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FFCP PHASE1:Mm9::chr13:115891962..115891986,-: Difference between revisions

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(Created page with "{{FFCP |id=chr13:115891962..115891986,- |short_description=p5@Itga1 |description=CAGE_peak_5_at_Itga1_5end |association_with_transcript=152bp_to_ENSMUST00000036276_5end |...")
 
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{{FFCP
{{FFCP
|id=chr13:115891962..115891986,-
|DHSsupport=NA
|short_description=p5@Itga1
|DPIdataset=NA
|description=CAGE_peak_5_at_Itga1_5end
|association_with_transcript=152bp_to_ENSMUST00000036276_5end
|EntrezGene=109700
|EntrezGene=109700
|HGNC=
|HGNC=
|MCL_coexpression_id=2819
|TSSclassifier=NA
|UniProt=Q3URV2
|UniProt=Q3URV2
|association_with_transcript=152bp_to_ENSMUST00000036276_5end
|cluster_id=chr13:115891962..115891986,-
|description=CAGE_peak_5_at_Itga1_5end
|id=chr13:115891962..115891986,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!2.35e-12!47;UBERON:0001007!3.69e-12!128;UBERON:0001555!3.69e-12!128;UBERON:0007026!3.69e-12!128;UBERON:0004119!3.97e-12!130;UBERON:0000925!3.97e-12!130;UBERON:0006595!3.97e-12!130;UBERON:0004921!4.84e-12!126;UBERON:0004185!4.84e-12!126;UBERON:0005409!1.64e-10!59;UBERON:0005177!7.85e-10!85;UBERON:0009569!2.01e-09!66;UBERON:0002100!4.61e-09!98;UBERON:0000466!8.12e-09!79;UBERON:0000481!8.71e-08!230;UBERON:0000160!1.82e-07!43;UBERON:0004535!2.19e-07!23;UBERON:0001009!2.19e-07!23;UBERON:0005153!2.37e-07!17;UBERON:0003104!3.20e-07!131;UBERON:0009142!3.20e-07!131;UBERON:0004872!5.81e-07!33;UBERON:0002365!7.05e-07!25;UBERON:0002330!7.05e-07!25
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.21e-12,47;UBERON:0001007,4.53e-11,116;UBERON:0001555,4.53e-11,116;UBERON:0007026,4.53e-11,116;UBERON:0002100,4.85e-11,90;UBERON:0004119,4.97e-11,118;UBERON:0000925,4.97e-11,118;UBERON:0006595,4.97e-11,118;UBERON:0005177,5.02e-11,79;UBERON:0004921,5.84e-11,114;UBERON:0005409,1.42e-09,47;UBERON:0009569,2.58e-09,66;UBERON:0004535,7.47e-08,23;UBERON:0001009,7.47e-08,23;UBERON:0004872,2.14e-07,33;UBERON:0005153,2.25e-07,17;UBERON:0005157,3.23e-07,20;UBERON:0007100,7.30e-07,18;UBERON:0000948,7.30e-07,18;UBERON:0005498,7.30e-07,18;UBERON:0004140,7.30e-07,18;UBERON:0009881,7.30e-07,18;UBERON:0004141,7.30e-07,18;UBERON:0003084,7.30e-07,18;UBERON:0007005,7.30e-07,18;UBERON:0004139,7.30e-07,18;UBERON:0004291,7.30e-07,18;UBERON:0002365,9.03e-07,25;UBERON:0002330,9.03e-07,25
|phase1_expression=0.80074423552397,2.44282785347553,0.909998478779072,1.20985684522732,2.00358291978539,4.8684988854448,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0.0992909512008853,0,1.91990907352088,2.52350209173887,1.72269589234506,2.15380998079537,1.72376986148711,2.66032787238923,3.2763916868791,0.665191531965914,0,0,0,5.48818077527422,2.82598897109437,5.10423390655923,0,0,0,0,0,0,3.9028013572429,3.64956952390252,1.28482726513177,2.34717403304412,0,1.75748946187577,2.3331587888914,0.139986421625363,0,0,0,0,2.57259436035947,6.5902691185914,2.06268836910977,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.510749352340751,0.46081959976873,0,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.15279824777681,0.294628585473668,0.569486723196412,0.559198337475902,0.151452386666368,0.302286240427142,4.92769630792852,7.74381489283248,2.03991400112325,8.09554787456726,6.49776417447669,3.58421509677868,1.82577746171277,5.96506129023202,2.85764605063156,2.82671659608272,0.14084341977668,10.2661181931454,5.09610479413291,0,0,0,0,3.4255163915718,2.07150306917737,1.03909497345377,0.346970653532272,0.913396434936424,1.38369298353635,0.150722640552623,1.29347577849275,1.50799909595611,1.73036477414062,9.9773556274739,0.884610551949874,3.39710384889559,1.54589062922275,1.93950101254089,11.1835056730873,0.878342391034642,0.628340120440365,4.59822699375465,0.11981512450592,0,0.254140454146129,0.299581278809645,0.915001205637253,0.125654352112864,0.869121600961382,0,0,0.973447578406546,3.05518091550949,3.73220911830279,1.51633655060205,2.10441855886474,0,0,0.180062129805349,1.50704817835715,1.29269