FFCP PHASE1:Mm9::chr1:42752036..42752049,-: Difference between revisions
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|id=chr1:42752036..42752049,-
|short_description=p7@2610017I09Rik
|description=CAGE_peak_7_at_2610017I09Rik_5end
|association_with_transcript=-366bp_to_NR_027826,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66297 | |EntrezGene=66297 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-366bp_to_NR_027826,uc007auu.1,uc007auv.1_5end | |||
|cluster_id=chr1:42752036..42752049,- | |||
|description=CAGE_peak_7_at_2610017I09Rik_5end | |||
|id=chr1:42752036..42752049,- | |||
|ontology_enrichment_celltype=CL:0000117!9.59e-16!23;CL:0000337!9.59e-16!23;CL:0000540!1.20e-14!33;CL:0000047!1.20e-14!33;CL:0000031!1.20e-14!33;CL:0000404!1.20e-14!33;CL:0000221!2.91e-14!44;CL:0000133!2.91e-14!44;CL:0002319!2.11e-13!43;CL:0000393!2.59e-11!39;CL:0000211!2.59e-11!39;CL:0000055!1.97e-10!50;CL:0002609!8.27e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,2.53e-27,3;CL:0000117,4.16e-24,23;CL:0000337,4.16e-24,23;CL:0000540,4.73e-21,33;CL:0000047,4.73e-21,33;CL:0000031,4.73e-21,33;CL:0000404,4.73e-21,33;CL:0000393,9.28e-18,39;CL:0000211,9.28e-18,39;CL:0002319,4.53e-16,43;CL:0000221,1.07e-15,44;CL:0000133,1.07e-15,44;CL:0002609,8.25e-14,6;CL:0002608,7.25e-13,3;CL:0002613,1.42e-12,3;CL:0002374,1.03e-09,1;CL:0000202,1.03e-09,1;CL:0000199,1.03e-09,1;CL:0000855,1.03e-09,1;CL:0000589,1.03e-09,1;CL:0002321,1.09e-09,70;CL:0000723,2.56e-07,91;CL:0000048,2.56e-07,91;CL:0000034,7.94e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.38e-24!73;UBERON:0005743!9.38e-24!73;UBERON:0000073!9.47e-23!75;UBERON:0001016!9.47e-23!75;UBERON:0001049!9.67e-19!52;UBERON:0005068!9.67e-19!52;UBERON:0006241!9.67e-19!52;UBERON:0007135!9.67e-19!52;UBERON:0002616!6.12e-16!49;UBERON:0002020!1.18e-15!34;UBERON:0000955!1.97e-15!50;UBERON:0006238!1.97e-15!50;UBERON:0004121!6.79e-15!102;UBERON:0000924!6.79e-15!102;UBERON:0006601!6.79e-15!102;UBERON:0002346!9.50e-15!71;UBERON:0003075!9.50e-15!71;UBERON:0007284!9.50e-15!71;UBERON:0000033!2.02e-13!63;UBERON:0003080!7.05e-13!40;UBERON:0002791!1.58e-12!29;UBERON:0003528!1.58e-12!29;UBERON:0001893!1.58e-12!29;UBERON:0002780!5.90e-12!39;UBERON:0001890!5.90e-12!39;UBERON:0006240!5.90e-12!39;UBERON:0003056!5.67e-10!49;UBERON:0000956!8.16e-10!21;UBERON:0001869!8.16e-10!21;UBERON:0000203!8.16e-10!21;UBERON:0007811!2.53e-07!86;UBERON:0000153!4.50e-07!94;UBERON:0003076!7.99e-07!12;UBERON:0003057!7.99e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.74e-16,5;UBERON:0002435,1.74e-16,5;UBERON:0000204,1.74e-16,5;UBERON:0010082,1.74e-16,5;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0003528,7.93e-11,29;UBERON:0002791,7.93e-11,29;UBERON:0001893,7.93e-11,29;UBERON:0002420,1.50e-10,8;UBERON:0007245,1.50e-10,8;UBERON:0010009,1.50e-10,8;UBERON:0010011,1.50e-10,8;UBERON:0000454,1.50e-10,8;UBERON:0002020,3.24e-09,34;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0002780,5.17e-08,39;UBERON:0001890,5.17e-08,39;UBERON:0006240,5.17e-08,39;UBERON:0003080,8.29e-08,40;UBERON:0002616,9.19e-07,46 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,3.70293685490423,5.07065122804943,0,0,0,0,0,0.299600110518405,0.768436610643109,0.518448061542388,0.675029691658453,1.26194976810829,0,0.662605622854841,4.16468717330844,1.43768206527355,0.919218786610021,0,0.255374676170375,0.307213066512487,1.58263545276233,1.28082701043374,0,0,0,0.15279824777681,0.294628585473668,0.711858403995515,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.748953197024114,0.457500602818626,4.02093926761166,0.347648640384553,0,0.41557608911912,0.162241263067758,0,0.124406970610093,0.505445516867349,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.316182685621286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.68741272937475,0.685082519770642,0,0,0,0,0,0.415149390336707,0,0.853668028770671,0.486213434136588,0.209613162627982,0.183843508450014,0.666740183404846,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.516919220600519,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.581385666529314,0.564656282491984,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0.191288332068843,0,0 | |phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,3.70293685490423,5.07065122804943,0,0,0,0,0,0.299600110518405,0.768436610643109,0.518448061542388,0.675029691658453,1.26194976810829,0,0.662605622854841,4.16468717330844,1.43768206527355,0.919218786610021,0,0.255374676170375,0.307213066512487,1.58263545276233,1.28082701043374,0,0,0,0.15279824777681,0.294628585473668,0.711858403995515,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.748953197024114,0.457500602818626,4.02093926761166,0.347648640384553,0,0.41557608911912,0.162241263067758,0,0.124406970610093,0.505445516867349,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.316182685621286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.68741272937475,0.685082519770642,0,0,0,0,0,0.415149390336707,0,0.853668028770671,0.486213434136588,0.209613162627982,0.183843508450014,0.666740183404846,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.516919220600519,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.581385666529314,0.564656282491984,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0.191288332068843,0,0 | ||
|short_description=p7@2610017I09Rik | |||
}} | }} |
Latest revision as of 03:48, 27 September 2015
Short description: | p7@2610017I09Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_2610017I09Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -366bp_to_NR_027826, uc007auu.1, uc007auv.1_5end |
EntrezGene: | 2610017I09Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 2.53e-27 | 3 |
CNS neuron (sensu Vertebrata) | 4.16e-24 | 23 |
neuroblast (sensu Vertebrata) | 4.16e-24 | 23 |
neuron | 4.73e-21 | 33 |
neuronal stem cell | 4.73e-21 | 33 |
neuroblast | 4.73e-21 | 33 |
electrically signaling cell | 4.73e-21 | 33 |
electrically responsive cell | 9.28e-18 | 39 |
electrically active cell | 9.28e-18 | 39 |
neural cell | 4.53e-16 | 43 |
ectodermal cell | 1.07e-15 | 44 |
neurectodermal cell | 1.07e-15 | 44 |
neuron of cerebral cortex | 8.25e-14 | 6 |
hippocampal neuron | 7.25e-13 | 3 |
striatum neuron | 1.42e-12 | 3 |
ear hair cell | 1.03e-09 | 1 |
auditory hair cell | 1.03e-09 | 1 |
mechanoreceptor cell | 1.03e-09 | 1 |
sensory hair cell | 1.03e-09 | 1 |
cochlear inner hair cell | 1.03e-09 | 1 |
embryonic cell | 1.09e-09 | 70 |
somatic stem cell | 2.56e-07 | 91 |
multi fate stem cell | 2.56e-07 | 91 |
stem cell | 7.94e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.74e-16 | 5 |
striatum | 1.74e-16 | 5 |
ventral part of telencephalon | 1.74e-16 | 5 |
future corpus striatum | 1.74e-16 | 5 |
central nervous system | 1.42e-11 | 73 |
nervous system | 2.99e-11 | 75 |
brain grey matter | 7.93e-11 | 29 |
regional part of telencephalon | 7.93e-11 | 29 |
telencephalon | 7.93e-11 | 29 |
basal ganglion | 1.50e-10 | 8 |
nuclear complex of neuraxis | 1.50e-10 | 8 |
aggregate regional part of brain | 1.50e-10 | 8 |
collection of basal ganglia | 1.50e-10 | 8 |
cerebral subcortex | 1.50e-10 | 8 |
gray matter | 3.24e-09 | 34 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
regional part of forebrain | 5.17e-08 | 39 |
forebrain | 5.17e-08 | 39 |
future forebrain | 5.17e-08 | 39 |
anterior neural tube | 8.29e-08 | 40 |
regional part of brain | 9.19e-07 | 46 |