FFCP PHASE1:Mm9::chr3:135101507..135101548,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66105 | |EntrezGene=66105 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=63bp_to_uc008rlo.1_5end | |association_with_transcript=63bp_to_uc008rlo.1_5end | ||
|cluster_id=chr3:135101507..135101548,+ | |||
|description=CAGE_peak_2_at_Ube2d3_5end | |description=CAGE_peak_2_at_Ube2d3_5end | ||
|id=chr3:135101507..135101548,+ | |id=chr3:135101507..135101548,+ | ||
|ontology_enrichment_celltype=CL:0000223!1.05e-08!20;CL:0000066!2.16e-08!25 | |ontology_enrichment_celltype=CL:0000223!1.05e-08!20;CL:0000066!2.16e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.05e-08,20;CL:0000066,2.16e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.74e-15!130;UBERON:0000925!5.74e-15!130;UBERON:0006595!5.74e-15!130;UBERON:0001007!2.59e-14!128;UBERON:0001555!2.59e-14!128;UBERON:0007026!2.59e-14!128;UBERON:0004921!2.59e-13!126;UBERON:0004185!2.59e-13!126;UBERON:0003929!9.33e-11!55;UBERON:0000490!2.06e-10!66;UBERON:0003914!8.05e-10!47;UBERON:0000160!1.79e-07!43;UBERON:0009854!2.51e-07!23;UBERON:0009856!2.51e-07!23;UBERON:0005911!2.71e-07!69;UBERON:0000344!3.03e-07!15;UBERON:0002107!4.03e-07!22;UBERON:0007499!4.03e-07!22;UBERON:0006925!4.03e-07!22;UBERON:0009497!4.03e-07!22;UBERON:0000015!4.03e-07!22;UBERON:0002423!4.03e-07!22;UBERON:0006235!4.03e-07!22;UBERON:0008835!4.03e-07!22;UBERON:0003894!4.03e-07!22;UBERON:0004161!4.03e-07!22;UBERON:0008836!4.03e-07!22;UBERON:0002365!5.79e-07!25;UBERON:0002330!5.79e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.25e-17,118;UBERON:0000925,8.25e-17,118;UBERON:0006595,8.25e-17,118;UBERON:0001007,3.98e-16,116;UBERON:0001555,3.98e-16,116;UBERON:0007026,3.98e-16,116;UBERON:0004921,4.64e-15,114;UBERON:0000160,5.99e-11,31;UBERON:0003929,9.33e-11,55;UBERON:0000490,2.06e-10,66;UBERON:0003914,8.05e-10,47;UBERON:0005409,4.55e-08,47;UBERON:0009854,2.51e-07,23;UBERON:0009856,2.51e-07,23;UBERON:0005911,2.71e-07,69;UBERON:0000344,3.03e-07,15;UBERON:0002107,4.03e-07,22;UBERON:0007499,4.03e-07,22;UBERON:0006925,4.03e-07,22;UBERON:0009497,4.03e-07,22;UBERON:0000015,4.03e-07,22;UBERON:0002423,4.03e-07,22;UBERON:0006235,4.03e-07,22;UBERON:0008835,4.03e-07,22;UBERON:0003894,4.03e-07,22;UBERON:0004161,4.03e-07,22;UBERON:0008836,4.03e-07,22;UBERON:0002365,5.79e-07,25;UBERON:0002330,5.79e-07,25 | |||
|phase1_expression=13.6126520039075,178.675408711353,170.169715531686,87.7146212789807,97.6746673395377,74.706276000791,72.6535312252085,39.8991069434471,246.239475043265,182.336266004833,145.535272991679,125.082745304687,33.8977445263787,34.705899760342,17.9879271380458,15.9955461237963,12.5921138063066,17.6658812600613,19.1960207048034,16.9755860719212,23.5569913718463,27.1064296778417,32.9111734315059,96.9554082128044,85.7990711191216,141.83529513641,121.905644913018,134.669520428681,74.2991570074422,73.0887376303799,100.000460305542,22.2260735710871,20.2971379902908,63.3926724061755,26.285497397366,35.2417448160004,29.6045566580435,38.0863783970586,28.1280724028568,37.1701858221397,43.5291301142951,31.4200923080885,41.2683800076481,30.3411331321141,28.0814099478055,34.5067894063961,20.342174953049,14.3896603211095,22.4079906389161,23.9148775861369,21.6978953519312,15.8127820801469,42.616781938665,44.9724528047034,39.9951620979532,78.9786468630357,43.553082870691,59.8179627041833,11.7343547298567,7.40587370980846,6.33831403506179,36.9340539955