FFCP PHASE1:Mm9::chr11:48684910..48684926,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15944 | |EntrezGene=15944 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1279 | |||
|TSSclassifier=NA | |||
|UniProt=Q5NCB5 | |UniProt=Q5NCB5 | ||
|association_with_transcript=0bp_to_ENSMUST00000097271_5end | |association_with_transcript=0bp_to_ENSMUST00000097271_5end | ||
|cluster_id=chr11:48684910..48684926,- | |||
|description=CAGE_peak_3_at_Irgm1_5end | |description=CAGE_peak_3_at_Irgm1_5end | ||
|id=chr11:48684910..48684926,- | |id=chr11:48684910..48684926,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!5.52e-13!51;UBERON:0002405!1.17e-12!70;UBERON:0005256!2.24e-11!47;UBERON:0000490!5.54e-11!66;UBERON:0003104!1.23e-10!131;UBERON:0009142!1.23e-10!131;UBERON:0002365!1.74e-10!25;UBERON:0002330!1.74e-10!25;UBERON:0002530!8.79e-10!65;UBERON:0002107!1.13e-09!22;UBERON:0007499!1.13e-09!22;UBERON:0006925!1.13e-09!22;UBERON:0009497!1.13e-09!22;UBERON:0000015!1.13e-09!22;UBERON:0002423!1.13e-09!22;UBERON:0006235!1.13e-09!22;UBERON:0008835!1.13e-09!22;UBERON:0003894!1.13e-09!22;UBERON:0004161!1.13e-09!22;UBERON:0008836!1.13e-09!22;UBERON:0000926!1.56e-09!193;UBERON:0004120!1.56e-09!193;UBERON:0006603!1.56e-09!193;UBERON:0002368!3.41e-09!60;UBERON:0005911!4.18e-09!69;UBERON:0003929!4.65e-09!55;UBERON:0005172!6.81e-09!49;UBERON:0005173!6.81e-09!49;UBERON:0002417!6.81e-09!49;UBERON:0000916!6.81e-09!49;UBERON:0004119!8.84e-09!130;UBERON:0000925!8.84e-09!130;UBERON:0006595!8.84e-09!130;UBERON:0004921!1.27e-08!126;UBERON:0004185!1.27e-08!126;UBERON:0000077!1.52e-08!97;UBERON:0009854!1.54e-08!23;UBERON:0009856!1.54e-08!23;UBERON:0001007!3.03e-08!128;UBERON:0001555!3.03e-08!128;UBERON:0007026!3.03e-08!128;UBERON:0009569!5.87e-08!66;UBERON:0001041!9.36e-08!92 | |ontology_enrichment_uberon=UBERON:0005057!5.52e-13!51;UBERON:0002405!1.17e-12!70;UBERON:0005256!2.24e-11!47;UBERON:0000490!5.54e-11!66;UBERON:0003104!1.23e-10!131;UBERON:0009142!1.23e-10!131;UBERON:0002365!1.74e-10!25;UBERON:0002330!1.74e-10!25;UBERON:0002530!8.79e-10!65;UBERON:0002107!1.13e-09!22;UBERON:0007499!1.13e-09!22;UBERON:0006925!1.13e-09!22;UBERON:0009497!1.13e-09!22;UBERON:0000015!1.13e-09!22;UBERON:0002423!1.13e-09!22;UBERON:0006235!1.13e-09!22;UBERON:0008835!1.13e-09!22;UBERON:0003894!1.13e-09!22;UBERON:0004161!1.13e-09!22;UBERON:0008836!1.13e-09!22;UBERON:0000926!1.56e-09!193;UBERON:0004120!1.56e-09!193;UBERON:0006603!1.56e-09!193;UBERON:0002368!3.41e-09!60;UBERON:0005911!4.18e-09!69;UBERON:0003929!4.65e-09!55;UBERON:0005172!6.81e-09!49;UBERON:0005173!6.81e-09!49;UBERON:0002417!6.81e-09!49;UBERON:0000916!6.81e-09!49;UBERON:0004119!8.84e-09!130;UBERON:0000925!8.84e-09!130;UBERON:0006595!8.84e-09!130;UBERON:0004921!1.27e-08!126;UBERON:0004185!1.27e-08!126;UBERON:0000077!1.52e-08!97;UBERON:0009854!1.54e-08!23;UBERON:0009856!1.54e-08!23;UBERON:0001007!3.03e-08!128;UBERON:0001555!3.03e-08!128;UBERON:0007026!3.03e-08!128;UBERON:0009569!5.87e-08!66;UBERON:0001041!9.36e-08!92 