408282,1.31639216481697,0,0.23467170806371,0.21183207086382,0.661585194164886,0.32977250588296,0.807322133479528,0.301564624640779,0.119372344003136,0,0.291480836629851,1.29797711407357,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0.228778173206523,0.679913719975421,0.839708713941948,0.414599921413271,0,0.474503990371703,0.813277868507395,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.826534557253359,1.04702376793612,0.648074866458964,0,2.81846469342095,0.897099276263873,0.165458490457098,0.777804753376191,0.387479470433193,1.01373675294467,0.117357238645754,0.2604087696879,0.629156066554265,2.41584120826006,2.59227005632079,0.632022241256357,0.202725215290164,0.308132871494482,0.389762468933385,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.706765149637033,0.304827226619999,0.403304740547362,0.38983152295901,0.481059208201647,0.233753804363138,0,0.221985953374065,0,0,0.772758376128762,0,0.183151624267265,0,0,2.82375921308533,5.52390283808612,2.29158205375759,1.54667864109319,4.11049511862385,3.0215755895588,2.02506750069542,2.2516060161211,4.07828168085784,2.07104124700728,1.24544817101012,0.798049746802062,1.36586884603307,1.70174701947806,0.628839487883947,1.47074806760011,0.888986911206461,0.824140228955577,1.28367683836726,1.26348605881899,0.50695859978048,0.943131706930381,1.03005658216871,1.08842759088278,1.37845125493472,1.90517476513229,1.62238056322798,0.38581844092741,1.64834360321323,0.294397840268795,1.02860775715625,1.4198064492747,2.14592570952589,1.0174249164263,1.12931256498397,1.09998990259179,2.0122077016005,0.526139422875686,1.49384525230448,1.12228454331548,1.54225523561426,1.28055827088233,2.45538625901814,1.54936841185966,0.578719832943424,1.99848462350357,1.40358965067245,2.14871054048298,0.956441660344217,0.441182838239031,0.695603506861264 | ||
|short_description=p4@Zfp238 | |||
}} | }} |
Latest revision as of 21:22, 26 September 2015
Short description: | p4@Zfp238 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Zfp238_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 87bp_to_uc007dul.1_5end |
EntrezGene: | Zfp238 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.09e-18 | 43 |
ectodermal cell | 2.03e-17 | 44 |
neurectodermal cell | 2.03e-17 | 44 |
neuron | 9.19e-16 | 33 |
neuronal stem cell | 9.19e-16 | 33 |
neuroblast | 9.19e-16 | 33 |
electrically signaling cell | 9.19e-16 | 33 |
electrically responsive cell | 7.60e-12 | 39 |
electrically active cell | 7.60e-12 | 39 |
CNS neuron (sensu Vertebrata) | 9.18e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.18e-09 | 23 |
autonomic neuron | 2.12e-08 | 9 |
neuron of cerebral cortex | 7.86e-08 | 6 |
embryonic cell | 8.05e-07 | 70 |