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FFCP PHASE1:Mm9::chr18:37098832..37098866,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr18:37098832..37098866,+
|DHSsupport=NA
|short_description=p3@Pcdha2
|DPIdataset=NA
|description=CAGE_peak_3_at_Pcdha2_5end
|association_with_transcript=0bp_to_NM_198117,uc008eov.2,uc012bbv.1_5end
|EntrezGene=353234
|EntrezGene=353234
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q05C01,Q91Y17,B9EJ92
|UniProt=Q05C01,Q91Y17,B9EJ92
|association_with_transcript=0bp_to_NM_198117,uc008eov.2,uc012bbv.1_5end
|cluster_id=chr18:37098832..37098866,+
|description=CAGE_peak_3_at_Pcdha2_5end
|id=chr18:37098832..37098866,+
|ontology_enrichment_celltype=CL:0000117!7.20e-17!23;CL:0000337!7.20e-17!23;CL:0000540!1.57e-16!33;CL:0000047!1.57e-16!33;CL:0000031!1.57e-16!33;CL:0000404!1.57e-16!33;CL:0000393!8.53e-12!39;CL:0000211!8.53e-12!39;CL:0000221!1.35e-11!44;CL:0000133!1.35e-11!44;CL:0002319!2.22e-11!43;CL:0000055!6.30e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.87e-24,23;CL:0000337,3.87e-24,23;CL:0000540,7.33e-20,33;CL:0000047,7.33e-20,33;CL:0000031,7.33e-20,33;CL:0000404,7.33e-20,33;CL:0000393,2.31e-15,39;CL:0000211,2.31e-15,39;CL:0002319,4.29e-13,43;CL:0000221,1.35e-12,44;CL:0000133,1.35e-12,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.45e-29!71;UBERON:0003075!4.45e-29!71;UBERON:0007284!4.45e-29!71;UBERON:0000073!1.75e-28!75;UBERON:0001016!1.75e-28!75;UBERON:0001017!2.22e-28!73;UBERON:0005743!2.22e-28!73;UBERON:0004121!8.58e-27!102;UBERON:0000924!8.58e-27!102;UBERON:0006601!8.58e-27!102;UBERON:0001049!2.19e-24!52;UBERON:0005068!2.19e-24!52;UBERON:0006241!2.19e-24!52;UBERON:0007135!2.19e-24!52;UBERON:0000033!2.87e-24!63;UBERON:0000955!2.42e-22!50;UBERON:0006238!2.42e-22!50;UBERON:0002616!1.13e-21!49;UBERON:0003056!1.34e-21!49;UBERON:0002020!6.26e-20!34;UBERON:0003080!9.43e-19!40;UBERON:0002780!4.61e-18!39;UBERON:0001890!4.61e-18!39;UBERON:0006240!4.61e-18!39;UBERON:0002791!8.27e-16!29;UBERON:0003528!8.27e-16!29;UBERON:0001893!8.27e-16!29;UBERON:0007811!7.16e-12!86;UBERON:0000956!5.99e-11!21;UBERON:0001869!5.99e-11!21;UBERON:0000203!5.99e-11!21;UBERON:0000153!4.36e-09!94;UBERON:0002619!6.45e-09!17;UBERON:0002021!3.63e-08!10;UBERON:0000411!3.63e-08!10;UBERON:0001950!3.63e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.62e-33,73;UBERON:0000073,8.40e-33,54;UBERON:0002346,6.08e-32,64;UBERON:0003075,6.08e-32,64;UBERON:0007284,6.08e-32,64;UBERON:0001016,6.10e-32,75;UBERON:0001049,1.29e-30,52;UBERON:0005068,1.29e-30,52;UBERON:0006241,1.29e-30,52;UBERON:0007135,1.29e-30,52;UBERON:0002020,3.78e-28,34;UBERON:0004121,4.49e-27,95;UBERON:0000924,4.49e-27,95;UBERON:0006601,4.49e-27,95;UBERON:0010371,5.82e-26,73;UBERON:0000955,9.62e-25,47;UBERON:0006238,9.62e-25,47;UBERON:0002616,8.06e-24,46;UBERON:0003056,4.27e-22,49;UBERON:0003528,4.39e-22,29;UBERON:0002791,4.39e-22,29;UBERON:0001893,4.39e-22,29;UBERON:0003080,8.56e-22,40;UBERON:0002780,7.85e-21,39;UBERON:0001890,7.85e-21,39;UBERON:0006240,7.85e-21,39;UBERON:0010314,2.72e-17,92;UBERON:0000956,3.86e-16,21;UBERON:0001869,3.86e-16,21;UBERON:0000203,3.86e-16,21;UBERON:0002619,3.91e-13,17;UBERON:0002021,2.66e-11,10;UBERON:0000411,2.66e-11,10;UBERON:0001950,2.66e-11,10;UBERON:0003076,3.47e-09,12;UBERON:0003057,3.47e-09,12;UBERON:0002240,3.23e-08,6;UBERON:0005174,3.23e-08,6;UBERON:0001137,3.23e-08,6;UBERON:0001948,2.10e-07,5;UBERON:0002315,2.10e-07,5;UBERON:0002420,4.43e-07,8;UBERON:0007245,4.43e-07,8;UBERON:0010009,4.43e-07,8;UBERON:0010011,4.43e-07,8;UBERON:0000454,4.43e-07,8;UBERON:0000025,9.60e-07,114
