FFCP PHASE1:Mm9::chr6:6813269..6813272,+: Difference between revisions
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{{FFCP|EntrezGene=13396|HGNC=|MCL_coexpression_id=1831|UniProt=P70397|association_with_transcript=-61bp_to_ENSMUST00000160937,ENSMUST00000171311,NM_010057,uc009aww.1_5end|description=CAGE_peak_2_at_Dlx6_5end|id=chr6:6813269..6813272,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002608,6.72e-08,3;CL:0002613,1.36e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002791!9.54e-15!29;UBERON:0003528!9.54e-15!29;UBERON:0001893!9.54e-15!29;UBERON:0003080!2.57e-14!40;UBERON:0002780!4.44e-14!39;UBERON:0001890!4.44e-14!39;UBERON:0006240!4.44e-14!39;UBERON:0000955!4.80e-12!50;UBERON:0006238!4.80e-12!50;UBERON:0002616!2.90e-11!49;UBERON:0002020!3.03e-11!34;UBERON:0003056!4.57e-11!49;UBERON:0000956!5.52e-10!21;UBERON:0001869!5.52e-10!21;UBERON:0000203!5.52e-10!21;UBERON:0001049!1.30e-08!52;UBERON:0005068!1.30e-08!52;UBERON:0006241!1.30e-08!52;UBERON:0007135!1.30e-08!52;UBERON:0000033!2.33e-08!63;UBERON:0002619!4.79e-08!17;UBERON:0000026!3.99e-07!13;UBERON:0004708!3.99e-07!13;UBERON:0002101!3.99e-07!13;UBERON:0004357!3.99e-07!13;UBERON:0009872!3.99e-07!13;UBERON:0004347!3.99e-07!13;UBERON:0005732!3.99e-07!13;UBERON:0005733!3.99e-07!13;UBERON:0000153!7.19e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000369,6.93e-12,5;UBERON:0002435,6.93e-12,5;UBERON:0000204,6.93e-12,5;UBERON:0010082,6.93e-12,5;UBERON:0003528,8.71e-12,29;UBERON:0002791,8.71e-12,29;UBERON:0001893,8.71e-12,29;UBERON:0002780,9.06e-11,39;UBERON:0001890,9.06e-11,39;UBERON:0006240,9.06e-11,39;UBERON:0003080,2.11e-10,40;UBERON:0002420,1.02e-09,8;UBERON:0007245,1.02e-09,8;UBERON:0010009,1.02e-09,8;UBERON:0010011,1.02e-09,8;UBERON:0000454,1.02e-09,8;UBERON:0000955,1.16e-09,47;UBERON:0006238,1.16e-09,47;UBERON:0002020,1.46e-09,34;UBERON:0002616,1.51e-08,46;UBERON:0003056,8.56e-08,49;UBERON:0001049,3.94e-07,52;UBERON:0005068,3.94e-07,52;UBERON:0006241,3.94e-07,52;UBERON:0007135,3.94e-07,52;UBERON:0000073,9.86e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,1.08004750665353,0.841299845405528,0,0,10.0442455356262,12.3640657613525,3.67687514644008,0,0.383062014255563,0.307213066512487,5.53922408466814,5.6722339033494,3.12548022334056,0,0.56276261003168,1.06958773443767,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,14.2213340630666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,1.13236794963186,1.98757366614354,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,9.15001205637253,11.1832373380449,0.521472960576829,1.53429274398198,3.74018480207208,2.10913641988085,0.101839363850316,1.11966273549084,0,0,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0.431135985865684,0.378212160335639,0.703804496655795,1.09597866213787,0.834141747676794,1.0447564995665,1.64625709126355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.720332286654991,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,12.5315313404505,0.425820255624806,0.890328018336276,0.651547837414304,3.13443233647817,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.857348140126369,0,0,0.329098041204242,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,5.6369293868419,0,0,0,0,0,0,0,0,0,3.74439008135225,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0.335769232728157,0