354,29.3467282716676,35.0960889739746,21.7550599764734,24.1563239081674,27.2636100571748,15.3687322128622,9.64313394468842,5.67024940993101,7.36137364729837,19.9955689082663,16.7860091123226,8.57435594504678,8.14686503655009,8.27296907949019,14.3150645299205,24.2605942361857,25.9595041203051,10.6827893061457,13.3571959659518,12.5019208933622,24.5681039121215,16.8828783009504,17.8773949898868,21.2132581541041,20.9286370774681,16.0303523409758,87.9938366531599,53.3535214353906,40.0012994408315,71.4151817894551,104.035614057286,107.940638327563,142.950811838487,106.630399129166,52.2453242890117,29.9957367737382,37.4091846628131,33.5672595784823,15.4927761754349,43.6310023208681,48.4129955442627,63.9960032837998,67.9781868775212,73.9810807187288,57.6297867316853,65.4273630790214,93.7355138802762,36.2198819318172,30.3599321840738,29.8376168745898,40.1270965225542,33.7618714837875,28.2212897125692,35.6893119376278,56.854842578906,60.0087331217633,25.6537060065464,25.2356285917958,23.6300424752621,25.6983884161668,42.8701050801681,21.6657789788545,12.7762491156208,65.3970061333994,33.1887894881399,31.7948447426506,38.6293490302117,29.9581278809645,17.8425235099264,10.178002521142,15.1227158567281,12.5300574091862,25.1423533917068,17.5220564113178,16.7016556714519,15.5508713262616,15.9215337813215,26.9365575534687,25.5036068206899,20.2313851901456,20.8872070574205,16.4268251440929,14.1515918234762,13.0675994690547,12.9308379892426,15.0047955028629,37.5088307703145,29.311442426012,27.2724242454121,25.6459006940263,26.6925359256574,31.6909471535172,27.1632420058485,26.4715574868596,30.8973802417823,29.0803135039628,21.0280989552739,47.0175503655589,44.5599513964083,44.4753291808707,45.6917339679456,35.4175617145327,37.1783742058582,48.3670605080848,47.4843920477326,35.146368052518,45.0893988762936,54.6677655383387,56.180685015278,54.6787952970743,72.0124378154646,51.5352648039828,21.6598647021051,8.84979666461846,150.340546257628,81.4507745323716,36.0457143404545,30.6552406855779,34.9230820182873,48.4040459096022,56.9287792242868,65.6278410088329,59.7906617546085,45.951008367999,37.9516165288407,36.8069473276129,44.2568477760403,67.4114556490666,77.5935599050152,58.3483930635296,51.2103332573321,30.1616073289684,39.4477074855781,29.1221398818799,27.1533482034676,25.8099817196372,29.1520436142826,56.2394663802284,55.8915471115294,51.333220191469,91.3074091428419,35.2043173060958,36.9530910812822,37.3271106558857,32.660479543549,30.3883221288045,31.3189797691146,34.2358403566465,33.0755862621072,60.4035109013779,43.1304619582064,54.3325783596015,53.982517448819,70.4695069472442,80.7288360848605,67.5420929908714,31.4080423283228,31.8345571774414,35.3633998879196,25.292017780503,19.2446003596572,26.4659886758069,24.7565386521454,23.2209040950781,24.5910824805658,18.1601045511995,25.9911272911704,28.3483534458227,28.4930220078728,20.6848153771562,39.2057338242108,45.6880774407716,54.094070032094,32.8364728102632,25.6880943980467,25.3177243039159,42.2952159071823,35.0934588814078,31.8663301610419,32.7968545209176,29.0821586939279,31.5438813297369,30.7462170233704,29.4399592020386,38.8618273607899,31.2713767965104,33.994748903401,21.5285282002611,27.1105562747793,14.2452482933804,16.6144698540648,30.8494129958641,37.1686387351896,26.220308704738,27.2091201268276,32.4400737180145,28.3489817165542,25.8245524272899,28.9439688348408,15.9954840970102,19.6073558111