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28339259094552,10.0508286061686,8.87363964908651,0,0,0,0,0,0.299600110518405,0,1.97010263386108,2.56511282830212,2.94454945891935,9.99778445413313,8.39300455616131,3.67472397644862,2.68367318851062,2.75765635983006,5.50579404996943,3.06449611404451,4.6081959976873,6.98997324970027,5.48925861614458,7.29278718779464,2.23346399201105,4.50210088025344,3.51435969886663,7.95497180778903,10.6778760599327,8.94717339961443,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0.608930956624282,0.691846491768175,0.60289056221049,0.352766121407114,0,0,0,0,0,0,0,0,2.34224637609238,4.81727425670947,0,0,0,0,4.19413790333504,0.457500602818626,8.92145900001337,2.9550134432687,3.06858548796397,3.1168206683934,3.40706652442291,0.101839363850316,0.124406970610093,0,0.631325567659422,0.130120442962704,0.459804208866946,0.720248519221397,1.35634336052144,2.51735046859913,2.43416068541215,1.49922759295566,2.32833033665114,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,2.3131894342054,9.15851050175631,0,0,0,0.232236671860439,0,0.403367049246685,0.444756087689741,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,3.85321415970701,3.39913891117389,0,0,2.83957397474631,0.390438744296638,2.58508077279359,0,0,0.283076530788832,0.404810701674894,1.16902343164525,1.18586333383957,3.21321316421807,0.851640511249612,0.178065603667255,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,1.70219802876894,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,1.07021290561242,1.81003922662333,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,0.495920734352016,0,0.129614973291793,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,9.60078132449013,9.20650473014354,8.02053718815155,5.84300819968538,5.48066015816514,5.2877572817279,2.02506750069542,3.60256962579376,4.53142408984205,2.5888015587591,0.207574695168353,3.19219898720825,1.19513524027894,0.486213434136588,0.419226325255965,0.183843508450014,1.77797382241292,1.85431551515005,1.92551525755089,2.77966932940177,2.28131369901216,3.2066478035633,1.21733959710847,1.85672941974121,2.12511235135769,0.952587382566147,1.97003354106254,2.50781986602817,1.23625770240992,1.76638704161277,1.37147700954166,1.24233064311536,1.1921809497366,1.30811774969096,2.4468438907986,2.5384382367503,1.64635175585495,0.789209134313529,1.90125759384206,1.12228454331548,0.830445126869219,1.47756723563345,1.63692417267876,2.16911577660352,1.15743966588685,4.24677982494508,1.40358965067245,1.28922632428979,1.14772999241306,0.441182838239031,0.231867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28339259094552,10.0508286061686,8.87363964908651,0,0,0,0,0,0.299600110518405,0,1.97010263386108,2.56511282830212,2.94454945891935,9.99778445413313,8.39300455616131,3.67472397644862,2.68367318851062,2.75765635983006,5.50579404996943,3.06449611404451,4.6081959976873,6.98997324970027,5.48925861614458,7.29278718779464,2.23346399201105,4.50210088025344,3.51435969886663,7.95497180778903,10.6778760599327,8.94717339961443,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0.608930956624282,0.691846491768175,0.60289056221049,0.352766121407114,0,0,0,0,0,0,0,0,2.34224637609238,4.81727425670947,0,0,0,0,4.19413790333504,0.457500602818626,8.92145900001337,2.9550134432687,3.06858548796397,3.1168206683934,3.40706652442291,0.101839363850316,0.124406970610093,0,0.631325567659422,0.130120442962704,0.459804208866946,0.720248519221397,1.35634336052144,2.51735046859913,2.43416068541215,1.49922759295566,2.32833033665114,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,2.3131894342054,9.15851050175631,0,0,0,0.232236671860439,0,0.403367049246685,0.444756087689741,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,3.85321415970701,3.39913891117389,0,0,2.83957397474631,0.390438744296638,2.58508077279359,0,0