FFCP PHASE1:Mm9::chr2:91023098..91023109,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=228355|HGNC=|MCL_coexpression_id=1|UniProt=A2AGR0|association_with_transcript=-52bp_to_ENSMUST00000099723_5end|description=CAGE_peak_5_at_Madd_5end|id=chr2:91023098..91023109,-|ontology_enrichment_celltype=CL:0000117!3.64e-13!23;CL:0000337!3.64e-13!23;CL:0000540!2.24e-09!33;CL:0000047!2.24e-09!33;CL:0000031!2.24e-09!33;CL:0000404!2.24e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.70e-27,23;CL:0000337,6.70e-27,23;CL:0000540,3.34e-18,33;CL:0000047,3.34e-18,33;CL:0000031,3.34e-18,33;CL:0000404,3.34e-18,33;CL:0000393,1.37e-15,39;CL:0000211,1.37e-15,39;CL:0002319,2.24e-12,43;CL:0000221,6.06e-12,44;CL:0000133,6.06e-12,44;CL:0002609,8.10e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.35e-23!52;UBERON:0005068!5.35e-23!52;UBERON:0006241!5.35e-23!52;UBERON:0007135!5.35e-23!52;UBERON:0002346!9.42e-23!71;UBERON:0003075!9.42e-23!71;UBERON:0007284!9.42e-23!71;UBERON:0000033!2.46e-22!63;UBERON:0000955!2.93e-22!50;UBERON:0006238!2.93e-22!50;UBERON:0002616!1.02e-21!49;UBERON:0001017!7.25e-21!73;UBERON:0005743!7.25e-21!73;UBERON:0003056!9.65e-20!49;UBERON:0000073!1.61e-19!75;UBERON:0001016!1.61e-19!75;UBERON:0007811!4.66e-19!86;UBERON:0004121!1.35e-18!102;UBERON:0000924!1.35e-18!102;UBERON:0006601!1.35e-18!102;UBERON:0003080!8.12e-18!40;UBERON:0002020!1.55e-17!34;UBERON:0002780!3.53e-17!39;UBERON:0001890!3.53e-17!39;UBERON:0006240!3.53e-17!39;UBERON:0000153!2.77e-15!94;UBERON:0002791!6.78e-15!29;UBERON:0003528!6.78e-15!29;UBERON:0001893!6.78e-15!29;UBERON:0000956!3.68e-10!21;UBERON:0001869!3.68e-10!21;UBERON:0000203!3.68e-10!21;UBERON:0002619!2.61e-08!17;UBERON:0000064!7.43e-08!99;UBERON:0002021!3.08e-07!10;UBERON:0000411!3.08e-07!10;UBERON:0001950!3.08e-07!10;UBERON:0000475!6.45e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.44e-48,54;UBERON:0001049,6.15e-45,52;UBERON:0005068,6.15e-45,52;UBERON:0006241,6.15e-45,52;UBERON:0007135,6.15e-45,52;UBERON:0001017,4.95e-43,73;UBERON:0001016,1.68e-41,75;UBERON:0002346,2.29e-41,64;UBERON:0003075,2.29e-41,64;UBERON:0007284,2.29e-41,64;UBERON:0000955,9.12e-39,47;UBERON:0006238,9.12e-39,47;UBERON:0002616,1.28e-37,46;UBERON:0002020,1.26e-36,34;UBERON:0004121,1.44e-35,95;UBERON:0000924,1.44e-35,95;UBERON:0006601,1.44e-35,95;UBERON:0010371,1.38e-34,73;UBERON:0003080,3.14e-34,40;UBERON:0003056,3.46e-33,49;UBERON:0002780,7.48e-33,39;UBERON:0001890,7.48e-33,39;UBERON:0006240,7.48e-33,39;UBERON:0003528,7.96e-31,29;UBERON:0002791,7.96e-31,29;UBERON:0001893,7.96e-31,29;UBERON:0010314,7.90e-26,92;UBERON:0000956,1.91e-20,21;UBERON:0001869,1.91e-20,21;UBERON:0000203,1.91e-20,21;UBERON:0002619,2.09e-16,17;UBERON:0000025,1.91e-14,114;UBERON:0002021,5.88e-14,10;UBERON:0000411,5.88e-14,10;UBERON:0001950,5.88e-14,10;UBERON:0004111,1.08e-12,122;UBERON:0002420,1.89e-11,8;UBERON:0007245,1.89e-11,8;UBERON:0010009,1.89e-11,8;UBERON:0010011,1.89e-11,8;UBERON:0000454,1.89e-11,8;UBERON:0003076,1.99e-10,12;UBERON:0003057,1.99e-10,12;UBERON:0011216,3.35e-09,194;UBERON:0000369,3.85e-08,5;UBERON:0002435,3.85e-08,5;UBERON:0000204,3.85e-08,5;UBERON:0010082,3.85e-08,5;UBERON:0000483,4.67e-08,174;UBERON:0002240,7.41e-08,6;UBERON:0005