597,34.1319698570681,30.5713964867496,24.7525303795648,21.1072555567349,20.887086907632,17.4634223106719,19.9333442579381,19.1527452333655,15.161349496176,18.2649412868354,11.5696680663548,64.5347197175203,38.7652689680791,42.3414524265527,35.1207718765353,28.9021323785671,39.6255916777984,26.6200327126994,40.0503795377949,54.7983972864119,30.4097495297236,25.1180194772843,23.7344898157706,27.593984578087,17.1415295874269,19.9573572472697,21.5051482814131,51.3334858581443,42.1253871494211,52.7923899932899,58.2349076989219,33.0571113292286,30.2946006019005,30.8895274750352,35.3359220264452,33.191109689419,30.8839353221239,30.1685113397476,39.2633912976044,46.920620331629,26.0962511496509,10.1464728963154,33.7907394059392,23.9914811162792,17.6950581393083,19.2448136981819,17.7403931765317,15.6085127398853,22.9159717325352,25.5856800398734,13.2871266454303,10.3690802252832,37.289312234125,33.4496605228771,36.4623897935137,36.2479096108048,30.4345382634718,39.5375896014717,26.2026079953532,29.3902159077409,27.6648072857924,21.3379058634,24.6015891733891,32.5509321670773,25.7847735596083,21.7391038057718,64.6181593303352,65.4858562453491,60.1082839283487,89.986154371146,36.7060228661162,51.4249982736239,44.1395414484109,71.1703018542499,21.0660283694853,11.8597886949584,13.3494318587081,16.0410743763031,11.1704568523397,19.8673930733486,6.7985450765073,16.2005400055633,16.6618845192962,14.0474146785103,15.0150490408028,36.5331463496302,26.3356416444681,24.7563728343495,36.2229008431758,33.5381060204772,30.3341788942523,25.3361269693841,21.8397160673228,23.7480215097943,25.2697211763797,25.347929989024,29.4257092562279,28.8415843007238,27.2747149244743,26.7074930643602,26.1961530205691,29.2028501381036,30.093838392338,27.6097553538215,24.2878218221756,24.6865861717499,27.863701567016,25.0357999444687,25.2902764940252,22.5862512996793,22.1690272676192,22.6830686362238,27.8853894124113,26.6176063137889,15.7119836064167,25.7437989329458,26.399201276651,27.8277109355389,28.1985050958458,27.3927387593221,16.7373087218424,26.4342717543311,25.9993975398441,25.4413481651562,24.0444646840272,27.5922724388302 | |phase1_expression=13.6126520039075,178.675408711353,170.169715531686,87.7146212789807,97.6746673395377,74.706276000791,72.6535312252085,39.8991069434471,246.239475043265,182.336266004833,145.535272991679,125.082745304687,33.8977445263787,34.705899760342,17.9879271380458,15.9955461237963,12.5921138063066,17.6658812600613,19.1960207048034,16.9755860719212,23.5569913718463,27.1064296778417,32.9111734315059,96.9554082128044,85.7990711191216,141.83529513641,121.905644913018,134.669520428681,74.2991570074422,73.0887376303799,100.000460305542,22.2260735710871,20.2971379902908,63.3926724061755,26.285497397366,35.2417448160004,29.6045566580435,38.0863783970586,28.1280724028568,37.1701858221397,43.5291301142951,31.4200923080885,41.2683800076481,30.3411331321141,28.0814099478055,34.5067894063961,20.342174953049,14.3896603211095,22.4079906389161,23.9148775861369,21.6978953519312,15.8127820801469,42.616781938665,44.9724528047034,39.9951620979532,78.9786468630357,43.553082870691,59.8179627041833,11.7343547298567,7.40587370980846,6.33831403506179,36.9340539955354,29.3467282716676,35.0960889739746,21.7550599764734,24.1563239081674,27.2636100571748,15.3687322128622,9.64313394468842,5.67024940993101,7.36137364729837,19.9955689082663,16.7860091123226,8.57435594504678,8.