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,7.95e-13,45;UBERON:0001041,2.02e-12,80;UBERON:0000490,2.92e-12,66;UBERON:0004119,3.53e-12,118;UBERON:0000925,3.53e-12,118;UBERON:0006595,3.53e-12,118;UBERON:0004921,3.84e-12,114;UBERON:0001007,1.77e-11,116;UBERON:0001555,1.77e-11,116;UBERON:0007026,1.77e-11,116;UBERON:0002365,2.80e-11,25;UBERON:0002330,2.80e-11,25;UBERON:0005911,2.47e-10,69;UBERON:0002107,2.67e-10,22;UBERON:0007499,2.67e-10,22;UBERON:0006925,2.67e-10,22;UBERON:0009497,2.67e-10,22;UBERON:0000015,2.67e-10,22;UBERON:0002423,2.67e-10,22;UBERON:0006235,2.67e-10,22;UBERON:0008835,2.67e-10,22;UBERON:0003894,2.67e-10,22;UBERON:0004161,2.67e-10,22;UBERON:0008836,2.67e-10,22;UBERON:0002530,2.89e-10,65;UBERON:0003929,4.30e-10,55;UBERON:0002368,9.21e-10,60;UBERON:0009854,1.84e-09,23;UBERON:0009856,1.84e-09,23;UBERON:0003104,5.27e-09,61;UBERON:0009142,5.27e-09,61;UBERON:0005172,8.22e-09,49;UBERON:0005173,8.22e-09,49;UBERON:0002417,8.22e-09,49;UBERON:0000916,8.22e-09,49;UBERON:0002100,3.32e-08,90;UBERON:0009569,6.29e-08,66;UBERON:0000077,5.53e-07,35;UBERON:0000949,6.32e-07,72 | |||
|phase1_expression=0.640595388419176,0.697950815278722,3.18499467572675,0,0,1.17515490338323,1.63528848416868,1.42035655785734,0.703943610758334,0.936258105287974,0,0.398860794976682,1.54080656938085,2.44777126773193,1.66554880907831,3.44207954562704,2.09868563438444,0.473193248037357,0.411343300817216,0.42438965179803,0.850432901510698,2.08510997521859,0.783599367416806,0.47997726838022,0.45881856213434,0.57423196411502,1.7230479846363,2.15471232685889,1.71021077510736,2.01624103807945,1.99557459589774,0,0,0,0.288851619751275,2.32728503501889,0.816677425049476,5.02237956884289,1.5626706890476,6.28228492768558,1.76469446409304,2.04913645487534,4.36959317728038,3.65100772129174,3.14268486780495,1.46837401729345,0.782391344348039,0.65407546914134,0.878744730937887,0.58328969722285,1.1198913730029,0,0,0,1.34437519656986,2.05807548828758,1.14613375975503,1.54701627683233,0,0,0,0,0.889294796111139,0.449949858640699,4.94433181283487,0.7104801149461,1.19840044207362,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.127687338085188,0.307213066512487,0,0,0,0,0.56276261003168,0.30559649555362,0,0.284743361598206,0.186399445825301,2.12033341332915,3.24957708459178,2.31891590961342,4.30211938490693,3.39985666853875,5.39703191637817,7.14754059192436,4.03224198387602,1.40444420131752,2.04516387093669,1.81850203222008,0.35333957451034,0.281686839553361,0,2.54805239706646,0,0.649473123033642,0.253359865475099,0.505524445014783,3.08296475241462,1.29468941823586,2.82040064223167,0.520455980298408,0.913396434936424,0.230615497256059,3.91878865436819,3.41007250693544,3.51866455723091,1.97755974187499,1.59059292611903,3.5384422077995,0.970601099684455,1.54589062922275,1.45462575940567,0,0.878342391034642,0.628340120440365,1.78819938646014,1.07833612055328,1.19980546198682,1.14363204365758,0.149790639404823,2.74500361691176,0,0.521472960576829,0.767146371990992,0.83115217823824,0.648965052271031,1.2220723662038,1.8661045591514,0.505445516867349,1.68353484709179,0.260240885925407,0,0.180062129805349,0.60281927134286,0.204109497453984,0.2562274405697,0.187403449119458,0.776110112217047,0,0.378212160335639,0,0.219195732427575,0.278047249225598,0.696504333044333,0.411564272815887,0.796137067273973,2.1066395619397,2.57347907114715,0,0,0,0.540186184383045,0.23674473558521,0.196764231747404,0.771335564436891,0.930135779001631,0.268273401399619,1.16765342