174,7.41e-08,6;UBERON:0001137,7.41e-08,6;UBERON:0000119,8.01e-08,176;UBERON:0001948,8.98e-07,5;UBERON:0002315,8.98e-07,5|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0,0,0.33575854382378,0.233612640595526,1.42035655785734,0.703943610758334,0.936258105287974,0.34243593645101,0.717949430958028,0.171200729931206,1.22388563386596,0,0,0,0.473193248037357,0.274228867211478,0,1.7008658030214,0.397163804803541,0,0.47997726838022,0,0,0.430761996159075,0.215471232685889,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0.782391344348039,0,0.439372365468944,0,0,0,0,0,0.336093799142464,0,0,1.03134418455488,2.83243045203437,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,1.76272340924412,2.02508907497536,1.05162480675691,1.99955689082663,2.20868540951614,1.10241719293459,1.62937300731002,1.83843757322004,5.50579404996943,4.08599481872601,3.07213066512487,5.14356522147756,3.84248103130121,3.12548022334056,3.35019598801657,1.12552522006336,3.36156145108982,1.47314292736834,1.56608848879013,3.91438836233131,0.075726193333184,0,0.579728977403356,0,0,0.539703191637817,0,0.448026887097336,0.280888840263504,0.170430322578058,0,0,0.422530259330042,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.5709193985953,0,0.445326417194474,0,0.304465478312141,0.230615497256059,0.301445281105245,0.587943535678524,0.251333182659351,0.247194967734374,0,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,3.22058876712702,7.54008144528438,0.510914110417183,0,0,0,3.2953940669061,4.11750542536764,2.01046963380583,3.12883776346098,3.83573185995496,2.28566849015516,3.24482526135515,0.101839363850316,0.124406970610093,0.252722758433675,0.420883711772948,0.260240885925407,0.459804208866946,0.540186389416048,1.05493372485001,1.29269348387523,0.768682321709099,1.03071897015702,3.3631438196072,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0,4.41608891984667,2.57261530948211,0,0,0,0.464473343720877,0,0.201683524623343,0.667134131534611,0,1.42358718463353,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0,0.350679099451593,0.189709611372772,0.295220295959204,0.156998727841375,0.493588655687202,0.296452627087149,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.486405680325106,0,0,0.372140947668503,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0.690739927463582,0.289298117163023,0,0,0,0,2.72936002979246,3.04750385139728,0,0.252470927204373,0,0.780877488593277,0.430846795465598,0,0.222798674082394,0.283076530788832,0,1.16902343164525,0.395287777946524,1.92792789853084,0.141940085208269,0,0,0.824850614862677,1.32745138339963,0.242780636154981,0,0.565815239267694,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0.948110273807448,2.10837217149998,0,2.7235168460303,0.18006109403131,0.258717367565509,1.07168517515796,0.532020700926821,1.78368817602071,0.493647061806363,2.13125464380219,0,0.42366414172764,0.882113592219848,0.49465875882444,0.161464426695906,0.361877549568935,0.477489376012546,0.328281799490123,1.1659233465194,2.22510362412612,0.341741761595705,0,0,0,0.410082683163076,0,0.169978429993855,0.279902904647316,0.690999869022119,0.954670618015114,0.316335993581135,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0.785267825952089