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FFCP PHASE1:Mm9::chr6:39369941..39369957,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:39369941..39369957,-
|DHSsupport=NA
|short_description=p6@Mkrn1
|DPIdataset=NA
|description=CAGE_peak_6_at_Mkrn1_5end
|association_with_transcript=0bp_to_ENSMUST00000170431,uc009bls.1_5end
|EntrezGene=54484
|EntrezGene=54484
|HGNC=
|HGNC=
|MCL_coexpression_id=742
|TSSclassifier=NA
|UniProt=Q9DB86
|UniProt=Q9DB86
|association_with_transcript=0bp_to_ENSMUST00000170431,uc009bls.1_5end
|cluster_id=chr6:39369941..39369957,-
|description=CAGE_peak_6_at_Mkrn1_5end
|id=chr6:39369941..39369957,-
|ontology_enrichment_celltype=CL:0000117!1.03e-09!23;CL:0000337!1.03e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,7.82e-17,23;CL:0000337,7.82e-17,23;CL:0000540,3.15e-10,33;CL:0000047,3.15e-10,33;CL:0000031,3.15e-10,33;CL:0000404,3.15e-10,33;CL:0000393,6.14e-08,39;CL:0000211,6.14e-08,39;CL:0002319,8.71e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.72e-14!73;UBERON:0005743!7.72e-14!73;UBERON:0000073!2.09e-13!75;UBERON:0001016!2.09e-13!75;UBERON:0001049!2.30e-13!52;UBERON:0005068!2.30e-13!52;UBERON:0006241!2.30e-13!52;UBERON:0007135!2.30e-13!52;UBERON:0002020!1.77e-12!34;UBERON:0000033!2.13e-12!63;UBERON:0000955!6.94e-12!50;UBERON:0006238!6.94e-12!50;UBERON:0002346!1.35e-11!71;UBERON:0003075!1.35e-11!71;UBERON:0007284!1.35e-11!71;UBERON:0002616!1.97e-11!49;UBERON:0004121!1.69e-10!102;UBERON:0000924!1.69e-10!102;UBERON:0006601!1.69e-10!102;UBERON:0003056!6.41e-10!49;UBERON:0002791!2.90e-09!29;UBERON:0003528!2.90e-09!29;UBERON:0001893!2.90e-09!29;UBERON:0003080!1.17e-08!40;UBERON:0002780!3.97e-08!39;UBERON:0001890!3.97e-08!39;UBERON:0006240!3.97e-08!39;UBERON:0002021!9.53e-07!10;UBERON:0000411!9.53e-07!10;UBERON:0001950!9.53e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.90e-26,54;UBERON:0001049,8.77e-24,52;UBERON:0005068,8.77e-24,52;UBERON:0006241,8.77e-24,52;UBERON:0007135,8.77e-24,52;UBERON:0001017,9.07e-24,73;UBERON:0001016,7.82e-23,75;UBERON:0002020,2.39e-20,34;UBERON:0002346,1.07e-18,64;UBERON:0003075,1.07e-18,64;UBERON:0007284,1.07e-18,64;UBERON:0000955,3.41e-17,47;UBERON:0006238,3.41e-17,47;UBERON:0004121,1.28e-16,95;UBERON:0000924,1.28e-16,95;UBERON:0006601,1.28e-16,95;UBERON:0002616,2.67e-16,46;UBERON:0010371,3.27e-15,73;UBERON:0003528,7.59e-14,29;UBERON:0002791,7.59e-14,29;UBERON:0001893,7.59e-14,29;UBERON:0003076,1.61e-13,12;UBERON:0003057,1.61e-13,12;UBERON:0002021,5.54e-13,10;UBERON:0000411,5.54e-13,10;UBERON:0001950,5.54e-13,10;UBERON:0003080,9.61e-13,40;UBERON:0002780,1.04e-11,39;UBERON:0001890,1.04e-11,39;UBERON:0006240,1.04e-11,39;UBERON:0002240,1.15e-10,6;UBERON:0005174,1.15e-10,6;UBERON:0001137,1.15e-10,6;UBERON:0003056,3.18e-10,49;UBERON:0010314,3.61e-10,92;UBERON:0001948,4.12e-09,5;UBERON:0002315,4.12e-09,5;UBERON:0002420,8.64e-09,8;UBERON:0007245,8.64e-09,8;UBERON:0010009,8.64e-09,8;UBERON:0010011,8.64e-09,8;UBERON:0000454,8.64e-09,8;UBERON:0002619,4.43e-08,17;UBERON:0000025,6.48e-08,114;UBERON:0002950,1.71e-07,4;UBERON:0001891,1.71e-07,4;UBERON:0009616,1.71e-07,4;UBERON:0010286,1.71e-07,4;UBERON:0000956,2.30e-07,21;UBERON:0001869,2.30e-07,21;UBERON:0000203,2.30e-07,21;UBERON:0004111,8.18e-07,122
|phase1_expression=0.480446541314382,3.14077866875425,0.909998478779072,0,2.00358291978539,0.33575854382378,0.233612640595526,0.129123323441576,0.140788722151667,0.234064526321993,0.171217968225505,0,0,0.0874204024189974,0.333109761815663,0.607425802169478,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,1.19060606211498,0,0,1.27993938234725,1.37645568640302,4.59385571292016,1.29228598847722,1.50829862880122,1.90023419456374,0.756090389279792,1.77384408524244,0,0,0,0,0.166234645358492,0,0.837063261473815,1.5626706890476,0,1.76469446409304,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0.672187598284928,0,0,0,3.43937983461316,1.05798195854407,3.1691570175309,0,0,0,0,0,0.599200221036809,0.768436610643109,0.207379224616955,0.405017814995072,0.210324961351382,9.14083150092171,10.6016899656774,0.367472397644862,0.191690942036473,0,3.30347642998166,6.89511625660014,5.52983519722476,2.2420668914133,2.47016637726506,2.08365348222704,10.0505879640497,7.31591393041184,4.12555268997387,6.18720029494702,4.9830088279686,4.28718725398191,0.075726193333184,0.151143120213571,0.289864488701678,0,3.39985666853875,