348387523,1.2811372028485,1.03071897015702,1.29351685369508,0,0,0.527853372491847,0,0.834141747676794,1.74126083261083,2.88094990971121,0.199034266818493,0,0,0.284163499395593,2.27838349789052,3.51789089971644,2.52086886045421,3.55117103377815,7.08351234290654,5.86215028972037,9.99895962426754,10.7309360559848,11.3262382096154,10.0381508447223,7.05920095540109,3.97237166774693,8.18719929581861,6.36695334344047,5.90508242545636,0.210289948564127,0.411618449517138,1.65209391491899,3.17340679996253,0,1.16118335930219,3.8660238396628,5.04208811558356,5.33707305227689,5.89699440948933,8.0669940462567,6.42325923423642,9.0480675168097,8.95304124185179,11.5028811400281,5.39291645192533,12.3198688428576,12.5459002150251,0.189667900953082,1.02823661348756,3.38123207019241,2.24016460629846,2.71533482034676,5.04977903210294,9.61195364288711,9.59465961867414,14.1298855057237,9.25478729413504,6.52195779591728,0.500535317148282,1.76903095601883,0.899448449539415,1.62288097110802,2.65294875727659,4.58326533206556,5.75392274901621,3.40483976227574,6.58947391651396,12.9391385874619,10.7920874823866,10.2972432127805,10.6083128737787,8.7904732625737,5.78932225636041,11.0851914099963,0.947457058852424,2.44447464663039,3.90413697282933,5.39787571063555,4.35516269348721,4.76087281772027,5.65887578787617,11.6650006638581,15.723992965063,18.018388858296,15.0754249538479,18.3046080777849,14.1756077409881,0,0,3.93411418415229,4.41498794087572,0.321101179975584,0.937693492737625,0,2.01976741763498,2.83957397474631,1.56175497718655,3.23135096599198,1.19484398976276,0.668396022247182,1.41538265394416,2.02405350837447,2.63030272120181,1.18586333383957,0.642642632843614,3.54850213020672,1.24645922567079,1.62886959353576,7.09371528781903,6.63725691699814,0.242780636154981,0.906970670894253,0.377210159511796,1.47650946440386,3.3817866273832,6.71913562237375,3.27180356529755,3.56497378384721,6.63677191665214,6.32511651449993,9.28219889233682,0,0,0.388076051348264,0,0.532020700926821,0.178368817602071,0.822745103010605,0.913394847343798,1.40803024838226,1.90648863777438,6.83638033970382,0.49465875882444,0.484393280087717,1.80938774784468,0.954978752025092,0.820704498725306,8.45294426226567,0.927126510052548,1.02522528478712,1.857481811669,2.77791791054568,3.01389531207506,2.46049609897845,1.60144721244566,0,0,0,3.81868247206045,0,5.08298667817122,5.40026704109006,8.57262013659322,10.0446779323242,20.3645163041079,20.663363931334,17.799404054914,14.5168770086808,3.72803587852155,0,0,0.496375471371293,1.16670713006429,1.03327858782185,0.675824501963113,0.704143431874524,3.25510962109875,2.09718688851422,1.20792060413003,1.44015003128933,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0.360586348559907,0.590758108698309,0.504832249740738,0.15241361331,0,0.38983152295901,0.384847366561318,0.467507608726276,1.13365191807606,0,0,0,45.5927441915969,27.5893238913238,6.41030684935428,2.14368379079066,10.0314420807073,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0,0,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,3.11145418922261,3.7086310303001,3.85103051510178,3.03236654116557,2.28131369901216,3.39527414494937,3.183811253976,3.00918216302886,3.33125719942557,2.38146845641537,2.0859178670074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|phase1_expression=0.80074423552397,2.44282785347553,0.909998478779072,1.20985684522732,2.00358291978539,4.8684988854448,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0.0992909512008853,0,1.91990907352088,2.52350209173887,1.72269589234506,2.15380998079537,1.72376986148711,2.66032787238923,3.2763916868791,0.665191531965914,0,0,0,5.48818077527422,2.82598897109437,5.10423390655923,0,0,0,0,0,0,3.9028013572429,3.64956952390252,1.28482726513177,2.34717403304412,0,1.75748946187577,2.3331587888914,0.139986421625363,0,0,0,0,2.57259436035947,6.5902691185914,2.06268836910977,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.510749352340751,0.46081959976873,0,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.15279824777681,0.294628585473668,0.569486723196412,0.559198337475902,0.151452386666368,0.302286