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FFCP PHASE1:Mm9::chr3:135101507..135101548,+: Difference between revisions

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{{FFCP|EntrezGene=66105|HGNC=|UniProt=|association_with_transcript=63bp_to_uc008rlo.1_5end|description=CAGE_peak_2_at_Ube2d3_5end|id=chr3:135101507..135101548,+|ontology_enrichment_celltype=CL:0000223!1.05e-08!20;CL:0000066!2.16e-08!25|ontology_enrichment_celltype_v019_2=CL:0000223,1.05e-08,20;CL:0000066,2.16e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.74e-15!130;UBERON:0000925!5.74e-15!130;UBERON:0006595!5.74e-15!130;UBERON:0001007!2.59e-14!128;UBERON:0001555!2.59e-14!128;UBERON:0007026!2.59e-14!128;UBERON:0004921!2.59e-13!126;UBERON:0004185!2.59e-13!126;UBERON:0003929!9.33e-11!55;UBERON:0000490!2.06e-10!66;UBERON:0003914!8.05e-10!47;UBERON:0000160!1.79e-07!43;UBERON:0009854!2.51e-07!23;UBERON:0009856!2.51e-07!23;UBERON:0005911!2.71e-07!69;UBERON:0000344!3.03e-07!15;UBERON:0002107!4.03e-07!22;UBERON:0007499!4.03e-07!22;UBERON:0006925!4.03e-07!22;UBERON:0009497!4.03e-07!22;UBERON:0000015!4.03e-07!22;UBERON:0002423!4.03e-07!22;UBERON:0006235!4.03e-07!22;UBERON:0008835!4.03e-07!22;UBERON:0003894!4.03e-07!22;UBERON:0004161!4.03e-07!22;UBERON:0008836!4.03e-07!22;UBERON:0002365!5.79e-07!25;UBERON:0002330!5.79e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.25e-17,118;UBERON:0000925,8.25e-17,118;UBERON:0006595,8.25e-17,118;UBERON:0001007,3.98e-16,116;UBERON:0001555,3.98e-16,116;UBERON:0007026,3.98e-16,116;UBERON:0004921,4.64e-15,114;UBERON:0000160,5.99e-11,31;UBERON:0003929,9.33e-11,55;UBERON:0000490,2.06e-10,66;UBERON:0003914,8.05e-10,47;UBERON:0005409,4.55e-08,47;UBERON:0009854,2.51e-07,23;UBERON:0009856,2.51e-07,23;UBERON:0005911,2.71e-07,69;UBERON:0000344,3.03e-07,15;UBERON:0002107,4.03e-07,22;UBERON:0007499,4.03e-07,22;UBERON:0006925,4.03e-07,22;UBERON:0009497,4.03e-07,22;UBERON:0000015,4.03e-07,22;UBERON:0002423,4.03e-07,22;UBERON:0006235,4.03e-07,22;UBERON:0008835,4.03e-07,22;UBERON:0003894,4.03e-07,22;UBERON:0004161,4.03e-07,22;UBERON:0008836,4.03e-07,22;UBERON:0002365,5.79e-07,25;UBERON:0002330,5.79e-07,25|phase1_expression=13.6126520039075,178.675408711353,170.169715531686,87.7146212789807,97.6746673395377,74.706276000791,72.6535312252085,39.8991069434471,246.239475043265,182.336266004833,145.535272991679,125.082745304687,33.8977445263787,34.705899760342,17.9879271380458,15.9955461237963,12.5921138063066,17.6658812600613,19.1960207048034,16.9755860719212,23.5569913718463,27.1064296778417,32.9111734315059,96.9554082128044,85.7990711191216,141.83529513641,121.905644913018,134.669520428681,74.2991570074422,73.0887376303799,100.000460305542,22.2260735710871,20.2971379902908,63.3926724061755,26.285497397366,35.2417448160004,29.6045566580435,38.0863783970586,28.1280724028568,37.1701858221397,43.5291301142951,31.4200923080885,41.2683800076481,30.3411331321141,28.0814099478055,34.5067894063961,20.342174953049,14.3896603211095,22.4079906389161,23.9148775861369,21.6978953519312,15.8127820801469,42.616781938665,44.9724528047034,39.9951620979532,78.9786468630357,43.553082870691,59.8179627041833,11.7343547298567,7.40587370980846,6.33831403506179,36.9340539955354,29.3467282716676,35.0960889739746,21.7550599764734,24.1563239081674,27.2636100571748,15.3687322128622,9.64313394468842,5.67024940993101,7.36137364729837,19.9955689082663,16.7860091123226,8.57435594504678,8.14686503655009,8.27296907949019,14.3150645299205,24.2605942361857,25.9595041203051,10.6827893061457,13.3571959659518,12.5019208933622,24.5681039121215,16.8828783009504,17.8773949898868,21.2132581541041,20.9286370774681,16.0303523409758,87.9938366531599,53.3535214353906,40.0012994408315,71.4151817894551,104.035614057286,107.940638327563,142.950811838487,106.630399129166,52.2453242890117,29.9957367737382,37.4091846628131,33.5672595784823,15.4927761754349,43.6310023208681,48.4129955442627,63.9960032837998,67.9781868775212,73.9810807187288,57.6297867316853,65.4273630790214,93.7355138802762,36.2198819318172,30.3599321840738,29.8376