FFCP PHASE1:Mm9::chr15:89330547..89330576,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58234 | |EntrezGene=58234 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=189 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000135214_5end | |association_with_transcript=0bp_to_ENSMUST00000135214_5end | ||
|cluster_id=chr15:89330547..89330576,+ | |||
|description=CAGE_peak_4_at_Shank3_5end | |description=CAGE_peak_4_at_Shank3_5end | ||
|id=chr15:89330547..89330576,+ | |id=chr15:89330547..89330576,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.45e-07!23;CL:0000337!1.45e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.96e-12,23;CL:0000337,3.96e-12,23;CL:0002319,6.70e-09,43;CL:0000221,1.35e-08,44;CL:0000133,1.35e-08,44;CL:0000540,2.06e-07,33;CL:0000047,2.06e-07,33;CL:0000031,2.06e-07,33;CL:0000404,2.06e-07,33;CL:0002610,3.67e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.34e-15!52;UBERON:0005068!1.34e-15!52;UBERON:0006241!1.34e-15!52;UBERON:0007135!1.34e-15!52;UBERON:0001017!8.57e-15!73;UBERON:0005743!8.57e-15!73;UBERON:0000955!1.46e-14!50;UBERON:0006238!1.46e-14!50;UBERON:0002616!1.51e-14!49;UBERON:0000073!5.55e-14!75;UBERON:0001016!5.55e-14!75;UBERON:0002020!7.74e-14!34;UBERON:0000033!4.66e-13!63;UBERON:0002346!3.60e-12!71;UBERON:0003075!3.60e-12!71;UBERON:0007284!3.60e-12!71;UBERON:0003080!7.19e-11!40;UBERON:0002791!9.12e-11!29;UBERON:0003528!9.12e-11!29;UBERON:0001893!9.12e-11!29;UBERON:0004121!1.33e-10!102;UBERON:0000924!1.33e-10!102;UBERON:0006601!1.33e-10!102;UBERON:0002780!1.63e-10!39;UBERON:0001890!1.63e-10!39;UBERON:0006240!1.63e-10!39;UBERON:0003056!1.87e-10!49;UBERON:0000956!2.08e-08!21;UBERON:0001869!2.08e-08!21;UBERON:0000203!2.08e-08!21;UBERON:0000468!6.52e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.88e-25,54;UBERON:0002020,2.14e-21,34;UBERON:0001017,2.17e-20,73;UBERON:0001049,6.19e-20,52;UBERON:0005068,6.19e-20,52;UBERON:0006241,6.19e-20,52;UBERON:0007135,6.19e-20,52;UBERON:0001016,1.33e-19,75;UBERON:0002346,8.90e-15,64;UBERON:0003075,8.90e-15,64;UBERON:0007284,8.90e-15,64;UBERON:0003528,1.26e-14,29;UBERON:0002791,1.26e-14,29;UBERON:0001893,1.26e-14,29;UBERON:0004121,1.42e-14,95;UBERON:0000924,1.42e-14,95;UBERON:0006601,1.42e-14,95;UBERON:0002616,1.83e-14,46;UBERON:0000955,5.02e-14,47;UBERON:0006238,5.02e-14,47;UBERON:0010371,4.58e-13,73;UBERON:0002780,7.22e-13,39;UBERON:0001890,7.22e-13,39;UBERON:0006240,7.22e-13,39;UBERON:0003080,2.04e-12,40;UBERON:0001948,2.35e-09,5;UBERON:0002315,2.35e-09,5;UBERON:0000956,2.50e-09,21;UBERON:0001869,2.50e-09,21;UBERON:0000203,2.50e-09,21;UBERON:0003056,3.36e-09,49;UBERON:0003076,7.58e-09,12;UBERON:0003057,7.58e-09,12;UBERON:0002619,2.12e-08,17;UBERON:0000369,2.70e-08,5;UBERON:0002435,2.70e-08,5;UBERON:0000204,2.70e-08,5;UBERON:0010082,2.70e-08,5;UBERON:0010314,4.31e-08,92;UBERON:0002021,7.23e-08,10;UBERON:0000411,7.23e-08,10;UBERON:0001950,7.23e-08,10;UBERON:0002240,1.05e-07,6;UBERON:0005174,1.05e-07,6;UBERON:0001137,1.05e-07,6;UBERON:0002106,2.21e-07,6;UBERON:0004457,2.21e-07,6;UBERON:0000042,2.21e-07,6;UBERON:0004854,2.21e-07,6;UBERON:0009034,2.21e-07,6;UBERON:0002095,2.21e-07,6;UBERON:0004782,2.21e-07,6;UBERON:0003281,2.21e-07,6;UBERON:0009664,2.21e-07,6;UBERON:0002296,2.21e-07,6;UBERON:0005602,2.21e-07,6;UBERON:0001179,2.21e-07,6;UBERON:0006293,2.21e-07,6;UBERON:0004684,3.67e-07,3;UBERON:0002275,3.67e-07,3;UBERON:0002420,8.28e-07,8;UBERON:0007245,8.28e-07,8;UBERON:0010009,8.28e-07,8;UBERON:0010011,8.28e-07,8;UBERON:0000454,8.28e-07,8 | |||
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| ||
|short_description=p4@Shank3 | |short_description=p4@Shank3 | ||
}} | }} |
Latest revision as of 07:44, 27 September 2015
Short description: | p4@Shank3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Shank3_5end |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | 0bp_to_ENSMUST00000135214_5end |
EntrezGene: | Shank3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.96e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.96e-12 | 23 |
neural cell | 6.70e-09 | 43 |
ectodermal cell | 1.35e-08 | 44 |
neurectodermal cell | 1.35e-08 | 44 |
neuron | 2.06e-07 | 33 |
neuronal stem cell | 2.06e-07 | 33 |
neuroblast | 2.06e-07 | 33 |
electrically signaling cell | 2.06e-07 | 33 |
raphe nuclei neuron | 3.67e-07 | 3 |