14686503655009,8.27296907949019,14.3150645299205,24.2605942361857,25.9595041203051,10.6827893061457,13.3571959659518,12.5019208933622,24.5681039121215,16.8828783009504,17.8773949898868,21.2132581541041,20.9286370774681,16.0303523409758,87.9938366531599,53.3535214353906,40.0012994408315,71.4151817894551,104.035614057286,107.940638327563,142.950811838487,106.630399129166,52.2453242890117,29.9957367737382,37.4091846628131,33.5672595784823,15.4927761754349,43.6310023208681,48.4129955442627,63.9960032837998,67.9781868775212,73.9810807187288,57.6297867316853,65.4273630790214,93.7355138802762,36.2198819318172,30.3599321840738,29.8376168745898,40.1270965225542,33.7618714837875,28.2212897125692,35.6893119376278,56.854842578906,60.0087331217633,25.6537060065464,25.2356285917958,23.6300424752621,25.6983884161668,42.8701050801681,21.6657789788545,12.7762491156208,65.3970061333994,33.1887894881399,31.7948447426506,38.6293490302117,29.9581278809645,17.8425235099264,10.178002521142,15.1227158567281,12.5300574091862,25.1423533917068,17.5220564113178,16.7016556714519,15.5508713262616,15.9215337813215,26.9365575534687,25.5036068206899,20.2313851901456,20.8872070574205,16.4268251440929,14.1515918234762,13.0675994690547,12.9308379892426,15.0047955028629,37.5088307703145,29.311442426012,27.2724242454121,25.6459006940263,26.6925359256574,31.6909471535172,27.1632420058485,26.4715574868596,30.8973802417823,29.0803135039628,21.0280989552739,47.0175503655589,44.5599513964083,44.4753291808707,45.6917339679456,35.4175617145327,37.1783742058582,48.3670605080848,47.4843920477326,35.146368052518,45.0893988762936,54.6677655383387,56.180685015278,54.6787952970743,72.0124378154646,51.5352648039828,21.6598647021051,8.84979666461846,150.340546257628,81.4507745323716,36.0457143404545,30.6552406855779,34.9230820182873,48.4040459096022,56.9287792242868,65.6278410088329,59.7906617546085,45.951008367999,37.9516165288407,36.8069473276129,44.2568477760403,67.4114556490666,77.5935599050152,58.3483930635296,51.2103332573321,30.1616073289684,39.4477074855781,29.1221398818799,27.1533482034676,25.8099817196372,29.1520436142826,56.2394663802284,55.8915471115294,51.333220191469,91.3074091428419,35.2043173060958,36.9530910812822,37.3271106558857,32.660479543549,30.3883221288045,31.3189797691146,34.2358403566465,33.0755862621072,60.4035109013779,43.1304619582064,54.3325783596015,53.982517448819,70.4695069472442,80.7288360848605,67.5420929908714,31.4080423283228,31.8345571774414,35.3633998879196,25.292017780503,19.2446003596572,26.4659886758069,24.7565386521454,23.2209040950781,24.5910824805658,18.1601045511995,25.9911272911704,28.3483534458227,28.4930220078728,20.6848153771562,39.2057338242108,45.6880774407716,54.094070032094,32.8364728102632,25.6880943980467,25.3177243039159,42.2952159071823,35.0934588814078,31.8663301610419,32.7968545209176,29.0821586939279,31.5438813297369,30.7462170233704,29.4399592020386,38.8618273607899,31.2713767965104,33.994748903401,21.5285282002611,27.1105562747793,14.2452482933804,16.6144698540648,30.8494129958641,37.1686387351896,26.220308704738,27.2091201268276,32.4400737180145,28.3489817165542,25.8245524272899,28.9439688348408,15.9954840970102,19.6073558111597,34.1319698570681,30.5713964867496,24.7525303795648,21.1072555567349,20.887086907632,17.4634223106719,19.9333442579381,19.1527452333655,15.161349496176,18.2649412868354,11.5696680663548,64.5347197175203,38.7652