168745898,40.1270965225542,33.7618714837875,28.2212897125692,35.6893119376278,56.854842578906,60.0087331217633,25.6537060065464,25.2356285917958,23.6300424752621,25.6983884161668,42.8701050801681,21.6657789788545,12.7762491156208,65.3970061333994,33.1887894881399,31.7948447426506,38.6293490302117,29.9581278809645,17.8425235099264,10.178002521142,15.1227158567281,12.5300574091862,25.1423533917068,17.5220564113178,16.7016556714519,15.5508713262616,15.9215337813215,26.9365575534687,25.5036068206899,20.2313851901456,20.8872070574205,16.4268251440929,14.1515918234762,13.0675994690547,12.9308379892426,15.0047955028629,37.5088307703145,29.311442426012,27.2724242454121,25.6459006940263,26.6925359256574,31.6909471535172,27.1632420058485,26.4715574868596,30.8973802417823,29.0803135039628,21.0280989552739,47.0175503655589,44.5599513964083,44.4753291808707,45.6917339679456,35.4175617145327,37.1783742058582,48.3670605080848,47.4843920477326,35.146368052518,45.0893988762936,54.6677655383387,56.180685015278,54.6787952970743,72.0124378154646,51.5352648039828,21.65986470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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=66105
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=63bp_to_uc008rlo.1_5end
|cluster_id=chr3:135101507..135101548,+
|description=CAGE_peak_2_at_Ube2d3_5end
|id=chr3:135101507..135101548,+
|ontology_enrichment_celltype=CL:0000223!1.05e-08!20;CL:0000066!2.16e-08!25
|ontology_enrichment_celltype_v019_2=CL:0000223,1.05e-08,20;CL:0000066,2.16e-08,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!5.74e-15!130;UBERON:0000925!5.74e-15!130;UBERON:0006595!5.74e-15!130;UBERON:0001007!2.59e-14!128;UBERON:0001555!2.59e-14!128;UBERON:0007026!2.59e-14!128;UBERON:0004921!2.59e-13!126;UBERON:0004185!2.59e-13!126;UBERON:0003929!9.33e-11!55;UBERON:0000490!2.06e-10!66;UBERON:0003914!8.05e-10!47;UBERON:0000160!1.79e-07!43;UBERON:0009854!2.51e-07!23;UBERON:0009856!2.51e-07!23;UBERON:0005911!2.71e-07!69;UBERON:0000344!3.03e-07!15;UBERON:0002107!4.03e-07!22;UBERON:0007499!4.03e-07!22;UBERON:0006925!4.03e-07!22;UBERON:0009497!4.03e-07!22;UBERON:0000015!4.03e-07!22;UBERON:0002423!4.03e-07!22;UBERON:0006235!4.03e-07!22;UBERON:0008835!4.03e-07!22;UBERON:0003894!4.03e-07!22;UBERON:0004161!4.03e-07!22;UBERON:0008836!4.03e-07!22;UBERON:0002365!5.79e-07!25;UBERON:0002330!5.79e-07!25
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.25e-17,118;UBERON:0000925,8.25e-17,118;UBERON:0006595,8.25e-17,118;UBERON:0001007,3.98e-16,116;UBERON:0001555,3.98e-16,116;UBERON:0007026,3.98e-16,116;UBERON:0004921,4.64e-15,114;UBERON:0000160,5.99e-11,31;UBERON:0003929,9.33e-11,55;UBERON:0000490,2.06e-10,66;UBERON:0003914,8.05e-10,47;UBERON:0005409,4.55e-08,47;UBERON:0009854,2.51e-07,23;UBERON:0009856,2.51e-07,23;UBERON:0005911,2.71e-07,69;UBERON:0000344,3.03e-07,15;UBERON:0002107,4.03e-07,22;UBERON:0007499,4.03e-07,22;UBERON:0006925,4.03e-07,22;UBERON:0009497,4.03e-07,22;UBERON:0000015,4.03e-07,22;UBERON:0002423,4.03e-07,22;UBERON:0006235,4.03e-07,22;UBERON:0008835,4.03e-07,22;UBERON:0003894,4.03e-07,22;UBERON:0004161,4.03e-07,22;UBERON:0008836,4.03e-07,22;UBERON:0002365,5.79e-07,25;UBERON:0002330,5.79e-07,25
|phase1_expression=13.6126520039075,178.675408711353,170.169715531686,87.7146212789807,97.6746673395377,74.706276000791,72.6535312252085,39.8991069434471,246.239475043265,182.336266004833,145.535272991679,125.082745304687,33.8977445263787,34.705899760342,17.9879271380458,15.9955461237963,12.5921138063066,17.6658812600613,19.1960207048034,16.9755860719212,23.5569913718463,27.1064296778417,32.9111734315059,96.9554082128044,85.7990711191216,141.83529513641,121.905644913018,134.669520428681,74.2991570074422,73.0887376303799,100.000460305542,22.2260735710871,20.2971379902908,63.3926724061755,26.285497397366,35.2417448160004,29.6045566580435,38.0863783970586,28.1280724028568,37.1701858221397,43.5291301142951,31.4200923080885,41.2683800076481,30.3411331321141,28.0814099478055,34.5067894063961,20.342174953049,14.3896603211095,22.4079906389161,23.9148775861