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FFCP PHASE1:Mm9::chr11:118063794..118063817,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19157
|EntrezGene=19157
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-10bp_to_uc007mos.1_5end
|association_with_transcript=-10bp_to_uc007mos.1_5end
|cluster_id=chr11:118063794..118063817,-
|description=CAGE_peak_8_at_Cyth1_5end
|description=CAGE_peak_8_at_Cyth1_5end
|id=chr11:118063794..118063817,-
|id=chr11:118063794..118063817,-
|ontology_enrichment_celltype=CL:0000540!6.69e-12!33;CL:0000047!6.69e-12!33;CL:0000031!6.69e-12!33;CL:0000404!6.69e-12!33;CL:0000221!1.33e-09!44;CL:0000133!1.33e-09!44;CL:0002319!3.78e-09!43;CL:0000117!7.25e-09!23;CL:0000337!7.25e-09!23;CL:0000393!2.38e-08!39;CL:0000211!2.38e-08!39
|ontology_enrichment_celltype=CL:0000540!6.69e-12!33;CL:0000047!6.69e-12!33;CL:0000031!6.69e-12!33;CL:0000404!6.69e-12!33;CL:0000221!1.33e-09!44;CL:0000133!1.33e-09!44;CL:0002319!3.78e-09!43;CL:0000117!7.25e-09!23;CL:0000337!7.25e-09!23;CL:0000393!2.38e-08!39;CL:0000211!2.38e-08!39
|ontology_enrichment_celltype_v019_2=CL:0002610,2.63e-08,3;CL:0002614,5.06e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.10e-23!73;UBERON:0005743!1.10e-23!73;UBERON:0000073!5.57e-23!75;UBERON:0001016!5.57e-23!75;UBERON:0004121!2.96e-20!102;UBERON:0000924!2.96e-20!102;UBERON:0006601!2.96e-20!102;UBERON:0002346!1.24e-18!71;UBERON:0003075!1.24e-18!71;UBERON:0007284!1.24e-18!71;UBERON:0000033!3.84e-18!63;UBERON:0001049!3.65e-17!52;UBERON:0005068!3.65e-17!52;UBERON:0006241!3.65e-17!52;UBERON:0007135!3.65e-17!52;UBERON:0000955!7.31e-17!50;UBERON:0006238!7.31e-17!50;UBERON:0002616!4.08e-16!49;UBERON:0002020!6.48e-14!34;UBERON:0004111!2.21e-12!122;UBERON:0003056!6.91e-12!49;UBERON:0003080!1.59e-11!40;UBERON:0002791!1.67e-11!29;UBERON:0003528!1.67e-11!29;UBERON:0001893!1.67e-11!29;UBERON:0000025!2.20e-11!114;UBERON:0002780!8.23e-11!39;UBERON:0001890!8.23e-11!39;UBERON:0006240!8.23e-11!39;UBERON:0007811!9.66e-10!86;UBERON:0002021!6.84e-08!10;UBERON:0000411!6.84e-08!10;UBERON:0001950!6.84e-08!10;UBERON:0000956!1.20e-07!21;UBERON:0001869!1.20e-07!21;UBERON:0000203!1.20e-07!21;UBERON:0000153!2.13e-07!94;UBERON:0003076!9.87e-07!12;UBERON:0003057!9.87e-07!12
|ontology_enrichment_uberon=UBERON:0001017!1.10e-23!73;UBERON:0005743!1.10e-23!73;UBERON:0000073!5.57e-23!75;UBERON:0001016!5.57e-23!75;UBERON:0004121!2.96e-20!102;UBERON:0000924!2.96e-20!102;UBERON:0006601!2.96e-20!102;UBERON:0002346!1.24e-18!71;UBERON:0003075!1.24e-18!71;UBERON:0007284!1.24e-18!71;UBERON:0000033!3.84e-18!63;UBERON:0001049!3.65e-17!52;UBERON:0005068!3.65e-17!52;UBERON:0006241!3.65e-17!52;UBERON:0007135!3.65e-17!52;UBERON:0000955!7.31e-17!50;UBERON:0006238!7.31e-17!50;UBERON:0002616!4.08e-16!49;UBERON:0002020!6.48e-14!34;UBERON:0004111!2.21e-12!122;UBERON:0003056!6.91e-12!49;UBERON:0003080!1.59e-11!40;UBERON:0002791!1.67e-11!29;UBERON:0003528!1.67e-11!29;UBERON:0001893!1.67e-11!29;UBERON:0000025!2.20e-11!114;UBERON:0002780!8.23e-11!39;UBERON:0001890!8.23e-11!39;UBERON:0006240!8.23e-11!39;UBERON:0007811!9.66e-10!86;UBERON:0002021!6.84e-08!10;UBERON:0000411!6.84e-08!10;UBERON:0001950!6.84e-08!10;UBERON:0000956!1.20e-07!21;UBERON:0001869!1.20e-07!21;UBERON:0000203!1.20e-07!21;UBERON:0000153!2.13e-07!94;UBERON:0003076!9.87e-07!12;UBERON:0003057!9.87e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.83e-28,54;UBERON:0001017,1.08e-26,73;UBERON:0001016,8.70e-26,75;UBERON:0001049,4.92e-25,52;UBERON:0005068,4.92e-25,52;UBERON:0006241,4.92e-25,52;UBERON:0007135,4.92e-25,52;UBERON:0002346,2.22e-24,64;UBERON:0003075,2.22e-24,64;UBERON:0007284,2.22e-24,64;UBERON:0000955,1.00e-23,47;UBERON:0006238,1.00e-23,47;UBERON:0002616,4.93e-22,46;UBERON:0004121,1.00e-21,95;UBERON:0000924,1.00e-21,95;UBERON:0006601,1.00e-21,95;UBERON:0010371,1.53e-20,73;UBERON:0010314,2.26e-20,92;UBERON:0002020,1.76e-17,34;UBERON:0003080,1.29e-16,40;UBERON:0003528,1.59e-16,29;UBERON:0002791,1.59e-16,29;UBERON:0001893,1.59e-16,29;UBERON:0002021,3.28e-16,10;UBERON:0000411,3.28e-16,10;UBERON:0001950,3.28e-16,10;UBERON:0002780,5.07e-15,39;UBERON:0001890,5.07e-15,39;UBERON:0006240,5.07e-15,39;UBERON:0003056,3.49e-14,49;UBERON:0002619,1.63e-13,17;UBERON:0000956,1.17e-12,21;UBERON:0001869,1.17e-12,21;UBERON:0000203,1.17e-12,21;UBERON:0000025,9.42e-11,114;UBERON:0004111,1.51e-10,122;UBERON:0002950,2.11e-10,4;UBERON:0001891,2.11e-10,4;UBERON:0009616,2.11e-10,4;UBERON:0010286,2.11e-10,4;UBERON:0003076,3.02e-09,12;UBERON:0003057,3.02e-09,12;UBERON:0004684,2.63e-08,3;UBERON:0002275,2.63e-08,3;UBERON:0002038,5.06e-08,3;UBERON:0009663,5.06e-08,3;UBERON:0009661,5.06e-08,3;UBERON:0000125,5.06e-08,3;UBERON:0002308,5.06e-08,3;UBERON:0004733,4.68e-07,6;UBERON:0004732,4.68e-07,6;UBERON:0002028,4.68e-07,6;UBERON:0007277,4.68e-07,6
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.55994568650145,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.540023753326763,0.841299845405528,1.71390590642282,1.76694832761291,0,0.191690942036473,0,8.8092704799511,5.49055553766307,9.06278546211836,0.791317726381163,0.274462930807229,0.52091337055676,8.09630697104005,6.19038871034848,4.88954392885792,0.294628585473668,0.569486723196412,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0.593768556259299,0,0,0.461230994512117,0,0.117588707135705,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,8.19786231632332,4.81727425670947,0,0,0,0,9.8861822007183,9.15001205637253,0.125654352112864,3.12883776346098,4.85859368927628,8.3115217823824,6.32740925964255,0.101839363850316,0.248813941220186,0,0.631325567659422,0,0,0,0.452114453507145,0.340182495756639,0.2562274405697,0.281105173679186,1.03481348295606,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.930135779001631,1.07309360559848,0.350296027101508,0.329119699826961,0.985004784474571,0.972825714550269,2.19299981137998,1.09775057645525,0.805238512562231,6.72927835405207,1.44066457330998,0,0,0.213288250535234,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0,1.1270773567308,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.325929952884052,0,0.938760993154008,0.670025029767263,0.476087281772027,0,0.472905432318573,0.664394068946325,0.159454768657487,0,0.345369963731791,0,0,0,0,0,11.2385412991454,9.61135830056066,0,0.504941854408746,1.57754109708128,1.17131623288992,0.861693590931196,0.477937595905104,0.891194696329576,0.283076530788832,0,0.292255857911312,0.395287777946524,7.06906896127976,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,11.4963687246516,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,1.58711268530648,0,0.0897138566094757,0,0.386379188064381,0,0.36630324853453,0.428736758158132,0,1.12950368523413,1.38097570952153,3.43737308063638,1.03111909406213,4.7955776383945,0.755393897389701,3.37511250115903,2.70192721934532,1.81256963593682,4.65984280576638,0,0,0,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0,0,0,0,0.0936415074698824,0.384150914429216,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0.376437521661322,0.423073039458382,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.882365676478062,0.927471342481686
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.55994568650145,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.540023753326763,0.841299845405528,1.71390590642282,1.76694832761291,0,0.191690942036473,0,8.8092704799511,5.49055553766307,9.06278546211836,0.791317726381163,0.274462930807229,0.52091337055676,8.09630697104005,6.19038871034848,4.88954392885792,0.294628585473668,0.569486723196412,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0.593768556259299,0,0,0.461230994512117,0,0.117588707135705,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,8.19786231632332,4.81727425670947,0,0,0,0,9.8861822007183,9.15001205637253,0.125654352112864,3.12883776346098,4.85859368927628,8.3115217823824,6.32740925964255,0.101839363850316,0