FFCP PHASE1:Mm9::chr4:95246154..95246190,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=75578|HGNC=|MCL_coexpression_id=8|UniProt=D6RG41,B1AY72,B1AY71|association_with_transcript=0bp_to_ENSMUST00000134012,ENSMUST00000147783,ENSMUST00000150830_5end|description=CAGE_peak_2_at_Fggy_5end|id=chr4:95246154..95246190,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!3.17e-30!49;UBERON:0005173!3.17e-30!49;UBERON:0002417!3.17e-30!49;UBERON:0000916!3.17e-30!49;UBERON:0002107!1.11e-21!22;UBERON:0007499!1.11e-21!22;UBERON:0006925!1.11e-21!22;UBERON:0009497!1.11e-21!22;UBERON:0000015!1.11e-21!22;UBERON:0002423!1.11e-21!22;UBERON:0006235!1.11e-21!22;UBERON:0008835!1.11e-21!22;UBERON:0003894!1.11e-21!22;UBERON:0004161!1.11e-21!22;UBERON:0008836!1.11e-21!22;UBERON:0009854!2.46e-20!23;UBERON:0009856!2.46e-20!23;UBERON:0009569!4.40e-19!66;UBERON:0002365!5.59e-18!25;UBERON:0002330!5.59e-18!25;UBERON:0005256!1.16e-14!47;UBERON:0005177!1.85e-13!85;UBERON:0002100!2.78e-10!98;UBERON:0002113!5.74e-10!14;UBERON:0003918!5.74e-10!14;UBERON:0005095!5.74e-10!14;UBERON:0007687!5.74e-10!14;UBERON:0003914!1.01e-09!47;UBERON:0006554!3.42e-08!16;UBERON:0001008!1.81e-07!17;UBERON:0003104!3.96e-07!131;UBERON:0009142!3.96e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.04e-28,49;UBERON:0005173,1.04e-28,49;UBERON:0002417,1.04e-28,49;UBERON:0000916,1.04e-28,49;UBERON:0002107,2.49e-25,22;UBERON:0007499,2.49e-25,22;UBERON:0006925,2.49e-25,22;UBERON:0009497,2.49e-25,22;UBERON:0000015,2.49e-25,22;UBERON:0002423,2.49e-25,22;UBERON:0006235,2.49e-25,22;UBERON:0008835,2.49e-25,22;UBERON:0003894,2.49e-25,22;UBERON:0004161,2.49e-25,22;UBERON:0008836,2.49e-25,22;UBERON:0009854,6.72e-24,23;UBERON:0009856,6.72e-24,23;UBERON:0002365,2.19e-21,25;UBERON:0002330,2.19e-21,25;UBERON:0003104,1.12e-20,61;UBERON:0009142,1.12e-20,61;UBERON:0009569,3.22e-18,66;UBERON:0005256,1.53e-14,45;UBERON:0005177,2.46e-13,79;UBERON:0002113,2.04e-12,14;UBERON:0003918,2.04e-12,14;UBERON:0011143,2.04e-12,14;UBERON:0005095,2.04e-12,14;UBERON:0007687,2.04e-12,14;UBERON:0003914,1.30e-10,47;UBERON:0002100,2.28e-10,90;UBERON:0006554,7.32e-09,18;UBERON:0001008,3.25e-08,19;UBERON:0000489,4.10e-07,21;UBERON:0002368,7.03e-07,60|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07911256435163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,104.971712991729,28.5587960157255,73.9393372543809,89.0193691903307,94.0856462904405,16.431997155415,0,0,0,0.985903938436763,0,0,0,0,0,0,24.4353502598788,0,0.593768556259299,0.346970653532272,1.21786191324856,3.22861696158482,1.3565037649736,0.705532242814229,0.376999773989026,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32391173005411,1.36847667671102,1.26361379216837,0,0,0,0,1.80845781402858,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,2.65535061334314,5.02693455482807,6.76246414038483,14.255592949172,12.6069116658957,9.46833568519301,40.4713837595247,84.580614792312,79.598355015577,73.1745182056277,126.8817243933,1.83529616287703,6.6830058338489,11.0182435068578,15.8230894683032,31.3530307678142,43.2863948028414,36.537409456253,33.2377214888823,63.972809272823,71.8841032636773,75.9167533243747,94.2353772805973,148.011222477007,93.2866550313943,151.969709229461,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24645922567079,