369,21.6978953519312,15.8127820801469,42.616781938665,44.9724528047034,39.9951620979532,78.9786468630357,43.553082870691,59.8179627041833,11.7343547298567,7.40587370980846,6.33831403506179,36.9340539955354,29.3467282716676,35.0960889739746,21.7550599764734,24.1563239081674,27.2636100571748,15.3687322128622,9.64313394468842,5.67024940993101,7.36137364729837,19.9955689082663,16.7860091123226,8.57435594504678,8.14686503655009,8.27296907949019,14.3150645299205,24.2605942361857,25.9595041203051,10.6827893061457,13.3571959659518,12.5019208933622,24.5681039121215,16.8828783009504,17.8773949898868,21.2132581541041,20.9286370774681,16.0303523409758,87.9938366531599,53.3535214353906,40.0012994408315,71.4151817894551,104.035614057286,107.940638327563,142.950811838487,106.630399129166,52.2453242890117,29.9957367737382,37.4091846628131,33.5672595784823,15.4927761754349,43.6310023208681,48.4129955442627,63.9960032837998,67.9781868775212,73.9810807187288,57.6297867316853,65.4273630790214,93.7355138802762,36.2198819318172,30.3599321840738,29.8376168745898,40.1270965225542,33.7618714837875,28.2212897125692,35.6893119376278,56.854842578906,60.0087331217633,25.6537060065464,25.2356285917958,23.6300424752621,25.6983884161668,42.8701050801681,21.6657789788545,12.7762491156208,65.3970061333994,33.1887894881399,31.7948447426506,38.6293490302117,29.9581278809645,17.8425235099264,10.178002521142,15.1227158567281,12.5300574091862,25.1423533917068,17.5220564113178,16.7016556714519,15.5508713262616,15.9215337813215,26.9365575534687,25.5036068206899,20.2313851901456,20.8872070574205,16.4268251440929,14.1515918234762,13.0675994690547,12.9308379892426,15.0047955028629,37.5088307703145,29.311442426012,27.2724242454121,25.6459006940263,26.6925359256574,31.6909471535172,27.1632420058485,26.4715574868596,30.8973802417823,29.0803135039628,21.0280989552739,47.0175503655589,44.5599513964083,44.4753291808707,45.6917339679456,35.4175617145327,37.1783742058582,48.3670605080848,47.4843920477326,35.146368052518,45.0893988762936,54.6677655383387,56.180685015278,54.6787952970743,72.0124378154646,51.5352648039828,21.6598647021051,8.84979666461846,150.340546257628,81.4507745323716,36.0457143404545,30.6552406855779,34.9230820182873,48.4040459096022,56.9287792242868,65.6278410088329,59.7906617546085,45.951008367999,37.9516165288407,36.8069473276129,44.2568477760403,67.4114556490666,77.5935599050152,58.3483930635296,51.2103332573321,30.1616073289684,39.4477074855781,29.1221398818799,27.1533482034676,25.8099817196372,29.1520436142826,56.2394663802284,55.8915471115294,51.333220191469,91.3074091428419,35.2043173060958,36.9530910812822,37.3271106558857,32.660479543549,30.3883221288045,31.3189797691146,34.2358403566465,33.0755862621072,60.4035109013779,43.1304619582064,54.3325783596015,53.982517448819,70.4695069472442,80.7288360848605,67.5420929908714,31.4080423283228,31.8345571774414,35.3633998879196,25.292017780503,19.2446003596572,26.4659886758069,24.7565386521454,23.2209040950781,24.5910824805658,18.1601045511995,25.9911272911704,28.3483534458227,28.4930220078728,20.6848153771562,39.2057338242108,45.6880774407716,54.094070032094,32.8364728102632,25.6880943980467,25.3177243039159,42.2952159071823,35.0934588814078,31.8663301610419,32.7968545209176,29.0821586939279,31.5438813297369,30.7462170233704,29.4399592020386,38.8618273607899,31.2713767965104,33.994748903401,21.5285282002611,27.1105562747793,14.2452482933804,16.6144698540648,30.8494129958641,37.1686387351896,26.220308704738,27.2091201268276,32.4400737180145,28.3489817165542,25.8245524272899,28.9439688348408,15.9954840970102,19.6073558111597,34.1319698570681,30.5713964867496,24.7525303795648,21.1072555567349,20.887086907632,17.4634223106719,19.9333442579381,19.1527452333655,15.161349496176,18.2649412868354,11.5696680663548,64.5347197175203,38.7652689680791,42.3414524265527,35.1207718765353,28.9021323785671,39.6255916777984,26.6200327126994,40.0503795377949,54.7983972864119,30.4097495297236,25.1180194772843,23.7344898157706,27.593984578087,17.1415295874269,19.9573572472697