.248813941220186,0,0.631325567659422,0,0,0,0.452114453507145,0.340182495756639,0.2562274405697,0.281105173679186,1.03481348295606,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.930135779001631,1.07309360559848,0.350296027101508,0.329119699826961,0.985004784474571,0.972825714550269,2.19299981137998,1.09775057645525,0.805238512562231,6.72927835405207,1.44066457330998,0,0,0.213288250535234,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0,1.1270773567308,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.325929952884052,0,0.938760993154008,0.670025029767263,0.476087281772027,0,0.472905432318573,0.664394068946325,0.159454768657487,0,0.345369963731791,0,0,0,0,0,11.2385412991454,9.61135830056066,0,0.504941854408746,1.57754109708128,1.17131623288992,0.861693590931196,0.477937595905104,0.891194696329576,0.283076530788832,0,0.292255857911312,0.395287777946524,7.06906896127976,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,11.4963687246516,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,1.58711268530648,0,0.0897138566094757,0,0.386379188064381,0,0.36630324853453,0.428736758158132,0,1.12950368523413,1.38097570952153,3.43737308063638,1.03111909406213,4.7955776383945,0.755393897389701,3.37511250115903,2.70192721934532,1.81256963593682,4.65984280576638,0,0,0,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0,0,0,0,0.0936415074698824,0.384150914429216,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0.376437521661322,0.423073039458382,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.882365676478062,0.927471342481686
|short_description=p8@Cyth1
|short_description=p8@Cyth1
}}
}}

Latest revision as of 01:31, 27 September 2015

Short description:p8@Cyth1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Cyth1_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: -10bp_to_uc007mos.1_5end
EntrezGene:Cyth1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Cyth1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.20
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.89
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.24
medulla oblongata, neonate N30.CNhs11200.1396-42A39.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C911.50
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron2.63e-083
neuron of the substantia nigra5.06e-083

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.83e-2854
central nervous system1.08e-2673
nervous system8.70e-2675
neural tube4.92e-2552
neural rod4.92e-2552
future spinal cord4.92e-2552
neural keel4.92e-2552
neurectoderm2.22e-2464
neural plate2.22e-2464
presumptive neural plate2.22e-2464
brain1.00e-2347
future brain1.00e-2347
regional part of brain4.93e-2246
ectoderm-derived structure1.00e-2195
ectoderm1.00e-2195
presumptive ectoderm1.00e-2195
ecto-epithelium1.53e-2073
structure with developmental contribution from neural crest2.26e-2092
gray matter1.76e-1734
anterior neural tube1.29e-1640
brain grey matter1.59e-1629
regional part of telencephalon1.59e-1629
telencephalon1.59e-1629
occipital lobe3.28e-1610
visual cortex3.28e-1610
neocortex3.28e-1610
regional part of forebrain5.07e-1539
forebrain5.07e-1539
future forebrain5.07e-1539
pre-chordal neural plate3.49e-1449
regional part of cerebral cortex1.63e-1317
cerebral cortex1.17e-1221
cerebral hemisphere1.17e-1221
pallium1.17e-1221
tube9.42e-11114
anatomical conduit1.51e-10122
regional part of midbrain2.11e-104
midbrain2.11e-104
presumptive midbrain2.11e-104
midbrain neural tube2.11e-104
posterior neural tube3.02e-0912
chordal neural plate3.02e-0912
raphe nuclei2.63e-083
reticular formation2.63e-083
substantia nigra5.06e-083
telencephalic nucleus5.06e-083
midbrain nucleus5.06e-083
neural nucleus5.06e-083
nucleus of brain5.06e-083
segmental subdivision of hindbrain4.68e-076
segmental subdivision of nervous system4.68e-076
hindbrain4.68e-076
presumptive hindbrain4.68e-076
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