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0.289198713839823,0.884610551949874,0,0.441683036920787,0.484875253135222,0,4.68449275218475,9.21565509979202,0.766371165625774,0,0,0,4.6435098215495,1.37250180845588,0.879580464790051,2.43354048269187,1.79000820131231,5.40248915854856,4.2182728397617,0,0.497627882440372,1.51633655060205,0.631325567659422,0.130120442962704,0.229902104433473,0.720248519221397,0.60281927134286,0.748401490664606,0.384341160854549,0.374806898238915,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,1.47202963994889,0.720332286654991,2.31293148088659,0.793351699990633,0,0,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0,0,0,0,0.216138049874694,0.597423819763102,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0.786235980452812,0.224862112384854,0,0.72353147925725,0.50925170356284,0.287696137450811,0.648540907100142,0.274561413188081,1.43768206527355,0,0,0.252578877947112,0,0.482443521363367,0.554259570499814,0.189491411770485,0,0,0,0,0,0.390267295715598,0,0.44292937929755,0.318909537314974,0,0.690739927463582,0.433947175744535,1.50791283939272,0,0.491764273019036,0,6.26147300952389,7.501547941901,0,0,0,0.390438744296638,0,0,0.222798674082394,0,0,0,0.790575555893047,1.60660658210904,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0.493647061806363,0,0.23467170806371,0.63549621259146,0.220528398054962,0,0,0,0,0.164140899745061,0.291480836629851,7.41701208042039,0.170870880797853,0.206386867963223,0.185194527369712,1.13021074202815,0.410082683163076,0.228778173206523,0.169978429993855,0.279902904647316,0,0.954670618015114,0,0,0.216010681643603,0,0,0,0,0,0.259229946583586,0,2.81846469342095,0,0.165458490457098,0.194451188344048,0.258319646955462,0.168956125490778,0,0,1.04859344425711,2.17425708743405,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,3.3885110557024,3.68260189205742,1.14579102687879,3.26521046453006,3.42541259885321,2.2661816921691,4.05013500139084,1.35096360967266,1.81256963593682,3.10656187051092,0.31136204275253,1.19707462020309,0.341467211508268,0.243106717068294,0.838452650511929,0.551530525350042,0.666740183404846,0.618105171716683,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.37456602987953,0.576226371643824,0.459483751644906,0,0.811190281613988,0.38581844092741,0,0.147198920134397,0.342869252385415,0.532427418478012,0.476872379894642,0.436039249896986,0.188218760830661,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,0,0.237270036248348,0.886540341380071,0.818462086339379,0.619747364743864,0.192906610981141,0.999242311751784,0.467863216890817,0.859484216193193,0.191288332068843,0.441182838239031,0
|phase1_expression=0.480446541314382,3.14077866875425,0.909998478779072,0,2.00358291978539,0.33575854382378,0.233612640595526,0.129123323441576,0.140788722151667,0.234064526321993,0.171217968225505,0,0,0.0874204024189974,0.333109761815663,0.607425802169478,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,1.19060606211498,0,0,1.27993938234725,1.37645568640302,4.59385571292016,1.29228598847722,1.50829862880122,1.90023419456374,0.756090389279792,1.77384408524244,0,0,0,0,0.166234645358492,0,0.837063261473815,1.5626706890476,0,1.76469446409304,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0.672187598284928,0,0,0,3.43937983461316,1.05798195854407,3.1691570175309,0,0,0,0,0,0.599200221036809,0.768436610643109,0.207379224616955,0.405017814995072,0.210324961351382,9.14083150092171,10.6016899656774,0.367472397644862,0.191690942036473,0,3.30347642998166,6.89511625660014,5.52983519722476,2.2420668914133,2.47016637726506,2.08365348222704,10.0505879640497,7.31591393041184,4.12555268997387,6.18720029494702,4.9830088279686,4.28718725398191,0.075726193333184,0.151143120213571,0.289864488701678,0,3.39985666853875,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0.289198713839823,0.884610551949874,0,0.441683036920787,0.484875253135222,0,4.68449275218475,9.21565509979202,0.766371165625774,0,0,0,4.6435098215495,1.37250180845588,0.879580464790051,2.43354048269187,1.79000820131231,5.40248915854856,4.2182728397617,0,0.497627882440372,1.51633655060205,0.631325567659422,0.130120442962704,0.229902104433473,0.720248519221397,0.60281927134286,0.748401490664606,0.384341160854549,0.374806898238915,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,1.47202963994889,0.720332286654991,2.31293148088659,0.793351699990633,0,0,