,0.187682475451182,8.05867146775966,5.78794623513478,0,0.564751842617067,1.84130094602871,1.14579102687879,0.515559547031063,0.685082519770642,0.755393897389701,2.02506750069542,0,2.26571204492102,0.51776031175182,1.24544817101012,2.39414924040619,0.682934423016537,1.45864030240976,0.419226325255965,1.10306105070008,0.888986911206461,0.412070114477788,0.64183841918363,0.505394423527595,0.760437899670719,0.377252682772152,1.12369808963859,0.320125762024346,0.976402972245426,0.476293691283074,1.39061191133827,1.73618298417335,0.824171801606613,1.17759136107518,0.342869252385415,0.887379030796687,0.715308569841963,0.581385666529314,0.941093804153306,1.01537529470012,0.73171189149109,0.789209134313529,0.950628796921032,1.12228454331548,0.237270036248348,0.591026894253381,1.22769312950907,0.619747364743864,0.771626443924566,1.74867404556562,0.701794825336225,1.07435527024149,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p2@Dlx6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13396 | |||
|HGNC= | |||
|MCL_coexpression_id=1831 | |||
|TSSclassifier=NA | |||
|UniProt=P70397 | |||
|association_with_transcript=-61bp_to_ENSMUST00000160937,ENSMUST00000171311,NM_010057,uc009aww.1_5end | |||
|cluster_id=chr6:6813269..6813272,+ | |||
|description=CAGE_peak_2_at_Dlx6_5end | |||
|id=chr6:6813269..6813272,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,6.72e-08,3;CL:0002613,1.36e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!9.54e-15!29;UBERON:0003528!9.54e-15!29;UBERON:0001893!9.54e-15!29;UBERON:0003080!2.57e-14!40;UBERON:0002780!4.44e-14!39;UBERON:0001890!4.44e-14!39;UBERON:0006240!4.44e-14!39;UBERON:0000955!4.80e-12!50;UBERON:0006238!4.80e-12!50;UBERON:0002616!2.90e-11!49;UBERON:0002020!3.03e-11!34;UBERON:0003056!4.57e-11!49;UBERON:0000956!5.52e-10!21;UBERON:0001869!5.52e-10!21;UBERON:0000203!5.52e-10!21;UBERON:0001049!1.30e-08!52;UBERON:0005068!1.30e-08!52;UBERON:0006241!1.30e-08!52;UBERON:0007135!1.30e-08!52;UBERON:0000033!2.33e-08!63;UBERON:0002619!4.79e-08!17;UBERON:0000026!3.99e-07!13;UBERON:0004708!3.99e-07!13;UBERON:0002101!3.99e-07!13;UBERON:0004357!3.99e-07!13;UBERON:0009872!3.99e-07!13;UBERON:0004347!3.99e-07!13;UBERON:0005732!3.99e-07!13;UBERON:0005733!3.99e-07!13;UBERON:0000153!7.19e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,6.93e-12,5;UBERON:0002435,6.93e-12,5;UBERON:0000204,6.93e-12,5;UBERON:0010082,6.93e-12,5;UBERON:0003528,8.71e-12,29;UBERON:0002791,8.71e-12,29;UBERON:0001893,8.71e-12,29;UBERON:0002780,9.06e-11,39;UBERON:0001890,9.06e-11,39;UBERON:0006240,9.06e-11,39;UBERON:0003080,2.11e-10,40;UBERON:0002420,1.02e-09,8;UBERON:0007245,1.02e-09,8;UBERON:0010009,1.02e-09,8;UBERON:0010011,1.02e-09,8;UBERON:0000454,1.02e-09,8;UBERON:0000955,1.16e-09,47;UBERON:0006238,1.16e-09,47;UBERON:0002020,1.46e-09,34;UBERON:0002616,1.51e-08,46;UBERON:0003056,8.56e-08,49;UBERON:0001049,3.94e-07,52;UBERON:0005068,3.94e-07,52;UBERON:0006241,3.94e-07,52;UBERON:0007135,3.94e-07,52;UBERON:0000073,9.86e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,1.08004750665353,0.841299845405528,0,0,10.0442455356262,12.3640657613525,3.67687514644008,0,0.383062014255563,0.307213066512487,5.53922408466814,5.6722339033494,3.12548022334056,0,0.56276261003168,1.06958773443767,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,14.2213340