FFCP PHASE1:Mm9::chr12:85393125..85393134,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=171281 | |EntrezGene=171281 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1302 | |MCL_coexpression_id=1302 | ||
|TSSclassifier=NA | |||
|UniProt=Q9QYR7,D3Z4I9,Q53YL1 | |UniProt=Q9QYR7,D3Z4I9,Q53YL1 | ||
|association_with_transcript=24bp_to_ENSMUST00000021653,ENSMUST00000085209,NM_134246,uc007oef.1,uc007oeg.1_5end | |association_with_transcript=24bp_to_ENSMUST00000021653,ENSMUST00000085209,NM_134246,uc007oef.1,uc007oeg.1_5end | ||
|cluster_id=chr12:85393125..85393134,+ | |||
|description=CAGE_peak_3_at_Acot3_5end | |description=CAGE_peak_3_at_Acot3_5end | ||
|id=chr12:85393125..85393134,+ | |id=chr12:85393125..85393134,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!7.72e-15!14;UBERON:0003918!7.72e-15!14;UBERON:0005095!7.72e-15!14;UBERON:0007687!7.72e-15!14;UBERON:0006554!6.95e-13!16;UBERON:0001008!4.44e-12!17;UBERON:0005172!5.30e-11!49;UBERON:0005173!5.30e-11!49;UBERON:0002417!5.30e-11!49;UBERON:0000916!5.30e-11!49;UBERON:0000489!1.27e-09!21;UBERON:0009569!1.23e-07!66 | |ontology_enrichment_uberon=UBERON:0002113!7.72e-15!14;UBERON:0003918!7.72e-15!14;UBERON:0005095!7.72e-15!14;UBERON:0007687!7.72e-15!14;UBERON:0006554!6.95e-13!16;UBERON:0001008!4.44e-12!17;UBERON:0005172!5.30e-11!49;UBERON:0005173!5.30e-11!49;UBERON:0002417!5.30e-11!49;UBERON:0000916!5.30e-11!49;UBERON:0000489!1.27e-09!21;UBERON:0009569!1.23e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.97e-22,14;UBERON:0003918,1.97e-22,14;UBERON:0011143,1.97e-22,14;UBERON:0005095,1.97e-22,14;UBERON:0007687,1.97e-22,14;UBERON:0006554,1.51e-17,18;UBERON:0001008,1.20e-16,19;UBERON:0000489,4.24e-15,21;UBERON:0005172,1.11e-12,49;UBERON:0005173,1.11e-12,49;UBERON:0002417,1.11e-12,49;UBERON:0000916,1.11e-12,49;UBERON:0003104,3.20e-10,61;UBERON:0009142,3.20e-10,61;UBERON:0009569,1.86e-09,66;UBERON:0005177,6.48e-08,79;UBERON:0003103,1.59e-07,43;UBERON:0002100,5.94e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,1.16371492300575,0.631222379012867,1.64414996523069,2.06654207171443,1.09899109488962,1.1105744752962,0,0,0,0,0,0,0,0,2.7562988551756,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,1.16371492300575,0.631222379012867,1.64414996523069,2.06654207171443,1.09899109488962,1.1105744752962,0,0,0,0,0,0,0,0,2.7562988551756,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p3@Acot3 | |short_description=p3@Acot3 | ||
}} | }} |
Latest revision as of 22:05, 26 September 2015
Short description: | p3@Acot3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Acot3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1302 |
Association with transcript: | 24bp_to_ENSMUST00000021653, ENSMUST00000085209, NM_134246, uc007oef.1, uc007oeg.1_5end |
EntrezGene: | Acot3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.97e-22 | 14 |
kidney mesenchyme | 1.97e-22 | 14 |
upper urinary tract | 1.97e-22 | 14 |
kidney rudiment | 1.97e-22 | 14 |
kidney field | 1.97e-22 | 14 |
urinary system structure | 1.51e-17 | 18 |
renal system | 1.20e-16 | 19 |
cavitated compound organ | 4.24e-15 | 21 |
abdomen element | 1.11e-12 | 49 |
abdominal segment element | 1.11e-12 | 49 |
abdominal segment of trunk | 1.11e-12 | 49 |
abdomen | 1.11e-12 | 49 |
mesenchyme | 3.20e-10 | 61 |
entire embryonic mesenchyme | 3.20e-10 | 61 |
subdivision of trunk | 1.86e-09 | 66 |
trunk region element | 6.48e-08 | 79 |
compound organ | 1.59e-07 | 43 |
trunk | 5.94e-07 | 90 |