,0.129614973291793,0,2.81846469342095,0,0,0.194451188344048,0.645799117388655,0,0,0.5208175393758,0.838874755405687,0.483168241652012,0.864090018773596,0.632022241256357,0,0.308132871494482,0,0.179026695667481,0.198681354781265,0.480781798079875,0.147689527174577,0.504832249740738,0.457240839929999,0.806609481094724,0.38983152295901,0.769694733122636,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0.36630324853453,0.214368379079066,0,2.25900737046827,4.60325236507177,2.29158205375759,3.43706364687375,1.37016503954128,4.5323633843382,5.40018000185445,1.35096360967266,4.07828168085784,3.62432218226274,0.103787347584177,0.399024873401031,0.512200817262403,0.486213434136588,1.46729213839588,0,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.576226371643824,0.114870937911227,0,0.927074607558844,0.38581844092741,0,0.588795680537589,0,0.354951612318675,0.715308569841963,0.581385666529314,0.376437521661322,0.592302255241736,0.548783918618318,0.526139422875686,0.679020569229309,0.561142271657738,0.474540072496697,0.394017929502254,0.409231043169689,0.77468420592983,0.385813221962283,1.74867404556562,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0|short_description=p5@Madd}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=228355 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=A2AGR0 | |||
|association_with_transcript=-52bp_to_ENSMUST00000099723_5end | |||
|cluster_id=chr2:91023098..91023109,- | |||
|description=CAGE_peak_5_at_Madd_5end | |||
|id=chr2:91023098..91023109,- | |||
|ontology_enrichment_celltype=CL:0000117!3.64e-13!23;CL:0000337!3.64e-13!23;CL:0000540!2.24e-09!33;CL:0000047!2.24e-09!33;CL:0000031!2.24e-09!33;CL:0000404!2.24e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.70e-27,23;CL:0000337,6.70e-27,23;CL:0000540,3.34e-18,33;CL:0000047,3.34e-18,33;CL:0000031,3.34e-18,33;CL:0000404,3.34e-18,33;CL:0000393,1.37e-15,39;CL:0000211,1.37e-15,39;CL:0002319,2.24e-12,43;CL:0000221,6.06e-12,44;CL:0000133,6.06e-12,44;CL:0002609,8.10e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.35e-23!52;UBERON:0005068!5.35e-23!52;UBERON:0006241!5.35e-23!52;UBERON:0007135!5.35e-23!52;UBERON:0002346!9.42e-23!71;UBERON:0003075!9.42e-23!71;UBERON:0007284!9.42e-23!71;UBERON:0000033!2.46e-22!63;UBERON:0000955!2.93e-22!50;UBERON:0006238!2.93e-22!50;UBERON:0002616!1.02e-21!49;UBERON:0001017!7.25e-21!73;UBERON:0005743!7.25e-21!73;UBERON:0003056!9.65e-20!49;UBERON:0000073!1.61e-19!75;UBERON:0001016!1.61e-19!75;UBERON:0007811!4.66e-19!86;UBERON:0004121!1.35e-18!102;UBERON:0000924!1.35e-18!102;UBERON:0006601!1.35e-18!102;UBERON:0003080!8.12e-18!40;UBERON:0002020!1.55e-17!34;UBERON:0002780!3.53e-17!39;UBERON:0001890!3.53e-17!39;UBERON:0006240!3.53e-17!39;UBERON:0000153!2.77e-15!94;UBERON:0002791!6.78e-15!29;UBERON:0003528!6.78e-15!29;UBERON:0001893!6.78e-15!29;UBERON:0000956!3.68e-10!21;UBERON:0001869!3.68e-10!21;UBERON:0000203!3.68e-10!21;UBERON:0002619!2.61e-08!17;UBERON:0000064!7.43e-08!99;UBERON:0002021!3.08e-07!10;UBERON:0000411!3.08e-07!10;UBERON:0001950!3.08e-07!10;UBERON:0000475!6.45e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.44e-48,54;UBERON:0001049,6.15e-45,52;UBERON:0005068,6.15e-45,52;UBERON:0006241,6.15e-45,52