367169,0.658239399653922,0.820837320395476,1.54030738137126,0.584799949701329,3.73235195994786,2.01309628140558,0.210289948564127,0.411618449517138,0,2.90895623329899,0.426576501070468,0.696710015581316,0.515469845288373,1.21010114774006,1.33426826306922,0.760902504450237,0.949058123089023,1.4822905925161,1.25667604400135,1.79060824837036,1.55971269695296,1.79763881730844,2.16138049874694,0.995706366271836,0.379335801906163,0.342745537829186,0,0.407302655690628,1.93952487167626,0.701358198903186,0.505892296994058,1.18088118383682,1.255989822731,0.863780147452604,6.22550516883013,0.83422552858047,0.786235980452812,1.34917267430912,1.62288097110802,2.17059443777175,1.01850340712568,6.32931502391783,4.37765112292595,6.58947391651396,1.43768206527355,7.07067800570156,5.61667811606209,7.82994521636046,7.3552939543984,4.3419916922703,1.47802552133284,0,0.162964976442026,0.678980343100753,0,1.34005005953453,0.952174563544055,1.95133647857799,1.41871629695572,2.43611158613652,1.43509291791738,2.13022309130459,2.76295970985433,2.31438493730419,3.01582567878545,12.5098307278303,1.96705709207614,2.20749397043786,0.321101179975584,0.586058432961016,2.45902418065013,1.51482556322624,0.315508219416257,0,0.215423397732799,1.91175038362042,0.668396022247182,0.849229592366497,0,0.584511715822624,1.97643888973262,0.963963949265421,2.2710413633323,1.42452482933804,1.30309567482861,1.64970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,1.53717573971964,1.03371317267288,1.81766864738753,0.356497378384721,0,0,0,3.74483566329167,0,0.129358683782755,0.428674070063185,0.177340233642274,0.713475270408282,0.658196082408484,0.913394847343798,2.3467170806371,1.90648863777438,0.661585194164886,1.6488625294148,1.77610869365496,0.904693873922338,0.119372344003136,0.492422699235184,1.1659233465194,0.370850604021019,2.9048049735635,1.03193433981611,4.25947412950337,3.20226376907975,2.7338845544205,2.28778173206523,0.849892149969277,3.07893195112048,2.3493995546752,2.86401185404534,0.316335993581135,0.406638934253697,1.18805874903981,0.627264888043406,0.218362563746178,1.21377911746339,1.73572257023205,0.785267825952089,2.20345454596048,1.86401793926078,0,0.299033092087958,0.165458490457098,0.583353565032143,0.645799117388655,0.844780627453891,1.5256441023948,0.13020438484395,0.629156066554265,0.483168241652012,0.288030006257865,2.21207784439725,1.82452693761148,2.36235201479103,1.94881234466693,1.9692936523423,1.78813219303138,3.00488623799922,2.06765338044408,2.1202954489111,1.67654974641,1.71404514732629,2.14407337627455,1.92423683280659,2.57129184799452,1.58711268530648,0.221985953374065,0.0897138566094757,0,2.31827512838629,3.19060208267009,1.64836461840539,1.2862102744744,1.00314420807073,1.12950368523413,0,0,0.343706364687375,1.37016503954128,0,0.675022500231806,1.35096360967266,0,0,0,0,0.170733605754134,0.243106717068294,0.838452650511929,0.183843508450014,0.666740183404846,1.23621034343337,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.749132059759059,1.02440243847791,1.14870937911227,0.476293691283074,0.811190281613988,1.15745532278223,1.64834360321323,0.588795680537589,1.71434626192708,0.532427418478012,0.238436189947321,0.872078499793971,0.846984423737976,0.930760686808441,0.548783918618318,0.526139422875686,1.08643291076689,0,0.711810108745045,1.18205378850676,0,0.309873682371932,0.964533054905707,0.249810577937946,0.935726433781634,0.859484216193193,1.53030665655075,0.441182838239031,1.15933917810211 | |phase1_expression=0.640595388419176,0.697950815278722,3.18499467572675,0,0,1.17515490338323,1.63528848416868,1.42035655785734,0.703943610758334,0.936258105287974,0,0.398860794976682,1.54080656938085,2.44777126773193,1.66554880907831,3.44207954562704,2.09868563438444,0.473193248037357,0.411343300817216,0.42438965179803,0.850432901510698,2.08510997521859,0.783599367416806,0.47997726838022,0.45881856213434,0.57423196411502,1.7230479846363,2.15471232685889,1.71021077510736,2.01624103807945,1.99557459589774,0,0,0,0.288851619751275,2.32728503501889,0.816677425049476,5.02237956884289,1.5626706890476,6.28228492768558,1.76469446409304,2.04913645487534,4.36959317728038,3.65100772129174,3.14268486780495,1.46837401729345,0.782391344348039,0.65407546914134,0.878744730937887,0.58328969722285,1.1198913730029,0,0,0,1.34437519656986,2.05807548828758,1.14613375975503,1.54701627683233,0,0,0,0,0.889294796111139,0.449949858640699,4.94433181283487,0.7104801149461,1.19840044207362,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.127687338085188,0.307213066512487,0,0,0,0,0.56276261003168,0.30559649555362,0,0.284743361598206,0.186399445825301,2.12033341332915,3.24957708459178,2.31891590961342,4.30211938490693,3.39985666853875,5.39703191637817,7.14754059192436,4.03224198387602,1.40444420131752,2.04516387093669,1.81850203222008,0.35333957451034,0.281686839553361,0,2.54805239706646,0,0.649473123033642,0.253359865475099,0.505524445014783,3.08296475241462,1.29468941823586,2.82040064223167,0.520455980298408,0.913396434936424,0.230615497256059,3.91878865436819,3.41007250693544,3.51866455723091,1.97755974187499,1.59059292611903,3.5384422077995,0.970601099684455,1.54589062922275,1.45462575940567,0,0.878342391034642,0.628340120440365,1.78819938646014,1.07833612055328,1.19980546198682,1.14363204365758,0.149790639404823,2.74500361691176,0,0.521472960576829,0.767146371990992,0.83115217823824,0.648965052271031,1.2220723662038,1.8661045591514,0.505445516867349,1.68353484709179,0.260240885925407,0,0.180062129805349,0.60281927134286,0.204109497453984,0.2562274405697,0.187403449119458,0.776110112217047,0,0.378212160335639,0,0.219195732427575,0.278047249225598,0.696504333044333,0.411564272815887,0.796137067273973,2.1066395619397,2.57347907114715,0,0,0,0.540186184383045,0.23674473558521,0.196764231747404,0.771335564436891,0.930135779001631,0.268273401399619,1.16765342367169,0.658239399653922,0.820837320395476,1.54030738137126,0.584799949701329,3.73235195994786,2.01309628140558,0.210289948564127,0.411618449517138,0,2.90895623329899,0.426576501070468,0.696710015581316,0.515469845288373,1.21010114774006,1.33426826306922,0.760902504450237,0.949058123089023,1.4822905925161,1.25667604400135,1.79060824837036,1.55971269695296,1.79763881730844,2.16138049874694,0.995706366271836,0.379335801906163,0.342745537829186,0,0.407302655690628,1.93952487167626,0.701358198903186,0.505892296994058,1.18088118383682,1.255989822731,0.863780147452604,6.22550516883013,0.83422552858047,0.786235980452812,1.34917267430