Personal tools

FFCP PHASE1:Mm9::chr13:58907995..58908016,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:58907995..58908016,+
|DHSsupport=NA
|short_description=p8@Ntrk2
|DPIdataset=NA
|description=CAGE_peak_8_at_Ntrk2_5end
|association_with_transcript=38bp_to_ENSMUST00000109838,NM_008745,uc007quh.1,uc007qui.1_5end
|EntrezGene=18212
|EntrezGene=18212
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P15209,Q3UHE3
|UniProt=P15209,Q3UHE3
|association_with_transcript=38bp_to_ENSMUST00000109838,NM_008745,uc007quh.1,uc007qui.1_5end
|cluster_id=chr13:58907995..58908016,+
|description=CAGE_peak_8_at_Ntrk2_5end
|id=chr13:58907995..58908016,+
|ontology_enrichment_celltype=CL:0000117!3.57e-14!23;CL:0000337!3.57e-14!23;CL:0000221!4.79e-10!44;CL:0000133!4.79e-10!44;CL:0002319!9.13e-10!43;CL:0000540!9.87e-08!33;CL:0000047!9.87e-08!33;CL:0000031!9.87e-08!33;CL:0000404!9.87e-08!33;CL:0000055!2.57e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.37e-15,23;CL:0000337,1.37e-15,23;CL:0002319,8.05e-14,43;CL:0000221,2.25e-13,44;CL:0000133,2.25e-13,44;CL:0000540,1.30e-09,33;CL:0000047,1.30e-09,33;CL:0000031,1.30e-09,33;CL:0000404,1.30e-09,33;CL:0000393,1.57e-07,39;CL:0000211,1.57e-07,39;CL:0002453,4.90e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.93e-29!63;UBERON:0001049!3.99e-29!52;UBERON:0005068!3.99e-29!52;UBERON:0006241!3.99e-29!52;UBERON:0007135!3.99e-29!52;UBERON:0000955!6.35e-28!50;UBERON:0006238!6.35e-28!50;UBERON:0001017!8.38e-28!73;UBERON:0005743!8.38e-28!73;UBERON:0000073!1.33e-27!75;UBERON:0001016!1.33e-27!75;UBERON:0002616!3.12e-27!49;UBERON:0002346!9.70e-27!71;UBERON:0003075!9.70e-27!71;UBERON:0007284!9.70e-27!71;UBERON:0004121!2.77e-25!102;UBERON:0000924!2.77e-25!102;UBERON:0006601!2.77e-25!102;UBERON:0003056!1.01e-24!49;UBERON:0003080!2.43e-22!40;UBERON:0002020!4.68e-22!34;UBERON:0002780!1.59e-21!39;UBERON:0001890!1.59e-21!39;UBERON:0006240!1.59e-21!39;UBERON:0002791!1.63e-18!29;UBERON:0003528!1.63e-18!29;UBERON:0001893!1.63e-18!29;UBERON:0000153!8.12e-18!94;UBERON:0007811!2.47e-17!86;UBERON:0000956!2.22e-13!21;UBERON:0001869!2.22e-13!21;UBERON:0000203!2.22e-13!21;UBERON:0002619!2.44e-11!17;UBERON:0000025!1.79e-09!114;UBERON:0004111!1.88e-09!122;UBERON:0002021!2.78e-08!10;UBERON:0000411!2.78e-08!10;UBERON:0001950!2.78e-08!10;UBERON:0003076!3.34e-07!12;UBERON:0003057!3.34e-07!12;UBERON:0000475!4.07e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.89e-38,73;UBERON:0000073,2.40e-37,54;UBERON:0001016,1.79e-36,75;UBERON:0001049,8.32e-34,52;UBERON:0005068,8.32e-34,52;UBERON:0006241,8.32e-34,52;UBERON:0007135,8.32e-34,52;UBERON:0004121,9.32e-31,95;UBERON:0000924,9.32e-31,95;UBERON:0006601,9.32e-31,95;UBERON:0002346,1.28e-30,64;UBERON:0003075,1.28e-30,64;UBERON:0007284,1.28e-30,64;UBERON:0002020,6.32e-29,34;UBERON:0000955,6.71e-27,47;UBERON:0006238,6.71e-27,47;UBERON:0002616,1.17e-25,46;UBERON:0010371,1.33e-25,73;UBERON:0003528,7.15e-22,29;UBERON:0002791,7.15e-22,29;UBERON:0001893,7.15e-22,29;UBERON:0003080,7.66e-22,40;UBERON:0003056,5.54e-21,49;UBERON:0002780,2.02e-20,39;UBERON:0001890,2.02e-20,39;UBERON:0006240,2.02e-20,39;UBERON:0010314,2.95e-18,92;UBERON:0002021,9.83e-14,10;UBERON:0000411,9.83e-14,10;UBERON:0001950,9.83e-14,10;UBERON:0000956,1.68