,21.5051482814131,51.3334858581443,42.1253871494211,52.7923899932899,58.2349076989219,33.0571113292286,30.2946006019005,30.8895274750352,35.3359220264452,33.191109689419,30.8839353221239,30.1685113397476,39.2633912976044,46.920620331629,26.0962511496509,10.1464728963154,33.7907394059392,23.9914811162792,17.6950581393083,19.2448136981819,17.7403931765317,15.6085127398853,22.9159717325352,25.5856800398734,13.2871266454303,10.3690802252832,37.289312234125,33.4496605228771,36.4623897935137,36.2479096108048,30.4345382634718,39.5375896014717,26.2026079953532,29.3902159077409,27.6648072857924,21.3379058634,24.6015891733891,32.5509321670773,25.7847735596083,21.7391038057718,64.6181593303352,65.4858562453491,60.1082839283487,89.986154371146,36.7060228661162,51.4249982736239,44.1395414484109,71.1703018542499,21.0660283694853,11.8597886949584,13.3494318587081,16.0410743763031,11.1704568523397,19.8673930733486,6.7985450765073,16.2005400055633,16.6618845192962,14.0474146785103,15.0150490408028,36.5331463496302,26.3356416444681,24.7563728343495,36.2229008431758,33.5381060204772,30.3341788942523,25.3361269693841,21.8397160673228,23.7480215097943,25.2697211763797,25.347929989024,29.4257092562279,28.8415843007238,27.2747149244743,26.7074930643602,26.1961530205691,29.2028501381036,30.093838392338,27.6097553538215,24.2878218221756,24.6865861717499,27.863701567016,25.0357999444687,25.2902764940252,22.5862512996793,22.1690272676192,22.6830686362238,27.8853894124113,26.6176063137889,15.7119836064167,25.7437989329458,26.399201276651,27.8277109355389,28.1985050958458,27.3927387593221,16.7373087218424,26.4342717543311,25.9993975398441,25.4413481651562,24.0444646840272,27.5922724388302
|short_description=p2@Ube2d3
}}

Latest revision as of 15:50, 1 October 2015

Short description:p2@Ube2d3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ube2d3_5end
Coexpression cluster:NA
Association with transcript: 63bp_to_uc008rlo.1_5end
EntrezGene:Ube2d3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ube2d3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5178.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6170.17
CD326+ enterocyte, pool1.CNhs13542.11848-124I387.71
CD326+ enterocyte, pool2.CNhs13197.11849-124I497.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I774.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I872.65
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E939.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7246.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2182.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6145.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1125.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E433.90
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E834.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A117.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.67
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.20
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H227.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I932.91
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D196.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D285.80
GP2+ M cell, pool1.CNhs13228.11845-124H9141.84
GP2+ M cell, pool2.CNhs13231.11846-124I1121.91
GP2+ M cell, pool3.CNhs13240.11847-124I2134.67
Ileum epithelium, pool1.CNhs13199.10252-104B974.30
Ileum epithelium, pool2.CNhs13232.10253-104C173.09
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8100.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I322.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F526.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F635.24
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F729.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G838.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H337.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G943.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H231.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H441.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D830.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D928.08