912,1.62288097110802,2.17059443777175,1.01850340712568,6.32931502391783,4.37765112292595,6.58947391651396,1.43768206527355,7.07067800570156,5.61667811606209,7.82994521636046,7.3552939543984,4.3419916922703,1.47802552133284,0,0.162964976442026,0.678980343100753,0,1.34005005953453,0.952174563544055,1.95133647857799,1.41871629695572,2.43611158613652,1.43509291791738,2.13022309130459,2.76295970985433,2.31438493730419,3.01582567878545,12.5098307278303,1.96705709207614,2.20749397043786,0.321101179975584,0.586058432961016,2.45902418065013,1.51482556322624,0.315508219416257,0,0.215423397732799,1.91175038362042,0.668396022247182,0.849229592366497,0,0.584511715822624,1.97643888973262,0.963963949265421,2.2710413633323,1.42452482933804,1.30309567482861,1.64970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,1.53717573971964,1.03371317267288,1.81766864738753,0.356497378384721,0,0,0,3.74483566329167,0,0.129358683782755,0.428674070063185,0.177340233642274,0.713475270408282,0.658196082408484,0.913394847343798,2.3467170806371,1.90648863777438,0.661585194164886,1.6488625294148,1.77610869365496,0.904693873922338,0.119372344003136,0.492422699235184,1.1659233465194,0.370850604021019,2.9048049735635,1.03193433981611,4.25947412950337,3.20226376907975,2.7338845544205,2.28778173206523,0.849892149969277,3.07893195112048,2.3493995546752,2.86401185404534,0.316335993581135,0.406638934253697,1.18805874903981,0.627264888043406,0.218362563746178,1.21377911746339,1.73572257023205,0.785267825952089,2.20345454596048,1.86401793926078,0,0.299033092087958,0.165458490457098,0.583353565032143,0.645799117388655,0.844780627453891,1.5256441023948,0.13020438484395,0.629156066554265,0.483168241652012,0.288030006257865,2.21207784439725,1.82452693761148,2.36235201479103,1.94881234466693,1.9692936523423,1.78813219303138,3.00488623799922,2.06765338044408,2.1202954489111,1.67654974641,1.71404514732629,2.14407337627455,1.92423683280659,2.57129184799452,1.58711268530648,0.221985953374065,0.0897138566094757,0,2.31827512838629,3.19060208267009,1.64836461840539,1.2862102744744,1.00314420807073,1.12950368523413,0,0,0.343706364687375,1.37016503954128,0,0.675022500231806,1.35096360967266,0,0,0,0,0.170733605754134,0.243106717068294,0.838452650511929,0.183843508450014,0.666740183404846,1.23621034343337,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.749132059759059,1.02440243847791,1.14870937911227,0.476293691283074,0.811190281613988,1.15745532278223,1.64834360321323,0.588795680537589,1.71434626192708,0.532427418478012,0.238436189947321,0.872078499793971,0.846984423737976,0.930760686808441,0.548783918618318,0.526139422875686,1.08643291076689,0,0.711810108745045,1.18205378850676,0,0.309873682371932,0.964533054905707,0.249810577937946,0.935726433781634,0.859484216193193,1.53030665655075,0.441182838239031,1.15933917810211 | ||
|short_description=p3@Irgm1 | |short_description=p3@Irgm1 | ||
}} | }} |
Latest revision as of 14:04, 1 October 2015
Short description: | p3@Irgm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Irgm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1279 |
Association with transcript: | 0bp_to_ENSMUST00000097271_5end |
EntrezGene: | Irgm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data