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FFCP PHASE1:Mm9::chr7:53039056..53039102,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=381983
|EntrezGene=381983
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=E9QNZ5
|UniProt=E9QNZ5
|association_with_transcript=-5bp_to_ENSMUST00000118564_5end
|association_with_transcript=-5bp_to_ENSMUST00000118564_5end
|cluster_id=chr7:53039056..53039102,+
|description=CAGE_peak_3_at_Lmtk3_5end
|description=CAGE_peak_3_at_Lmtk3_5end
|id=chr7:53039056..53039102,+
|id=chr7:53039056..53039102,+
|ontology_enrichment_celltype=CL:0000117!1.21e-15!23;CL:0000337!1.21e-15!23;CL:0000540!1.61e-13!33;CL:0000047!1.61e-13!33;CL:0000031!1.61e-13!33;CL:0000404!1.61e-13!33;CL:0000393!6.38e-10!39;CL:0000211!6.38e-10!39;CL:0002319!1.09e-09!43;CL:0000221!1.15e-09!44;CL:0000133!1.15e-09!44;CL:0000055!5.92e-07!50
|ontology_enrichment_celltype=CL:0000117!1.21e-15!23;CL:0000337!1.21e-15!23;CL:0000540!1.61e-13!33;CL:0000047!1.61e-13!33;CL:0000031!1.61e-13!33;CL:0000404!1.61e-13!33;CL:0000393!6.38e-10!39;CL:0000211!6.38e-10!39;CL:0002319!1.09e-09!43;CL:0000221!1.15e-09!44;CL:0000133!1.15e-09!44;CL:0000055!5.92e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,7.05e-24,23;CL:0000337,7.05e-24,23;CL:0000540,1.84e-15,33;CL:0000047,1.84e-15,33;CL:0000031,1.84e-15,33;CL:0000404,1.84e-15,33;CL:0000393,6.74e-12,39;CL:0000211,6.74e-12,39;CL:0002319,4.19e-10,43;CL:0000221,1.04e-09,44;CL:0000133,1.04e-09,44;CL:0002609,5.54e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.27e-27!73;UBERON:0005743!2.27e-27!73;UBERON:0002346!1.78e-26!71;UBERON:0003075!1.78e-26!71;UBERON:0007284!1.78e-26!71;UBERON:0000073!2.00e-26!75;UBERON:0001016!2.00e-26!75;UBERON:0000033!2.91e-25!63;UBERON:0001049!3.42e-25!52;UBERON:0005068!3.42e-25!52;UBERON:0006241!3.42e-25!52;UBERON:0007135!3.42e-25!52;UBERON:0000955!3.66e-24!50;UBERON:0006238!3.66e-24!50;UBERON:0004121!8.38e-24!102;UBERON:0000924!8.38e-24!102;UBERON:0006601!8.38e-24!102;UBERON:0002616!2.59e-23!49;UBERON:0003056!7.62e-23!49;UBERON:0002020!4.19e-21!34;UBERON:0003080!3.34e-20!40;UBERON:0002780!1.34e-19!39;UBERON:0001890!1.34e-19!39;UBERON:0006240!1.34e-19!39;UBERON:0002791!4.47e-18!29;UBERON:0003528!4.47e-18!29;UBERON:0001893!4.47e-18!29;UBERON:0007811!1.35e-17!86;UBERON:0000153!2.13e-16!94;UBERON:0000956!9.21e-13!21;UBERON:0001869!9.21e-13!21;UBERON:0000203!9.21e-13!21;UBERON:0002619!6.08e-10!17;UBERON:0002021!1.14e-08!10;UBERON:0000411!1.14e-08!10;UBERON:0001950!1.14e-08!10
|ontology_enrichment_uberon=UBERON:0001017!2.27e-27!73;UBERON:0005743!2.27e-27!73;UBERON:0002346!1.78e-26!71;UBERON:0003075!1.78e-26!71;UBERON:0007284!1.78e-26!71;UBERON:0000073!2.00e-26!75;UBERON:0001016!2.00e-26!75;UBERON:0000033!2.91e-25!63;UBERON:0001049!3.42e-25!52;UBERON:0005068!3.42e-25!52;UBERON:0006241!3.42e-25!52;UBERON:0007135!3.42e-25!52;UBERON:0000955!3.66e-24!50;UBERON:0006238!3.66e-24!50;UBERON:0004121!8.38e-24!102;UBERON:0000924!8.38e-24!102;UBERON:0006601!8.38e-24!102;UBERON:0002616!2.59e-23!49;UBERON:0003056!7.62e-23!49;UBERON:0002020!4.19e-21!34;UBERON:0003080!3.34e-20!40;UBERON:0002780!1.34e-19!39;UBERON:0001890!1.34e-19!39;UBERON:0006240!1.34e-19!39;UBERON:0002791!4.47e-18!29;UBERON:0003528!4.47e-18!29;UBERON:0001893!4.47e-18!29;UBERON:0007811!1.35e-17!86;UBERON:0000153!2.13e-16!94;UBERON:0000956!9.21e-13!21;UBERON:0001869!9.21e-13!21;UBERON:0000203!9.21e-13!21;UBERON:0002619!6.08e-10!17;UBERON:0002021!1.14e-08!10;UBERON:0000411!1.14e-08!10;UBERON:0001950!1.14e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.25e-33,34;UBERON:0000073,1.33e-33,54;UBERON:0001049,1.47e-31,52;UBERON:0005068,1.47e-31,52;UBERON:0006241,1.47e-31,52;UBERON:0007135,1.47e-31,52;UBERON:0002346,9.21e-31,64;UBERON:0003075,9.21e-31,64;UBERON:0007284,9.21e-31,64;UBERON:0001017,7.60e-30,73;UBERON:0003528,8.41e-29,29;UBERON:0002791,8.41e-29,29;UBERON:0001893,8.41e-29,29;UBERON:0001016,1.29e-28,75;UBERON:0000955,2.32e-27,47;UBERON:0006238,2.32e-27,47;UBERON:0002616,3.98e-26,46;UBERON:0010371,4.46e-25,73;UBERON:0003080,1.17e-24,40;UBERON:0003056,1.52e-24,49;UBERON:0004121,2.88e-24,95;UBERON:0000924,2.88e-24,95;UBERON:0006601,2.88e-24,95;UBERON:0002780,9.71e-24,39;UBERON:0001890,9.71e-24,39;UBERON:0006240,9.71e-24,39;UBERON:0000956,2.55e-20,21;UBERON:0001869,2.55e-20,21;UBERON:0000203,2.55e-20,21;UBERON:0010314,7.97e-17,92;UBERON:0002619,8.24e-16,17;UBERON:0002021,8.09e-13,10;UBERON:0000411,8.09e-13,10;UBERON:0001950,8.09e-13,10;UBERON:0002420,1.77e-09,8;UBERON:0007245,1.77e-09,8;UBERON:0010009,1.77e-09,8;UBERON:0010011,1.77e-09,8;UBERON:0000454,1.77e-09,8;UBERON:0000025,2.12e-07,114;UBERON:0003076,2.91e-07,12;UBERON:0003057,2.91e-07,12;UBERON:0000369,3.46e-07,5;UBERON:0002435,3.46e-07,5;UBERON:0000204,3.46e-07,5;UBERON:0010082,3.46e-07,5