630666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,1.13236794963186,1.98757366614354,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,9.15001205637253,11.1832373380449,0.521472960576829,1.53429274398198,3.74018480207208,2.10913641988085,0.101839363850316,1.11966273549084,0,0,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0.431135985865684,0.378212160335639,0.703804496655795,1.09597866213787,0.834141747676794,1.0447564995665,1.64625709126355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.720332286654991,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,12.5315313404505,0.425820255624806,0.890328018336276,0.651547837414304,3.13443233647817,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.857348140126369,0,0,0.329098041204242,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,5.6369293868419,0,0,0,0,0,0,0,0,0,3.74439008135225,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0.335769232728157,0,0.187682475451182,8.05867146775966,5.78794623513478,0,0.564751842617067,1.84130094602871,1.14579102687879,0.515559547031063,0.685082519770642,0.755393897389701,2.02506750069542,0,2.26571204492102,0.51776031175182,1.24544817101012,2.39414924040619,0.682934423016537,1.45864030240976,0.419226325255965,1.10306105070008,0.888986911206461,0.412070114477788,0.64183841918363,0.505394423527595,0.760437899670719,0.377252682772152,1.12369808963859,0.320125762024346,0.976402972245426,0.476293691283074,1.39061191133827,1.73618298417335,0.824171801606613,1.17759136107518,0.342869252385415,0.887379030796687,0.715308569841963,0.581385666529314,0.941093804153306,1.01537529470012,0.73171189149109,0.789209134313529,0.950628796921032,1.12228454331548,0.237270036248348,0.591026894253381,1.22769312950907,0.619747364743864,0.771626443924566,1.74867404556562,0.701794825336225,1.07435527024149,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Dlx6 | |||
}} |
Latest revision as of 15:55, 1 October 2015
Short description: | p2@Dlx6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dlx6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1831 |
Association with transcript: | -61bp_to_ENSMUST00000160937, ENSMUST00000171311, NM_010057, uc009aww.1_5end |
EntrezGene: | Dlx6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 6.72e-08 | 3 |
striatum neuron | 1.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 6.93e-12 | 5 |
striatum | 6.93e-12 | 5 |
ventral part of telencephalon | 6.93e-12 | 5 |
future corpus striatum | 6.93e-12 | 5 |
brain grey matter | 8.71e-12 | 29 |
regional part of telencephalon | 8.71e-12 | 29 |
telencephalon | 8.71e-12 | 29 |
regional part of forebrain | 9.06e-11 | 39 |
forebrain | 9.06e-11 | 39 |
future forebrain | 9.06e-11 | 39 |
anterior neural tube | 2.11e-10 | 40 |
basal ganglion | 1.02e-09 | 8 |
nuclear complex of neuraxis | 1.02e-09 | 8 |
aggregate regional part of brain | 1.02e-09 | 8 |
collection of basal ganglia | 1.02e-09 | 8 |
cerebral subcortex | 1.02e-09 | 8 |
brain | 1.16e-09 | 47 |
future brain | 1.16e-09 | 47 |
gray matter | 1.46e-09 | 34 |
regional part of brain | 1.51e-08 | 46 |
pre-chordal neural plate | 8.56e-08 | 49 |
neural tube | 3.94e-07 | 52 |
neural rod | 3.94e-07 | 52 |
future spinal cord | 3.94e-07 | 52 |
neural keel | 3.94e-07 | 52 |
regional part of nervous system | 9.86e-07 | 54 |