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B334.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B720.34
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.39
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B822.41
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C323.91
Mouse Astrocytes, donor2.CNhs12078.11552-120C421.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A242.62
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I944.97
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A140.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C178.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E143.55
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C559.82
Mouse Granule cells, donor1.CNhs12131.11713-123C311.73
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C636.93
Mouse Meningeal cells, donor3.CNhs12109.11639-122D129.35
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C735.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E721.76
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D224.16
Mouse Microglia, donor1.CNhs12629.11718-123C827.26
Mouse Microglia, donor2.CNhs12634.11736-123E815.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.79
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.96
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.68
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.36
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.21
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.93
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.03
Mouse Schwann, donor1.CNhs12507.11728-123D987.99
Mouse Schwann, donor2.CNhs12573.11746-123F953.35
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G340.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F771.42
Mouse hepatocyte, donor1.CNhs13078.11714-123C4104.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C8107.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F4142.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F6106.63
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A752.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I730.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E337.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I833.57
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H143.63
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I848.41
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G167.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G273.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G357.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B665.43
accessory axillary lymph node, adult.CNhs10475.1063-29H993.74
adrenal gland, adult.CNhs10508.49-24D736.22
adrenal gland, embryo E14.CNhs11038.406-44C530.36
adrenal gland, embryo E16.CNhs11004.1254-43D629.84
adrenal gland, embryo E17.CNhs11043.1263-45I140.13
adrenal gland, embryo E18.CNhs11026.1262-18F533.76
adrenal gland, neonate N00.CNhs11191.1311-23C128.22
adrenal gland, neonate N25.CNhs11223.1377-27I335.69
amnion, adult pregnant day17.5.CNhs10488.583-22A856.85
aorta, adult.CNhs10498.46-23H160.01
bone (os femoris), adult.CNhs10483.56-12G225.65
bone (os femoris), neonate N02.CNhs11227.1985-43F525.24
bone (os femoris), neonate N16.CNhs11225.1525-43A623.63
bone (os femoris), neonate N20.CNhs11195.1350-25C325.70
cecum, adult.CNhs10467.37-13H442.87
cerebellum, adult.CNhs10494.15-8B221.67
cerebellum, neonate N30.CNhs11135.1395-42I212.78
colon, adult.CNhs10468.36-18H765.40
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C733.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D131.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D438.63
corpora quadrigemina, adult.CNhs10501.16-22A429.96
corpus striatum, adult.CNhs10487.19-21D817.84
corpus striatum, neonate N00.CNhs11226.630-43F110.18
cortex, adult.CNhs10473.12-14D515.12
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F225.14
diencephalon, neonate N30.CNhs11201.1388-42B217.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.55
