FFCP PHASE1:Mm9::chr11:119254374..119254397,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:119254374..119254397,+
|short_description=p1@Rnf213
|description=CAGE_peak_1_at_Rnf213_5end
|association_with_transcript=-16bp_to_ENSMUST00000131035_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=672511 | |EntrezGene=672511 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1279 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q555 | |UniProt=E9Q555 | ||
|association_with_transcript=-16bp_to_ENSMUST00000131035_5end | |||
|cluster_id=chr11:119254374..119254397,+ | |||
|description=CAGE_peak_1_at_Rnf213_5end | |||
|id=chr11:119254374..119254397,+ | |||
|ontology_enrichment_celltype=CL:0002031!6.72e-08!25;CL:0002320!1.02e-07!46;CL:0000134!1.02e-07!46;CL:0000988!3.67e-07!32;CL:0002032!3.67e-07!32;CL:0000037!3.67e-07!32;CL:0000566!3.67e-07!32;CL:0000837!3.67e-07!32;CL:0000219!4.91e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,6.65e-08,25;CL:0002320,1.14e-07,46;CL:0000134,1.14e-07,46;CL:0000988,3.64e-07,32;CL:0002032,3.64e-07,32;CL:0000037,3.64e-07,32;CL:0000837,3.64e-07,32;CL:0000219,4.98e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.13e-13!70;UBERON:0004119!3.67e-13!130;UBERON:0000925!3.67e-13!130;UBERON:0006595!3.67e-13!130;UBERON:0001007!7.61e-13!128;UBERON:0001555!7.61e-13!128;UBERON:0007026!7.61e-13!128;UBERON:0004921!8.57e-13!126;UBERON:0004185!8.57e-13!126;UBERON:0000926!4.21e-10!193;UBERON:0004120!4.21e-10!193;UBERON:0006603!4.21e-10!193;UBERON:0002193!9.27e-10!48;UBERON:0002390!2.43e-09!45;UBERON:0003061!2.43e-09!45;UBERON:0005057!2.40e-08!51;UBERON:0005911!7.17e-08!69;UBERON:0002384!1.02e-07!46;UBERON:0000490!2.19e-07!66;UBERON:0003929!4.19e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.88e-13,118;UBERON:0000925,1.88e-13,118;UBERON:0006595,1.88e-13,118;UBERON:0001007,3.82e-13,116;UBERON:0001555,3.82e-13,116;UBERON:0007026,3.82e-13,116;UBERON:0004921,4.12e-13,114;UBERON:0002193,8.24e-10,48;UBERON:0002405,8.24e-10,48;UBERON:0002390,2.16e-09,45;UBERON:0003061,2.16e-09,45;UBERON:0005911,6.55e-08,69;UBERON:0002384,1.14e-07,46;UBERON:0000490,2.01e-07,66;UBERON:0000160,2.20e-07,31;UBERON:0000926,2.57e-07,120;UBERON:0004120,2.57e-07,120;UBERON:0006603,2.57e-07,120;UBERON:0005409,2.63e-07,47;UBERON:0003929,3.82e-07,55 | |||
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| ||
|short_description=p1@Rnf213 | |||
}} | }} |
Latest revision as of 02:16, 27 September 2015
Short description: | p1@Rnf213 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rnf213_5end |
Coexpression cluster: | MCL_coexpression_mm9:1279 |
Association with transcript: | -16bp_to_ENSMUST00000131035_5end |
EntrezGene: | Rnf213 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 6.65e-08 | 25 |
connective tissue cell | 1.14e-07 | 46 |
mesenchymal cell | 1.14e-07 | 46 |
hematopoietic cell | 3.64e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.64e-07 | 32 |
hematopoietic stem cell | 3.64e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.64e-07 | 32 |
motile cell | 4.98e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.88e-13 | 118 |
endoderm | 1.88e-13 | 118 |
presumptive endoderm | 1.88e-13 | 118 |
digestive system | 3.82e-13 | 116 |
digestive tract | 3.82e-13 | 116 |
primitive gut | 3.82e-13 | 116 |
subdivision of digestive tract | 4.12e-13 | 114 |
hemolymphoid system | 8.24e-10 | 48 |
immune system | 8.24e-10 | 48 |
hematopoietic system | 2.16e-09 | 45 |
blood island | 2.16e-09 | 45 |
endo-epithelium | 6.55e-08 | 69 |
connective tissue | 1.14e-07 | 46 |
unilaminar epithelium | 2.01e-07 | 66 |
intestine | 2.20e-07 | 31 |
mesoderm | 2.57e-07 | 120 |
mesoderm-derived structure | 2.57e-07 | 120 |
presumptive mesoderm | 2.57e-07 | 120 |
gastrointestinal system | 2.63e-07 | 47 |
gut epithelium | 3.82e-07 | 55 |