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.655087691238533,2.83215127408124,9.6704543198643,0.26175594198403,0,0,0,0,0.165458490457098,0,0.516639293910924,0,0.117357238645754,1.3020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,3.16038732188782,2.30574478890781,4.59608771125035,5.11167473943715,4.32673620201678,2.56735367673452,3.28506375292937,3.29523089857312,3.2066478035633,4.775716880964,3.77748399188729,3.67587001315925,2.38146845641537,2.43357084484197,3.27945674788299,2.47251540481984,4.26876868389752,4.80016953339582,2.8396128985494,2.86123427936785,4.94177816549917,3.67026583619789,5.07687647350059,4.024415403201,4.47218509444333,4.07412341537585,2.24456908663095,4.27086065247027,2.85662998889134,1.63692417267876,2.78886314134739,3.66522560864169,0,2.33931608445408,4.29742108096597,0,0.220591419119515,0.463735671240843|short_description=p2@Fggy}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75578 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=D6RG41,B1AY72,B1AY71 | |||
|association_with_transcript=0bp_to_ENSMUST00000134012,ENSMUST00000147783,ENSMUST00000150830_5end | |||
|cluster_id=chr4:95246154..95246190,+ | |||
|description=CAGE_peak_2_at_Fggy_5end | |||
|id=chr4:95246154..95246190,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.17e-30!49;UBERON:0005173!3.17e-30!49;UBERON:0002417!3.17e-30!49;UBERON:0000916!3.17e-30!49;UBERON:0002107!1.11e-21!22;UBERON:0007499!1.11e-21!22;UBERON:0006925!1.11e-21!22;UBERON:0009497!1.11e-21!22;UBERON:0000015!1.11e-21!22;UBERON:0002423!1.11e-21!22;UBERON:0006235!1.11e-21!22;UBERON:0008835!1.11e-21!22;UBERON:0003894!1.11e-21!22;UBERON:0004161!1.11e-21!22;UBERON:0008836!1.11e-21!22;UBERON:0009854!2.46e-20!23;UBERON:0009856!2.46e-20!23;UBERON:0009569!4.40e-19!66;UBERON:0002365!5.59e-18!25;UBERON:0002330!5.59e-18!25;UBERON:0005256!1.16e-14!47;UBERON:0005177!1.85e-13!85;UBERON:0002100!2.78e-10!98;UBERON:0002113!5.74e-10!14;UBERON:0003918!5.74e-10!14;UBERON:0005095!5.74e-10!14;UBERON:0007687!5.74e-10!14;UBERON:0003914!1.01e-09!47;UBERON:0006554!3.42e-08!16;UBERON:0001008!1.81e-07!17;UBERON:0003104!3.96e-07!131;UBERON:0009142!3.96e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.04e-28,49;UBERON:0005173,1.04e-28,49;UBERON:0002417,1.04e-28,49;UBERON:0000916,1.04e-28,49;UBERON:0002107,2.49e-25,22;UBERON:0007499,2.49e-25,22;UBERON:0006925,2.49e-25,22;UBERON:0009497,2.49e-25,22;UBERON:0000015,2.49e-25,22;UBERON:0002423,2.49e-25,22;UBERON:0006235,2.49e-25,22;UBERON:0008835,2.49e-25,22;UBERON:0003894,2.49e-25,22;UBERON:0004161,2.49e-25,22;UBERON:0008836,2.49e-25,22;UBERON:0009854,6.72e-24,23;UBERON:0009856,6.72e-24,23;UBERON:0002365,2.19e-21,25;UBERON:0002330,2.19e-21,25;UBERON:0003104,1.12e-20,61;UBERON:0009142,1.12e-20,61;UBERON:0009569,3.22e-18,66;UBERON:0005256,1.53e-14,45;UBERON:0005177,2.46e-13,79;UBERON:0002113,2.04e-12,14;UBERON:0003918,2.04e-12,14;UBERON:0011143,2.04e-12,14;UBERON:0005095,2.04e-12,14;UBERON:0007687,2.04e-12,14;UBERON:0003914,1.30e-10,47;UBERON:0002100,2.28e-10,90;UBERON:0006554,7.32e-09,18;UBERON:0001008,3.25e-08,19;UBERON:0000489,4.10e-07,21;UBERON:0002368,7.03e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07911256435163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,104.971712991729,28.5587960157255,73.9393372543809,89.0193691903307,94.0856462904405,16.431997155