epididymis, adult.CNhs10490.58-23B215.92
eyeball, adult.CNhs10484.31-12G426.94
eyeball, embryo E12.CNhs11016.345-16C625.50
eyeball, embryo E14.CNhs10521.399-16E220.23
eyeball, embryo E15.CNhs10593.426-16C920.89
eyeball, embryo E17.CNhs11023.1261-18D416.43
eyeball, neonate N00.CNhs11207.633-15C614.15
eyeball, neonate N01.CNhs11140.1532-43E713.07
eyeball, neonate N02.CNhs11205.1551-44G812.93
eyeball, neonate N16.CNhs11188.777-19A215.00
forelimb, embryo E11.CNhs10596.335-25E237.51
forelimb, embryo E12.CNhs10600.359-14H229.31
forelimb, embryo E13.CNhs10589.384-1E227.27
forelimb, embryo E14.CNhs10577.413-26A825.65
forelimb, embryo E15.CNhs11007.437-20E726.69
forelimb, embryo E17.CNhs10598.1517-43C431.69
forelimb, embryo E18.CNhs11008.1520-43B527.16
gonad, embryo E13.CNhs11044.1564-45I626.47
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C830.90
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D229.08
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D521.03
heart, embryo E11.CNhs10586.331-24E947.02
heart, embryo E12.CNhs11015.353-12F544.56
heart, embryo E13.CNhs11013.376-3I944.48
heart, embryo E14.CNhs10597.403-26D445.69
heart, embryo E15.CNhs11017.431-16C835.42
heart, embryo E16.CNhs11021.457-17C637.18
heart, embryo E17.CNhs11025.479-18E548.37
heart, embryo E18.CNhs11030.1283-20G347.48
heart, neonate N00.CNhs11213.639-21E335.15
heart, neonate N03.CNhs11221.1349-25I245.09
heart, neonate N10.CNhs11118.749-24G154.67
heart, neonate N16.CNhs11209.782-15G156.18
heart, neonate N20.CNhs11127.821-26I654.68
heart, neonate N25.CNhs11196.1351-25D372.01
heart, neonate N30.CNhs11202.1390-42D251.54
hippocampus, adult.CNhs10478.13-16E821.66
hippocampus, neonate N00.CNhs11228.627-43G18.85
intestinal mucosa, adult.CNhs10506.860-29I3150.34
intestine, adult.CNhs10496.178-9A381.45
intestine, embryo E12.CNhs11019.1251-16I536.05
intestine, embryo E13.CNhs11010.381-16D530.66
intestine, embryo E15.CNhs10602.976-16D834.92
intestine, embryo E16.CNhs10585.463-22H448.40
intestine, embryo E17.CNhs10582.482-18D356.93
intestine, embryo E18.CNhs10526.1289-20F765.63
intestine, neonate N00.CNhs11126.644-26D159.79
intestine, neonate N01.CNhs11192.1322-23E945.95
intestine, neonate N06.CNhs11102.688-20B837.95
intestine, neonate N07.CNhs11095.720-20F236.81
intestine, neonate N10.CNhs11098.755-23A544.26
intestine, neonate N20.CNhs11187.827-18D167.41
intestine, neonate N25.CNhs11121.1352-25E377.59
intestine, neonate N30.CNhs11131.1384-42G158.35
kidney, embryo E14.CNhs10606.411-4I951.21
kidney, embryo E15.CNhs10997.434-16F830.16
kidney, embryo E16.CNhs10584.464-22A539.45
kidney, embryo E17.CNhs11028.483-18I229.12
kidney, embryo E18.CNhs11001.1288-20C727.15
kidney, neonate N00.CNhs11214.646-21G725.81
kidney, neonate N10.CNhs11206.758-6D529.15
kidney, neonate N20.CNhs11113.832-19I156.24
kidney, neonate N25.CNhs11122.1353-25F355.89
kidney, neonate N30.CNhs11203.1385-42H151.33
liver, adult pregnant day01.CNhs10466.508-5B291.31
liver, embryo E12.CNhs10601.355-15F835.20
liver, embryo E13.CNhs10524.378-3H636.95
liver, embryo E14.CNhs10594.409-16E137.33
liver, embryo E15.CNhs10520.433-16D732.66
liver, embryo E16.CNhs10523.462-17F530.39
liver, embryo E17.CNhs10510.481-18A331.32
liver, embryo E18.CNhs10579.499-43G434.24
liver, neonate N00.CNhs11117.641-24F433.08
liver, neonate N03.CNhs11123.1345-25G260.40
liver, neonate N06.CNhs11101.684-20A843.13
liver, neonate N07.CNhs11103.716-20H254.33
liver, neonate N10.CNhs11115.751-24B953.98
liver, neonate N20.CNhs11220.823-25A370.47
liver, neonate N25.CNhs11198.1368-26H180.73
liver, neonate N30.CNhs11106.1382-42D167.54
lung, adult.CNhs10474.28-22B131.41
lung, embryo E12.CNhs10522.354-16G231.83
lung, embryo E14.CNhs10604.404-26F835.36
lung, embryo E15.CNhs11020.432-17C525.29
lung, embryo E16.CNhs10998.458-17B619.24
lung, embryo E17.CNhs10605.480-44A626.47
lung, embryo E18.CNhs10583.1287-20I624.76
lung, neonate N00.CNhs11224.640-42C623.22
lung, neonate N06.CNhs11212.683-20E524.59
lung, neonate N07.CNhs11111.715-19A318.16
