FFCP PHASE1:Mm9::chr4:94316825..94316840,-: Difference between revisions
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{{FFCP|EntrezGene=100061|HGNC=|MCL_coexpression_id=946|UniProt=Q8BZT5,E9Q4D6|association_with_transcript=0bp_to_ENSMUST00000053419,ENSMUST00000163143,NM_175305,uc008tsh.1,uc008tsi.1_5end|description=CAGE_peak_2_at_Lrrc19_5end|id=chr4:94316825..94316840,-|ontology_enrichment_celltype=CL:0002563!1.89e-09!9;CL:0002251!1.89e-09!9;CL:0000239!2.66e-07!6;CL:0000677!2.66e-07!6;CL:0000212!2.66e-07!6;CL:0000584!2.66e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,2.23e-08,6;CL:0000677,2.23e-08,6;CL:0000584,2.23e-08,6;CL:0002563,1.78e-07,9;CL:0002251,1.78e-07,9;CL:0000075,3.94e-07,7;CL:0000682,9.31e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.56e-20!43;UBERON:0000344!1.51e-16!15;UBERON:0005409!2.54e-16!59;UBERON:0001242!3.36e-14!13;UBERON:0000060!3.36e-14!13;UBERON:0001262!3.36e-14!13;UBERON:0004786!3.36e-14!13;UBERON:0004923!6.39e-10!24;UBERON:0003350!1.89e-09!9;UBERON:0004808!1.89e-09!9;UBERON:0001277!1.89e-09!9;UBERON:0000485!2.39e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.33e-38,31;UBERON:0005409,1.79e-25,47;UBERON:0000344,3.06e-18,15;UBERON:0001242,1.48e-14,13;UBERON:0001262,1.48e-14,13;UBERON:0004786,1.48e-14,13;UBERON:0004923,2.18e-10,24;UBERON:0002108,3.81e-09,4;UBERON:0001007,2.94e-08,116;UBERON:0001555,2.94e-08,116;UBERON:0007026,2.94e-08,116;UBERON:0004119,5.23e-08,118;UBERON:0000925,5.23e-08,118;UBERON:0006595,5.23e-08,118;UBERON:0003350,1.78e-07,9;UBERON:0004808,1.78e-07,9;UBERON:0001277,1.78e-07,9;UBERON:0000331,2.41e-07,3;UBERON:0002116,2.41e-07,3;UBERON:0001204,2.41e-07,3;UBERON:0001168,2.41e-07,3;UBERON:0004921,7.93e-07,114|phase1_expression=0,12.563114675017,10.9199817453489,8.16653370528441,9.01612313903425,3.3575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,19.679068003589,12.6175104586944,12.6331032105304,7.32295393470427,7.75696437669201,28.3134894989997,20.6664706403143,3.76941868114018,0,0,0,0.866554859253824,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,7.72444310724635,0,0,0,0,0,0,0,0,0,0,15.9857431606684,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,7.45567044872489,0,0,22.7356779135646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.0138073883708,14.0158800331678,0,0,0.257734922644187,3.63030344322017,7.11609740303585,8.94060442729028,27.9972146311262,13.5053142873689,12.8180956488137,13.3300836267571,13.4525220112193,22.4704852163555,19.0201483889731,30.2694735346638,0,0.228497025219458,0,0.814605311381257,4.07300223052014,7.01358198903186,20.1092188055138,61.8486520034533,61.7005000416603,84.5270572864334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10113951801865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0,0,0,9.85073797017626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0.760437899670719,0.565879024158229,0.561849044819294,0.448176066834085,0.459483751644906,1.42888107384922,0.115884325944855,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,0.354951612318675,0.476872379894642,0.290692833264657,0.470546902076653,0.761531471025089,0,0.789209134313529,0,0,0.118635018124174,0.492522411877817,0,0.619747364743864,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421|short_description=p2@Lrrc19}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100061 | |||
|HGNC= | |||
|MCL_coexpression_id=946 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BZT5,E9Q4D6 | |||
|association_with_transcript=0bp_to_ENSMUST00000053419,ENSMUST00000163143,NM_175305,uc008tsh.1,uc008tsi.1_5end | |||
|cluster_id=chr4:94316825..94316840,- | |||
|description=CAGE_peak_2_at_Lrrc19_5end | |||
|id=chr4:94316825..94316840,- | |||