415,0,0,0,0.985903938436763,0,0,0,0,0,0,24.4353502598788,0,0.593768556259299,0.346970653532272,1.21786191324856,3.22861696158482,1.3565037649736,0.705532242814229,0.376999773989026,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32391173005411,1.36847667671102,1.26361379216837,0,0,0,0,1.80845781402858,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,2.65535061334314,5.02693455482807,6.76246414038483,14.255592949172,12.6069116658957,9.46833568519301,40.4713837595247,84.580614792312,79.598355015577,73.1745182056277,126.8817243933,1.83529616287703,6.6830058338489,11.0182435068578,15.8230894683032,31.3530307678142,43.2863948028414,36.537409456253,33.2377214888823,63.972809272823,71.8841032636773,75.9167533243747,94.2353772805973,148.011222477007,93.2866550313943,151.969709229461,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24645922567079,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.655087691238533,2.83215127408124,9.6704543198643,0.26175594198403,0,0,0,0,0.165458490457098,0,0.516639293910924,0,0.117357238645754,1.3020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,3.16038732188782,2.30574478890781,4.59608771125035,5.11167473943715,4.32673620201678,2.56735367673452,3.28506375292937,3.29523089857312,3.2066478035633,4.775716880964,3.77748399188729,3.67587001315925,2.38146845641537,2.43357084484197,3.27945674788299,2.47251540481984,4.26876868389752,4.80016953339582,2.8396128985494,2.86123427936785,4.94177816549917,3.67026583619789,5.07687647350059,4.024415403201,4.47218509444333,4.07412341537585,2.24456908663095,4.27086065247027,2.85662998889134,1.63692417267876,2.78886314134739,3.66522560864169,0,2.33931608445408,4.29742108096597,0,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Fggy | |||
}} |
Latest revision as of 07:26, 27 September 2015
Short description: | p2@Fggy |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fggy_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000134012, ENSMUST00000147783, ENSMUST00000150830_5end |
EntrezGene: | Fggy |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.04e-28 | 49 |
abdominal segment element | 1.04e-28 | 49 |
abdominal segment of trunk | 1.04e-28 | 49 |
abdomen | 1.04e-28 | 49 |
liver | 2.49e-25 | 22 |
epithelial sac | 2.49e-25 | 22 |
digestive gland | 2.49e-25 | 22 |
epithelium of foregut-midgut junction | 2.49e-25 | 22 |
anatomical boundary | 2.49e-25 | 22 |
hepatobiliary system | 2.49e-25 | 22 |
foregut-midgut junction | 2.49e-25 | 22 |
hepatic diverticulum | 2.49e-25 | 22 |
liver primordium | 2.49e-25 | 22 |
septum transversum | 2.49e-25 | 22 |
liver bud | 2.49e-25 | 22 |
digestive tract diverticulum | 6.72e-24 | 23 |
sac | 6.72e-24 | 23 |
exocrine gland | 2.19e-21 | 25 |
exocrine system | 2.19e-21 | 25 |
mesenchyme | 1.12e-20 | 61 |
entire embryonic mesenchyme | 1.12e-20 | 61 |
subdivision of trunk | 3.22e-18 | 66 |
trunk mesenchyme | 1.53e-14 | 45 |
trunk region element | 2.46e-13 | 79 |
kidney | 2.04e-12 | 14 |
kidney mesenchyme | 2.04e-12 | 14 |
upper urinary tract | 2.04e-12 | 14 |
kidney rudiment | 2.04e-12 | 14 |
kidney field | 2.04e-12 | 14 |
epithelial tube | 1.30e-10 | 47 |
trunk | 2.28e-10 | 90 |
urinary system structure | 7.32e-09 | 18 |
renal system | 3.25e-08 | 19 |
cavitated compound organ | 4.10e-07 | 21 |
endocrine gland | 7.03e-07 | 60 |