lung, neonate N10.CNhs11219.750-23E625.99
lung, neonate N20.CNhs11109.822-18A428.35
lung, neonate N25.CNhs11119.1359-25C728.49
lung, neonate N30.CNhs11133.1394-42H220.68
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A139.21
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A145.69
mammary gland, adult lactating day02.CNhs10480.595-22B654.09
mammary gland, adult pregnant day19.CNhs10476.588-5H232.84
medulla oblongata, adult.CNhs10477.17-12C225.69
medulla oblongata, neonate N30.CNhs11200.1396-42A325.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C742.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C235.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E131.87
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E232.80
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E329.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D731.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D830.75
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D929.44
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D438.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D531.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D633.99
olfactory brain, adult.CNhs10489.18-22I921.53
ovary, adult.CNhs10507.91-2I727.11
ovary, embryo E18.CNhs11040.505-44H714.25
ovary, neonate N00.CNhs11217.1299-22I416.61
oviduct, adult pregnant day01.CNhs10500.988-6G630.85
pancreas, adult.CNhs10486.34-16E437.17
pancreas, embryo E14.CNhs11012.405-44F426.22
pancreas, embryo E15.CNhs11042.1556-45F227.21
pancreas, embryo E16.CNhs11003.460-26E532.44
pancreas, embryo E17.CNhs10599.1558-45G328.35
pancreas, embryo E18.CNhs10580.1535-43I725.82
pancreas, neonate N00.CNhs11105.645-26G928.94
pancreas, neonate N01.CNhs11138.1531-43D716.00
pancreas, neonate N02.CNhs11139.1539-43D819.61
pancreas, neonate N16.CNhs11136.787-43B634.13
pancreas, neonate N25.CNhs11094.1555-45E230.57
pancreas, neonate N30.CNhs11182.1548-44H524.75
pituitary gland, adult.CNhs10493.21-1G821.11
pituitary gland, embryo E12.CNhs11018.346-16E620.89
pituitary gland, embryo E13.CNhs11009.370-44C717.46
pituitary gland, embryo E14.CNhs11037.398-44A519.93
pituitary gland, embryo E15.CNhs10592.427-16B919.15
pituitary gland, embryo E16.CNhs11036.449-43F615.16
pituitary gland, embryo E17.CNhs11039.1265-44F518.26
pituitary gland, neonate N00.CNhs11190.1308-22E911.57
placenta, adult pregnant day10.CNhs10472.539-13I764.53
placenta, adult pregnant day17.CNhs10464.577-18G338.77
prostate, adult.CNhs10470.859-1F842.34
skin, adult.CNhs10492.30-1C335.12
skin, neonate N00.CNhs11124.650-25G428.90
skin, neonate N03.CNhs11215.662-22H339.63
skin, neonate N06.CNhs11097.693-20I526.62
skin, neonate N10.CNhs11108.762-6C440.05
small intestine, neonate N16.CNhs11114.790-21I154.80
spinal cord, adult.CNhs10505.24-13C930.41
spleen, adult.CNhs10465.25-2G225.12
spleen, embryo E16.CNhs11035.461-43C123.73
spleen, embryo E18.CNhs11011.1271-21F227.59
spleen, neonate N10.CNhs11116.752-24D117.14
spleen, neonate N20.CNhs11112.824-19H119.96
spleen, neonate N25.CNhs11099.1354-25G321.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C651.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C942.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D352.79
stomach, adult.CNhs10503.33-1H658.23
stomach, embryo E12.CNhs10588.356-43E333.06
stomach, embryo E15.CNhs10603.1252-16G830.29
stomach, embryo E16.CNhs11022.459-17D430.89
stomach, embryo E17.CNhs11006.1035-18D535.34
stomach, embryo E18.CNhs10999.1286-20C633.19
stomach, neonate N03.CNhs11193.1340-24B830.88
stomach, neonate N07.CNhs11210.718-18A930.17
stomach, neonate N25.CNhs11104.1355-25E439.26
stomach, neonate N30.CNhs11134.1386-42I146.92
submandibular gland, adult.CNhs10469.59-29C126.10
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F533.79
testis, embryo E15.CNhs11034.443-27C523.99
testis, embryo E16.CNhs11033.470-26G517.70
testis, embryo E17.CNhs11029.486-18I519.24
testis, embryo E18.CNhs11027.503-18G517.74
testis, neonate N00.CNhs11189.1300-22B715.61
testis, neonate N07.CNhs11222.726-26I422.92
testis, neonate N10.CNhs11204.763-44D925.59