240427142,4.92769630792852,7.74381489283248,2.03991400112325,8.09554787456726,6.49776417447669,3.58421509677868,1.82577746171277,5.96506129023202,2.85764605063156,2.82671659608272,0.14084341977668,10.2661181931454,5.09610479413291,0,0,0,0,3.4255163915718,2.07150306917737,1.03909497345377,0.346970653532272,0.913396434936424,1.38369298353635,0.150722640552623,1.29347577849275,1.50799909595611,1.73036477414062,9.9773556274739,0.884610551949874,3.39710384889559,1.54589062922275,1.93950101254089,11.1835056730873,0.878342391034642,0.628340120440365,4.59822699375465,0.11981512450592,0,0.254140454146129,0.299581278809645,0.915001205637253,0.125654352112864,0.869121600961382,0,0,0.973447578406546,3.05518091550949,3.73220911830279,1.51633655060205,2.10441855886474,0,0,0.180062129805349,1.50704817835715,1.29269348387523,1.2811372028485,1.03071897015702,1.29351685369508,0,0,0.527853372491847,0,0.834141747676794,1.74126083261083,2.88094990971121,0.199034266818493,0,0,0.284163499395593,2.27838349789052,3.51789089971644,2.52086886045421,3.55117103377815,7.08351234290654,5.86215028972037,9.99895962426754,10.7309360559848,11.3262382096154,10.0381508447223,7.05920095540109,3.97237166774693,8.18719929581861,6.36695334344047,5.90508242545636,0.210289948564127,0.411618449517138,1.65209391491899,3.17340679996253,0,1.16118335930219,3.8660238396628,5.04208811558356,5.33707305227689,5.89699440948933,8.0669940462567,6.42325923423642,9.0480675168097,8.95304124185179,11.5028811400281,5.39291645192533,12.3198688428576,12.5459002150251,0.189667900953082,1.02823661348756,3.38123207019241,2.24016460629846,2.71533482034676,5.04977903210294,9.61195364288711,9.59465961867414,14.1298855057237,9.25478729413504,6.52195779591728,0.500535317148282,1.76903095601883,0.899448449539415,1.62288097110802,2.65294875727659,4.58326533206556,5.75392274901621,3.40483976227574,6.58947391651396,12.9391385874619,10.7920874823866,10.2972432127805,10.6083128737787,8.7904732625737,5.78932225636041,11.0851914099963,0.947457058852424,2.44447464663039,3.90413697282933,5.39787571063555,4.35516269348721,4.76087281772027,5.65887578787617,11.6650006638581,15.723992965063,18.018388858296,15.0754249538479,18.3046080777849,14.1756077409881,0,0,3.93411418415229,4.41498794087572,0.321101179975584,0.937693492737625,0,2.01976741763498,2.83957397474631,1.56175497718655,3.23135096599198,1.19484398976276,0.668396022247182,1.41538265394416,2.02405350837447,2.63030272120181,1.18586333383957,0.642642632843614,3.54850213020672,1.24645922567079,1.62886959353576,7.09371528781903,6.63725691699814,0.242780636154981,0.906970670894253,0.377210159511796,1.47650946440386,3.3817866273832,6.71913562237375,3.27180356529755,3.56497378384721,6.63677191665214,6.32511651449993,9.28219889233682,0,0,0.388076051348264,0,0.532020700926821,0.178368817602071,0.822745103010605,0.913394847343798,1.40803024838226,1.90648863777438,6.83638033970382,0.49465875882444,0.484393280087717,1.80938774784468,0.954978752025092,0.820704498725306,8.45294426226567,0.927126510052548,1.02522528478712,1.857481811669,2.77791791054568,3.01389531207506,2.46049609897845,1.60144721244566,0,0,0,3.81868247206045,0,5.08298667817122,5.40026704109006,8.57262013659322,10.0446779323242,20.3645163041079,20.663363931334,17.799404054914,14.5168770086808,3.72803587852155,0,0,0.496375471371293,1.16670713006429,1.03327858782185,0.675824501963113,0.704143431874524,3.25510962109875,2.09718688851422,1.20792060413003,1.44015003128933,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0.360586348559907,0.590758108698309,0.504832249740738,0.15241361331,0,0.38983152295901,0.384847366561318,0.467507608726276,1.13365191807606,0,0,0,45.5927441915969,27.5893238913238,6.41030684935428,2.14368379079066,10.0314420807073,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0,0,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,3.11145418922261,3.7086310303001,3.85103051510178,3.03236654116557,2.28131369901216,3.39527414494937,3.183811253976,3.00918216302886,3.33125719942557,2.38146845641537,2.0859178670074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|short_description=p5@Itga1