|ontology_enrichment_celltype=CL:0002563!1.89e-09!9;CL:0002251!1.89e-09!9;CL:0000239!2.66e-07!6;CL:0000677!2.66e-07!6;CL:0000212!2.66e-07!6;CL:0000584!2.66e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.23e-08,6;CL:0000677,2.23e-08,6;CL:0000584,2.23e-08,6;CL:0002563,1.78e-07,9;CL:0002251,1.78e-07,9;CL:0000075,3.94e-07,7;CL:0000682,9.31e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.56e-20!43;UBERON:0000344!1.51e-16!15;UBERON:0005409!2.54e-16!59;UBERON:0001242!3.36e-14!13;UBERON:0000060!3.36e-14!13;UBERON:0001262!3.36e-14!13;UBERON:0004786!3.36e-14!13;UBERON:0004923!6.39e-10!24;UBERON:0003350!1.89e-09!9;UBERON:0004808!1.89e-09!9;UBERON:0001277!1.89e-09!9;UBERON:0000485!2.39e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.33e-38,31;UBERON:0005409,1.79e-25,47;UBERON:0000344,3.06e-18,15;UBERON:0001242,1.48e-14,13;UBERON:0001262,1.48e-14,13;UBERON:0004786,1.48e-14,13;UBERON:0004923,2.18e-10,24;UBERON:0002108,3.81e-09,4;UBERON:0001007,2.94e-08,116;UBERON:0001555,2.94e-08,116;UBERON:0007026,2.94e-08,116;UBERON:0004119,5.23e-08,118;UBERON:0000925,5.23e-08,118;UBERON:0006595,5.23e-08,118;UBERON:0003350,1.78e-07,9;UBERON:0004808,1.78e-07,9;UBERON:0001277,1.78e-07,9;UBERON:0000331,2.41e-07,3;UBERON:0002116,2.41e-07,3;UBERON:0001204,2.41e-07,3;UBERON:0001168,2.41e-07,3;UBERON:0004921,7.93e-07,114 | |||
|phase1_expression=0,12.563114675017,10.9199817453489,8.16653370528441,9.01612313903425,3.3575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,19.679068003589,12.6175104586944,12.6331032105304,7.32295393470427,7.75696437669201,28.3134894989997,20.6664706403143,3.76941868114018,0,0,0,0.866554859253824,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,7.72444310724635,0,0,0,0,0,0,0,0,0,0,15.9857431606684,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,7.45567044872489,0,0,22.7356779135646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.0138073883708,14.0158800331678,0,0,0.257734922644187,3.63030344322017,7.11609740303585,8.94060442729028,27.9972146311262,13.5053142873689,12.8180956488137,13.3300836267571,13.4525220112193,22.4704852163555,19.0201483889731,30.2694735346638,0,0.228497025219458,0,0.814605311381257,4.07300223052014,7.01358198903186,20.1092188055138,61.8486520034533,61.7005000416603,84.5270572864334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10113951801865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0,0,0,9.85073797017626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0.760437899670719,0.565879024158229,0.561849044819294,0.448176066834085,0.459483751644906,1.42888107384922,0.115884325944855,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,0.354951612318675,0.476872379894642,0.290692833264657,0.470546902076653,0.761531471025089,0,0.789209134313529,0,0,0.118635018124174,0.492522411877817,0,0.619747364743864,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p2@Lrrc19 | |||
}} |
Latest revision as of 07:17, 27 September 2015
Short description: | p2@Lrrc19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lrrc19_5end |
Coexpression cluster: | MCL_coexpression_mm9:946 |
Association with transcript: | 0bp_to_ENSMUST00000053419, ENSMUST00000163143, NM_175305, uc008tsh.1, uc008tsi.1_5end |
EntrezGene: | Lrrc19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.23e-08 | 6 |
gut absorptive cell | 2.23e-08 | 6 |
enterocyte | 2.23e-08 | 6 |
intestinal epithelial cell | 1.78e-07 | 9 |
epithelial cell of alimentary canal | 1.78e-07 | 9 |
columnar/cuboidal epithelial cell | 3.94e-07 | 7 |
M cell of gut | 9.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.33e-38 | 31 |
gastrointestinal system | 1.79e-25 | 47 |
mucosa | 3.06e-18 | 15 |
intestinal mucosa | 1.48e-14 | 13 |
wall of intestine | 1.48e-14 | 13 |
gastrointestinal system mucosa | 1.48e-14 | 13 |
organ component layer | 2.18e-10 | 24 |
small intestine | 3.81e-09 | 4 |
digestive system | 2.94e-08 | 116 |
digestive tract | 2.94e-08 | 116 |
primitive gut | 2.94e-08 | 116 |
endoderm-derived structure | 5.23e-08 | 118 |
endoderm | 5.23e-08 | 118 |
presumptive endoderm | 5.23e-08 | 118 |
epithelium of mucosa | 1.78e-07 | 9 |
gastrointestinal system epithelium | 1.78e-07 | 9 |
intestinal epithelium | 1.78e-07 | 9 |
ileal mucosa | 2.41e-07 | 3 |
ileum | 2.41e-07 | 3 |
mucosa of small intestine | 2.41e-07 | 3 |
wall of small intestine | 2.41e-07 | 3 |
subdivision of digestive tract | 7.93e-07 | 114 |