;UBERON:0007135,6.15e-45,52;UBERON:0001017,4.95e-43,73;UBERON:0001016,1.68e-41,75;UBERON:0002346,2.29e-41,64;UBERON:0003075,2.29e-41,64;UBERON:0007284,2.29e-41,64;UBERON:0000955,9.12e-39,47;UBERON:0006238,9.12e-39,47;UBERON:0002616,1.28e-37,46;UBERON:0002020,1.26e-36,34;UBERON:0004121,1.44e-35,95;UBERON:0000924,1.44e-35,95;UBERON:0006601,1.44e-35,95;UBERON:0010371,1.38e-34,73;UBERON:0003080,3.14e-34,40;UBERON:0003056,3.46e-33,49;UBERON:0002780,7.48e-33,39;UBERON:0001890,7.48e-33,39;UBERON:0006240,7.48e-33,39;UBERON:0003528,7.96e-31,29;UBERON:0002791,7.96e-31,29;UBERON:0001893,7.96e-31,29;UBERON:0010314,7.90e-26,92;UBERON:0000956,1.91e-20,21;UBERON:0001869,1.91e-20,21;UBERON:0000203,1.91e-20,21;UBERON:0002619,2.09e-16,17;UBERON:0000025,1.91e-14,114;UBERON:0002021,5.88e-14,10;UBERON:0000411,5.88e-14,10;UBERON:0001950,5.88e-14,10;UBERON:0004111,1.08e-12,122;UBERON:0002420,1.89e-11,8;UBERON:0007245,1.89e-11,8;UBERON:0010009,1.89e-11,8;UBERON:0010011,1.89e-11,8;UBERON:0000454,1.89e-11,8;UBERON:0003076,1.99e-10,12;UBERON:0003057,1.99e-10,12;UBERON:0011216,3.35e-09,194;UBERON:0000369,3.85e-08,5;UBERON:0002435,3.85e-08,5;UBERON:0000204,3.85e-08,5;UBERON:0010082,3.85e-08,5;UBERON:0000483,4.67e-08,174;UBERON:0002240,7.41e-08,6;UBERON:0005174,7.41e-08,6;UBERON:0001137,7.41e-08,6;UBERON:0000119,8.01e-08,176;UBERON:0001948,8.98e-07,5;UBERON:0002315,8.98e-07,5 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0,0,0.33575854382378,0.233612640595526,1.42035655785734,0.703943610758334,0.936258105287974,0.34243593645101,0.717949430958028,0.171200729931206,1.22388563386596,0,0,0,0.473193248037357,0.274228867211478,0,1.7008658030214,0.397163804803541,0,0.47997726838022,0,0,0.430761996159075,0.215471232685889,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0.782391344348039,0,0.439372365468944,0,0,0,0,0,0.336093799142464,0,0,1.03134418455488,2.83243045203437,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,1.76272340924412,2.02508907497536,1.05162480675691,1.99955689082663,2.20868540951614,1.10241719293459,1.62937300731002,1.83843757322004,5.50579404996943,4.08599481872601,3.07213066512487,5.14356522147756,3.84248103130121,3.12548022334056,3.35019598801657,1.12552522006336,3.36156145108982,1.47314292736834,1.56608848879013,3.91438836233131,0.075726193333184,0,0.579728977403356,0,0,0.539703191637817,0,0.448026887097336,0.280888840263504,0.170430322578058,0,0,0.422530259330042,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.5709193985953,0,0.445326417194474,0,0.304465478312141,0.230615497256059,0.301445281105245,0.587943535678524,0.251333182659351,0.247194967734374,0,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,3.22058876712702,7.54008144528438,0.510914110417183,0,0,0,3.2953940669061,4.11750542536764,2.01046963380583,3.12883776346098,3.83573185995496,2.28566849015516,3.24482526135515,0.101839363850316,0.124406970610093,0.252722758433675,0.420883711772948,0.260240885925407,0.459804208866946,0.540186389416048,1.05493372485001,1.29269348387523,0.768682321709099,1.03071897015702,3.3631438196072,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0,4.41608891984667,2.57261530948211,0,0,0,0.464473343720877,0,0.201683524623343,0.667134131