689680791,42.3414524265527,35.1207718765353,28.9021323785671,39.6255916777984,26.6200327126994,40.0503795377949,54.7983972864119,30.4097495297236,25.1180194772843,23.7344898157706,27.593984578087,17.1415295874269,19.9573572472697,21.5051482814131,51.3334858581443,42.1253871494211,52.7923899932899,58.2349076989219,33.0571113292286,30.2946006019005,30.8895274750352,35.3359220264452,33.191109689419,30.8839353221239,30.1685113397476,39.2633912976044,46.920620331629,26.0962511496509,10.1464728963154,33.7907394059392,23.9914811162792,17.6950581393083,19.2448136981819,17.7403931765317,15.6085127398853,22.9159717325352,25.5856800398734,13.2871266454303,10.3690802252832,37.289312234125,33.4496605228771,36.4623897935137,36.2479096108048,30.4345382634718,39.5375896014717,26.2026079953532,29.3902159077409,27.6648072857924,21.3379058634,24.6015891733891,32.5509321670773,25.7847735596083,21.7391038057718,64.6181593303352,65.4858562453491,60.1082839283487,89.986154371146,36.7060228661162,51.4249982736239,44.1395414484109,71.1703018542499,21.0660283694853,11.8597886949584,13.3494318587081,16.0410743763031,11.1704568523397,19.8673930733486,6.7985450765073,16.2005400055633,16.6618845192962,14.0474146785103,15.0150490408028,36.5331463496302,26.3356416444681,24.7563728343495,36.2229008431758,33.5381060204772,30.3341788942523,25.3361269693841,21.8397160673228,23.7480215097943,25.2697211763797,25.347929989024,29.4257092562279,28.8415843007238,27.2747149244743,26.7074930643602,26.1961530205691,29.2028501381036,30.093838392338,27.6097553538215,24.2878218221756,24.6865861717499,27.863701567016,25.0357999444687,25.2902764940252,22.5862512996793,22.1690272676192,22.6830686362238,27.8853894124113,26.6176063137889,15.7119836064167,25.7437989329458,26.399201276651,27.8277109355389,28.1985050958458,27.3927387593221,16.7373087218424,26.4342717543311,25.9993975398441,25.4413481651562,24.0444646840272,27.5922724388302 | ||
|short_description=p2@Ube2d3 | |short_description=p2@Ube2d3 | ||
}} | }} |
Latest revision as of 15:50, 1 October 2015
Short description: | p2@Ube2d3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ube2d3_5end |
Coexpression cluster: | NA |
Association with transcript: | 63bp_to_uc008rlo.1_5end |
EntrezGene: | Ube2d3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.05e-08 | 20 |
epithelial cell | 2.16e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.25e-17 | 118 |
endoderm | 8.25e-17 | 118 |
presumptive endoderm | 8.25e-17 | 118 |
digestive system | 3.98e-16 | 116 |
digestive tract | 3.98e-16 | 116 |
primitive gut | 3.98e-16 | 116 |
subdivision of digestive tract | 4.64e-15 | 114 |
intestine | 5.99e-11 | 31 |
gut epithelium | 9.33e-11 | 55 |
unilaminar epithelium | 2.06e-10 | 66 |
epithelial tube | 8.05e-10 | 47 |
gastrointestinal system | 4.55e-08 | 47 |
digestive tract diverticulum | 2.51e-07 | 23 |
sac | 2.51e-07 | 23 |
endo-epithelium | 2.71e-07 | 69 |
mucosa | 3.03e-07 | 15 |
liver | 4.03e-07 | 22 |
epithelial sac | 4.03e-07 | 22 |
digestive gland | 4.03e-07 | 22 |
epithelium of foregut-midgut junction | 4.03e-07 | 22 |
anatomical boundary | 4.03e-07 | 22 |
hepatobiliary system | 4.03e-07 | 22 |
foregut-midgut junction | 4.03e-07 | 22 |
hepatic diverticulum | 4.03e-07 | 22 |
liver primordium | 4.03e-07 | 22 |
septum transversum | 4.03e-07 | 22 |
liver bud | 4.03e-07 | 22 |
exocrine gland | 5.79e-07 | 25 |
exocrine system | 5.79e-07 | 25 |