,0.283076530788832,0.404810701674894,1.16902343164525,1.18586333383957,3.21321316421807,0.851640511249612,0.178065603667255,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,1.70219802876894,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,1.07021290561242,1.81003922662333,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,0.495920734352016,0,0.129614973291793,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,9.60078132449013,9.20650473014354,8.02053718815155,5.84300819968538,5.48066015816514,5.2877572817279,2.02506750069542,3.60256962579376,4.53142408984205,2.5888015587591,0.207574695168353,3.19219898720825,1.19513524027894,0.486213434136588,0.419226325255965,0.183843508450014,1.77797382241292,1.85431551515005,1.92551525755089,2.77966932940177,2.28131369901216,3.2066478035633,1.21733959710847,1.85672941974121,2.12511235135769,0.952587382566147,1.97003354106254,2.50781986602817,1.23625770240992,1.76638704161277,1.37147700954166,1.24233064311536,1.1921809497366,1.30811774969096,2.4468438907986,2.5384382367503,1.64635175585495,0.789209134313529,1.90125759384206,1.12228454331548,0.830445126869219,1.47756723563345,1.63692417267876,2.16911577660352,1.15743966588685,4.24677982494508,1.40358965067245,1.28922632428979,1.14772999241306,0.441182838239031,0.231867835620421
|short_description=p3@Pcdha2
}}
}}

Latest revision as of 05:41, 27 September 2015

Short description:p3@Pcdha2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pcdha2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_NM_198117, uc008eov.2, uc012bbv.1_5end
EntrezGene:Pcdha2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pcdha2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.28
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.95
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F18.92
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G19.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.87e-2423
neuroblast (sensu Vertebrata)3.87e-2423
neuron7.33e-2033
neuronal stem cell7.33e-2033
neuroblast7.33e-2033
electrically signaling cell7.33e-2033
electrically responsive cell2.31e-1539
electrically active cell2.31e-1539
neural cell4.29e-1343
ectodermal cell1.35e-1244
neurectodermal cell1.35e-1244

Uber anatomy
Ontology termp-valuen
central nervous system2.62e-3373
regional part of nervous system8.40e-3354
neurectoderm6.08e-3264
neural plate6.08e-3264
presumptive neural plate6.08e-3264
nervous system6.10e-3275
neural tube1.29e-3052
neural rod1.29e-3052
future spinal cord1.29e-3052
neural keel1.29e-3052
gray matter3.78e-2834
ectoderm-derived structure4.49e-2795
ectoderm4.49e-2795
presumptive ectoderm4.49e-2795
ecto-epithelium5.82e-2673
brain9.62e-2547
future brain9.62e-2547
regional part of brain8.06e-2446
pre-chordal neural plate4.27e-2249
brain grey matter4.39e-2229
regional part of telencephalon4.39e-2229
telencephalon4.39e-2229
anterior neural tube8.56e-2240
regional part of forebrain7.85e-2139
forebrain7.85e-2139
future forebrain7.85e-2139
structure with developmental contribution from neural crest2.72e-1792
cerebral cortex3.86e-1621
cerebral hemisphere3.86e-1621
pallium3.86e-1621
regional part of cerebral cortex3.91e-1317
occipital lobe2.66e-1110
visual cortex2.66e-1110
neocortex2.66e-1110
posterior neural tube3.47e-0912
chordal neural plate3.47e-0912
spinal cord3.23e-086
dorsal region element3.23e-086
dorsum3.23e-086
regional part of spinal cord2.10e-075
gray matter of spinal cord2.10e-075
basal ganglion4.43e-078
nuclear complex of neuraxis4.43e-078
aggregate regional part of brain4.43e-078
collection of basal ganglia4.43e-078
cerebral subcortex4.43e-078
tube9.60e-07114
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