}}
}}

Latest revision as of 03:37, 27 September 2015

Short description:p5@Itga1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Itga1_5end
Coexpression cluster:MCL_coexpression_mm9:2819
Association with transcript: 152bp_to_ENSMUST00000036276_5end
EntrezGene:Itga1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Itga1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H19.98
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.73
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C87.08
heart, embryo E16.CNhs11021.457-17C65.86
heart, embryo E17.CNhs11025.479-18E510.00
heart, embryo E18.CNhs11030.1283-20G310.73
heart, neonate N00.CNhs11213.639-21E311.33
heart, neonate N03.CNhs11221.1349-25I210.04
heart, neonate N10.CNhs11118.749-24G17.06
heart, neonate N16.CNhs11209.782-15G13.97
heart, neonate N20.CNhs11127.821-26I68.19
heart, neonate N25.CNhs11196.1351-25D36.37
heart, neonate N30.CNhs11202.1390-42D25.91
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D83.87
intestine, embryo E16.CNhs10585.463-22H45.04
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F75.90
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E96.42
intestine, neonate N06.CNhs11102.688-20B89.05
intestine, neonate N07.CNhs11095.720-20F28.95
intestine, neonate N10.CNhs11098.755-23A511.50
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E312.32
intestine, neonate N30.CNhs11131.1384-42G112.55
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G75.05
kidney, neonate N10.CNhs11206.758-6D59.61
kidney, neonate N20.CNhs11113.832-19I19.59
kidney, neonate N25.CNhs11122.1353-25F314.13
kidney, neonate N30.CNhs11203.1385-42H19.25
liver, adult pregnant day01.CNhs10466.508-5B26.52
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F43.40
liver, neonate N03.CNhs11123.1345-25G26.59
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H210.79
liver, neonate N10.CNhs11115.751-24B910.30
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H18.79
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B111.09
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A64.36
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E511.67
lung, neonate N07.CNhs11111.715-19A315.72
lung, neonate N10.CNhs11219.750-23E618.02
lung, neonate N20.CNhs11109.822-18A415.08
lung, neonate N25.CNhs11119.1359-25C718.30
lung, neonate N30.CNhs11133.1394-42H214.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I73.55
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G67.09
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G96.72
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B66.64
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F86.84
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I18.45
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D45.40
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C610.04
stomach, neonate N03.CNhs11193.1340-24B820.36
stomach, neonate N07.CNhs11210.718-18A920.66
stomach, neonate N25.CNhs11104.1355-25E417.80
stomach, neonate N30.CNhs11134.1386-42I114.52
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E445.59
uterus, adult pregnant day19.CNhs10497.590-15F527.59
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube1.21e-1247
digestive system4.53e-11116
digestive tract4.53e-11116
primitive gut4.53e-11116
trunk4.85e-1190
endoderm-derived structure4.97e-11118
endoderm4.97e-11118
presumptive endoderm4.97e-11118
trunk region element5.02e-1179
subdivision of digestive tract5.84e-11114
gastrointestinal system1.42e-0947
subdivision of trunk2.58e-0966
cardiovascular system7.47e-0823
circulatory system7.47e-0823
splanchnic layer of lateral plate mesoderm2.14e-0733
epithelial bud2.25e-0717
epithelial fold3.23e-0720
primary circulatory organ7.30e-0718
heart7.30e-0718
primitive heart tube7.30e-0718
primary heart field7.30e-0718
anterior lateral plate mesoderm7.30e-0718
heart tube7.30e-0718
heart primordium7.30e-0718
cardiac mesoderm7.30e-0718
cardiogenic plate7.30e-0718
heart rudiment7.30e-0718
exocrine gland9.03e-0725
exocrine system9.03e-0725
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