534611,0,1.42358718463353,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0,0.350679099451593,0.189709611372772,0.295220295959204,0.156998727841375,0.493588655687202,0.296452627087149,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.486405680325106,0,0,0.372140947668503,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0.690739927463582,0.289298117163023,0,0,0,0,2.72936002979246,3.04750385139728,0,0.252470927204373,0,0.780877488593277,0.430846795465598,0,0.222798674082394,0.283076530788832,0,1.16902343164525,0.395287777946524,1.92792789853084,0.141940085208269,0,0,0.824850614862677,1.32745138339963,0.242780636154981,0,0.565815239267694,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0.948110273807448,2.10837217149998,0,2.7235168460303,0.18006109403131,0.258717367565509,1.07168517515796,0.532020700926821,1.78368817602071,0.493647061806363,2.13125464380219,0,0.42366414172764,0.882113592219848,0.49465875882444,0.161464426695906,0.361877549568935,0.477489376012546,0.328281799490123,1.1659233465194,2.22510362412612,0.341741761595705,0,0,0,0.410082683163076,0,0.169978429993855,0.279902904647316,0.690999869022119,0.954670618015114,0.316335993581135,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0.785267825952089,0.129614973291793,0,2.81846469342095,0,0,0.194451188344048,0.645799117388655,0,0,0.5208175393758,0.838874755405687,0.483168241652012,0.864090018773596,0.632022241256357,0,0.308132871494482,0,0.179026695667481,0.198681354781265,0.480781798079875,0.147689527174577,0.504832249740738,0.457240839929999,0.806609481094724,0.38983152295901,0.769694733122636,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0.36630324853453,0.214368379079066,0,2.25900737046827,4.60325236507177,2.29158205375759,3.43706364687375,1.37016503954128,4.5323633843382,5.40018000185445,1.35096360967266,4.07828168085784,3.62432218226274,0.103787347584177,0.399024873401031,0.512200817262403,0.486213434136588,1.46729213839588,0,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.576226371643824,0.114870937911227,0,0.927074607558844,0.38581844092741,0,0.588795680537589,0,0.354951612318675,0.715308569841963,0.581385666529314,0.376437521661322,0.592302255241736,0.548783918618318,0.526139422875686,0.679020569229309,0.561142271657738,0.474540072496697,0.394017929502254,0.409231043169689,0.77468420592983,0.385813221962283,1.74867404556562,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0 | |||
|short_description=p5@Madd | |||
}} |
Latest revision as of 02:48, 27 September 2015
Short description: | p5@Madd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Madd_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -52bp_to_ENSMUST00000099723_5end |
EntrezGene: | Madd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.70e-27 | 23 |
neuroblast (sensu Vertebrata) | 6.70e-27 | 23 |
neuron | 3.34e-18 | 33 |
neuronal stem cell | 3.34e-18 | 33 |
neuroblast | 3.34e-18 | 33 |
electrically signaling cell | 3.34e-18 | 33 |
electrically responsive cell | 1.37e-15 | 39 |
electrically active cell | 1.37e-15 | 39 |
neural cell | 2.24e-12 | 43 |
ectodermal cell | 6.06e-12 | 44 |
neurectodermal cell | 6.06e-12 | 44 |
neuron of cerebral cortex | 8.10e-07 | 6 |