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,9.71119012126069,10.0508286061686,9.50747105259269,0,0,0,0,0,0,0.384218305321555,7.8804105354443,11.2054928815303,9.04397333810943,2.28520787523043,2.42955395046775,7.96190194897201,8.05101956553185,13.7882817991503,2.20231761998777,2.42605942361857,3.5329502648936,10.9465618816061,11.2529801630964,6.25096044668112,2.23346399201105,3.37657566019008,2.90316670775939,7.66034322231536,5.12538050876771,6.71038004971082,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0.251333182659351,0,0,0,0,0,0.484875253135222,0,4.09893115816166,4.1889341362691,0,0,0,0,3.59497534571574,9.60751265919116,13.3193613239636,12.3415267336516,8.95004100656157,4.77912502486988,6.65189178577806,0.101839363850316,0,0,0.631325567659422,0.260240885925407,0.459804208866946,0.540186389416048,2.56198190320716,1.56483948048054,1.0249097622788,1.49922759295566,1.03481348295606,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0.696504333044333,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,13.6688466566683,11.216602749342,0,0,0,0.232236671860439,0.128867461322093,0,0.444756087689741,0,0,0,0,0,0.19496408711912,0,0,0,0,0.456994050438915,0,0,0,0.210407459670956,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,1.9266070798535,1.40654023910644,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0.404810701674894,0.584511715822624,0,12.8528526568723,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0.590603785761546,0.307435147943927,0,0,0,0,0,0,1.36175842301515,0.36012218806262,0.776152102696527,0,0.532020700926821,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0.161464426695906,0,0.238744688006273,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0.276399947608848,0,0.316335993581135,0.813277868507395,0.324016022465404,0,0,0.404593039154462,0,0,0,0,0.56369293868419,0.299033092087958,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0.483168241652012,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,10.7302850097243,9.66682996665071,9.73922372846974,9.10821866421544,14.3867329151835,12.8416962556249,9.45031500324528,10.3573876741571,8.60970577069989,9.83744592328458,0.31136204275253,0.399024873401031,0.853668028770671,1.94485373654635,0.209613162627982,1.65459157605013,2.22246727801615,2.26638562962784,1.92551525755089,1.01078884705519,1.2673964994512,3.01802146217722,1.87283014939765,2.11283002936069,1.78049953762401,0.952587382566147,2.20180219295225,1.92909220463705,1.23625770240992,1.61918812147837,2.40008476669791,1.77475806159337,1.43061713968393,2.61623549938191,1.78807822789128,1.52306294205018,2.0122077016005,2.36762740294059,0.950628796921032,4.48913817326191,1.30498519936592,1.77308068276014,0.818462086339379,1.23949472948773,1.92906610981141,4.99621155875892,1.40358965067245,1.07435527024149,0.57386499620653,0,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,9.71119012126069,10.0508286061686,9.50747105259269,0,0,0,0,0,0,0.384218305321555,7.8804105354443,11.2054928815303,9.04397333810943,2.28520787523043,2.42955395046775,7.96190194897201,8.05101956553185,13.7882817991503,2.20231761998777,2.42605942361857,3.5329502648936,10.9465618816061,11.2529801630964,6.25096044668112,2.23346399201105,3.37657566019008,2.90316670775939,7.66034322231536,5.12538050876771,6.71038004971082,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0.251333182659351,0,0,0,0,0,0.484875253135222,0,4.09893115816166,4.1889341362691,0,0,0,0,3.59497534571574,9.60751265919116,13.3193613239636,12.3415267336516,8.95004100656157,4.77912502486988,6.65189178577806,0.101839363850316,0,0,0.631325567659422,0.260240885925407,0.459804208866946,0.540186389