testis, neonate N20.CNhs11110.839-18H313.29
testis, neonate N30.CNhs11130.1391-42E210.37
thymus, adult.CNhs10471.38-12B537.29
thymus, embryo E14.CNhs11041.402-44I433.45
thymus, embryo E15.CNhs11005.430-45I236.46
thymus, embryo E16.CNhs11002.456-26C536.25
thymus, embryo E17.CNhs10581.478-18C130.43
thymus, embryo E18.CNhs10595.1273-19G439.54
thymus, neonate N02.CNhs11181.1541-43F826.20
thymus, neonate N03.CNhs11137.2104-43C729.39
thymus, neonate N06.CNhs11197.681-26C427.66
thymus, neonate N07.CNhs11211.713-19D321.34
thymus, neonate N10.CNhs11194.748-24E424.60
thymus, neonate N20.CNhs11186.820-7A232.55
thymus, neonate N25.CNhs11125.1362-25G725.78
thymus, neonate N30.CNhs11132.1393-42G221.74
tongue, adult.CNhs10499.32-1B464.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H365.49
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F760.11
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G589.99
urinary bladder, adult.CNhs10481.879-12E436.71
uterus, adult pregnant day19.CNhs10497.590-15F551.42
uterus, adult.CNhs10509.92-27E544.14
vagina, adult.CNhs10502.89-27D571.17
vesicular gland, adult.CNhs10491.51-27F821.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.02
whole body, embryo E11.CNhs11014.324-5I836.53
whole body, embryo E12.CNhs10587.857-27C926.34
whole body, embryo E13.CNhs10512.372-23H224.76
whole body, embryo E14.5.CNhs10578.420-27D236.22
whole body, embryo E14.CNhs10519.395-14B133.54
whole body, embryo E16.CNhs10514.453-14F230.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G525.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.84
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.75
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G525.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G529.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G528.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.27
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G526.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G526.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G529.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G527.61
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G524.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G527.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G525.04
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G525.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G522.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G527.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G526.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.74
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G526.40
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.20
whole body, embryo E17.5.CNhs10513.490-9F927.39
whole body, embryo E17.CNhs10517.475-3I516.74
whole body, embryo E18.CNhs10516.493-3B326.43
whole body, neonate N00.CNhs10525.657-19C226.00
whole body, neonate N01.CNhs10576.659-23C625.44
whole body, neonate N06.CNhs10515.692-21D124.04
whole body, neonate N10.CNhs10518.761-6B427.59





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
endodermal cell1.05e-0820
epithelial cell2.16e-0825

Uber anatomy
Ontology termp-valuen
endoderm-derived structure8.25e-17118
endoderm8.25e-17118
presumptive endoderm8.25e-17118
digestive system3.98e-16116
digestive tract3.98e-16116
primitive gut3.98e-16116
subdivision of digestive tract4.64e-15114
intestine5.99e-1131
gut epithelium9.33e-1155
unilaminar epithelium2.06e-1066
epithelial tube8.05e-1047
gastrointestinal system4.55e-0847
digestive tract diverticulum2.51e-0723
sac2.51e-0723
endo-epithelium2.71e-0769
mucosa3.03e-0715
liver4.03e-0722
epithelial sac4.03e-0722
digestive gland4.03e-0722
epithelium of foregut-midgut junction4.03e-0722
anatomical boundary4.03e-0722
hepatobiliary system4.03e-0722
foregut-midgut junction4.03e-0722
hepatic diverticulum4.03e-0722
liver primordium4.03e-0722
septum transversum4.03e-0722
liver bud4.03e-0722
exocrine gland5.79e-0725
exocrine system5.79e-0725
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