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0,0,0,0,0.216138049874694,0.597423819763102,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0.786235980452812,0.224862112384854,0,0.72353147925725,0.50925170356284,0.287696137450811,0.648540907100142,0.274561413188081,1.43768206527355,0,0,0.252578877947112,0,0.482443521363367,0.554259570499814,0.189491411770485,0,0,0,0,0,0.390267295715598,0,0.44292937929755,0.318909537314974,0,0.690739927463582,0.433947175744535,1.50791283939272,0,0.491764273019036,0,6.26147300952389,7.501547941901,0,0,0,0.390438744296638,0,0,0.222798674082394,0,0,0,0.790575555893047,1.60660658210904,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0.493647061806363,0,0.23467170806371,0.63549621259146,0.220528398054962,0,0,0,0,0.164140899745061,0.291480836629851,7.41701208042039,0.170870880797853,0.206386867963223,0.185194527369712,1.13021074202815,0.410082683163076,0.228778173206523,0.169978429993855,0.279902904647316,0,0.954670618015114,0,0,0.216010681643603,0,0,0,0,0,0.259229946583586,0,2.81846469342095,0,0.165458490457098,0.194451188344048,0.258319646955462,0.168956125490778,0,0,1.04859344425711,2.17425708743405,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,3.3885110557024,3.68260189205742,1.14579102687879,3.26521046453006,3.42541259885321,2.2661816921691,4.05013500139084,1.35096360967266,1.81256963593682,3.10656187051092,0.31136204275253,1.19707462020309,0.341467211508268,0.243106717068294,0.838452650511929,0.551530525350042,0.666740183404846,0.618105171716683,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.37456602987953,0.576226371643824,0.459483751644906,0,0.811190281613988,0.38581844092741,0,0.147198920134397,0.342869252385415,0.532427418478012,0.476872379894642,0.436039249896986,0.188218760830661,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,0,0.237270036248348,0.886540341380071,0.818462086339379,0.619747364743864,0.192906610981141,0.999242311751784,0.467863216890817,0.859484216193193,0.191288332068843,0.441182838239031,0
|short_description=p6@Mkrn1
}}
}}

Latest revision as of 03:55, 27 September 2015

Short description:p6@Mkrn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Mkrn1_5end
Coexpression cluster:MCL_coexpression_mm9:742
Association with transcript: 0bp_to_ENSMUST00000170431, uc009bls.1_5end
EntrezGene:Mkrn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Mkrn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A37.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C97.42
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.82e-1723
neuroblast (sensu Vertebrata)7.82e-1723
neuron3.15e-1033
neuronal stem cell3.15e-1033
neuroblast3.15e-1033
electrically signaling cell3.15e-1033
electrically responsive cell6.14e-0839
electrically active cell6.14e-0839
neural cell8.71e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.90e-2654
neural tube8.77e-2452
neural rod8.77e-2452
future spinal cord8.77e-2452
neural keel8.77e-2452
central nervous system9.07e-2473
nervous system7.82e-2375
gray matter2.39e-2034
neurectoderm1.07e-1864
neural plate1.07e-1864
presumptive neural plate1.07e-1864
brain3.41e-1747
future brain3.41e-1747
ectoderm-derived structure1.28e-1695
ectoderm1.28e-1695
presumptive ectoderm1.28e-1695
regional part of brain2.67e-1646
ecto-epithelium3.27e-1573
brain grey matter7.59e-1429
regional part of telencephalon7.59e-1429
telencephalon7.59e-1429
posterior neural tube1.61e-1312
chordal neural plate1.61e-1312
occipital lobe5.54e-1310
visual cortex5.54e-1310
neocortex5.54e-1310
anterior neural tube9.61e-1340
regional part of forebrain1.04e-1139
forebrain1.04e-1139
future forebrain1.04e-1139
spinal cord1.15e-106
dorsal region element1.15e-106
dorsum1.15e-106
pre-chordal neural plate3.18e-1049
structure with developmental contribution from neural crest3.61e-1092
regional part of spinal cord4.12e-095
gray matter of spinal cord4.12e-095
basal ganglion8.64e-098
nuclear complex of neuraxis8.64e-098
aggregate regional part of brain8.64e-098
collection of basal ganglia8.64e-098
cerebral subcortex8.64e-098
regional part of cerebral cortex4.43e-0817
tube6.48e-08114
regional part of midbrain1.71e-074
midbrain1.71e-074
presumptive midbrain1.71e-074
midbrain neural tube1.71e-074
cerebral cortex2.30e-0721
cerebral hemisphere2.30e-0721
pallium2.30e-0721
anatomical conduit8.18e-07122
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