416048,2.56198190320716,1.56483948048054,1.0249097622788,1.49922759295566,1.03481348295606,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0.696504333044333,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,13.6688466566683,11.216602749342,0,0,0,0.232236671860439,0.128867461322093,0,0.444756087689741,0,0,0,0,0,0.19496408711912,0,0,0,0,0.456994050438915,0,0,0,0.210407459670956,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,1.9266070798535,1.40654023910644,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0.404810701674894,0.584511715822624,0,12.8528526568723,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0.590603785761546,0.307435147943927,0,0,0,0,0,0,1.36175842301515,0.36012218806262,0.776152102696527,0,0.532020700926821,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0.161464426695906,0,0.238744688006273,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0.276399947608848,0,0.316335993581135,0.813277868507395,0.324016022465404,0,0,0.404593039154462,0,0,0,0,0.56369293868419,0.299033092087958,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0.483168241652012,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,10.7302850097243,9.66682996665071,9.73922372846974,9.10821866421544,14.3867329151835,12.8416962556249,9.45031500324528,10.3573876741571,8.60970577069989,9.83744592328458,0.31136204275253,0.399024873401031,0.853668028770671,1.94485373654635,0.209613162627982,1.65459157605013,2.22246727801615,2.26638562962784,1.92551525755089,1.01078884705519,1.2673964994512,3.01802146217722,1.87283014939765,2.11283002936069,1.78049953762401,0.952587382566147,2.20180219295225,1.92909220463705,1.23625770240992,1.61918812147837,2.40008476669791,1.77475806159337,1.43061713968393,2.61623549938191,1.78807822789128,1.52306294205018,2.0122077016005,2.36762740294059,0.950628796921032,4.48913817326191,1.30498519936592,1.77308068276014,0.818462086339379,1.23949472948773,1.92906610981141,4.99621155875892,1.40358965067245,1.07435527024149,0.57386499620653,0,0.231867835620421
|short_description=p3@Lmtk3
|short_description=p3@Lmtk3
}}
}}

Latest revision as of 21:53, 26 September 2015

Short description:p3@Lmtk3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lmtk3_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -5bp_to_ENSMUST00000118564_5end
EntrezGene:Lmtk3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lmtk3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.71
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.88
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F113.32
cortex, adult.CNhs10473.12-14D512.34
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B26.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E813.67
hippocampus, neonate N00.CNhs11228.627-43G111.22
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter1.25e-3334
regional part of nervous system1.33e-3354
neural tube1.47e-3152
neural rod1.47e-3152
future spinal cord1.47e-3152
neural keel1.47e-3152
neurectoderm9.21e-3164
neural plate9.21e-3164
presumptive neural plate9.21e-3164
central nervous system7.60e-3073
brain grey matter8.41e-2929
regional part of telencephalon8.41e-2929
telencephalon8.41e-2929
nervous system1.29e-2875
brain2.32e-2747
future brain2.32e-2747
regional part of brain3.98e-2646
ecto-epithelium4.46e-2573
anterior neural tube1.17e-2440
pre-chordal neural plate1.52e-2449
ectoderm-derived structure2.88e-2495
ectoderm2.88e-2495
presumptive ectoderm2.88e-2495
regional part of forebrain9.71e-2439
forebrain9.71e-2439
future forebrain9.71e-2439
cerebral cortex2.55e-2021
cerebral hemisphere2.55e-2021
pallium2.55e-2021
structure with developmental contribution from neural crest7.97e-1792
regional part of cerebral cortex8.24e-1617
occipital lobe8.09e-1310
visual cortex8.09e-1310
neocortex8.09e-1310
basal ganglion1.77e-098
nuclear complex of neuraxis1.77e-098
aggregate regional part of brain1.77e-098
collection of basal ganglia1.77e-098
cerebral subcortex1.77e-098
tube2.12e-07114
posterior neural tube2.91e-0712
chordal neural plate2.91e-0712
corpus striatum3.46e-075
striatum3.46e-075
ventral part of telencephalon3.46e-075
future corpus striatum3.46e-075
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