e-13,21;UBERON:0001869,1.68e-13,21;UBERON:0000203,1.68e-13,21;UBERON:0002619,1.03e-12,17;UBERON:0003076,1.34e-12,12;UBERON:0003057,1.34e-12,12;UBERON:0000025,3.58e-11,114;UBERON:0004111,1.22e-10,122;UBERON:0002420,6.69e-10,8;UBERON:0007245,6.69e-10,8;UBERON:0010009,6.69e-10,8;UBERON:0010011,6.69e-10,8;UBERON:0000454,6.69e-10,8;UBERON:0002240,7.56e-10,6;UBERON:0005174,7.56e-10,6;UBERON:0001137,7.56e-10,6;UBERON:0011216,2.26e-09,194;UBERON:0001948,1.20e-08,5;UBERON:0002315,1.20e-08,5;UBERON:0002950,2.87e-08,4;UBERON:0001891,2.87e-08,4;UBERON:0009616,2.87e-08,4;UBERON:0010286,2.87e-08,4
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,1.5378032791413,1.36100929351998,1.39986421625363,0,0,0,0,0,0,0.515672092277442,1.82084814773638,0.528990979272033,1.26766280701236,0,0,0,0,0,1.79760066311043,3.45796474789399,0.933206510776299,0.675029691658453,1.26194976810829,2.28520787523043,1.76694832761291,0.61245399607477,0.862609239164127,0.919218786610021,6.60695285996332,2.17068474744819,3.5329502648936,1.05509030184155,0.731901148819277,1.04182674111352,2.23346399201105,4.50210088025344,5.19514042441154,2.65165726926301,1.85083185038834,2.23679334990361,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0.461230994512117,0.150722640552623,0,0,0,0.578397427679647,0,0.647067399789637,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,3.2953940669061,3.66000482254901,1.50785222535437,3.30266208365325,3.06858548796397,3.74018480207208,4.54275536589721,0.81471491080253,0,0,0.210441855886474,0.520481771850815,1.14951052216736,1.0803727788321,0.150704817835715,0.340182495756639,0.512454881139399,0.655912071918102,1.03481348295606,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0,1.0447564995665,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0.134206418760372,1.89260953707715,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.947457058852424,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.664394068946325,0.637819074629948,0.163863314715738,1.20879487306127,0.578596234326046,0,0,0,0,3.21101179975584,2.69586879162067,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0.141940085208269,1.24645922567079,0.977321756121456,0.824850614862677,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0,0,0,0,1.03135543248187,0.340439605753788,0.18006109403131,0.388076051348264,1.28602221018955,0.886701168211368,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0,0,1.48340241608408,0,2.27025554759545,0.925972636848558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0,0.234714477291508,0.13020438484395,0,0,0,0,0.810900861160657,0.513554785824136,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.549454872801795,1.2862102744744,0,2.25900737046827,0.920650473014354,1.71868654031819,2.06223818812425,4.11049511862385,3.0215755895588,2.70009000092722,3.60256962579376,2.71885445390523,3.10656187051092,0.518936737920883,1.59609949360412,0.170733605754134,0.243106717068294,0.419226325255965,0.735374033800057,0,0.206035057238894,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,0.187283014939765,0.192075457214608,0.287177344778066,0,0.579421629724277,0.77163688185482,0,0.147198920134397,0.685738504770831,0.532427418478012,0,0.436039249896986,0.658765662907314,0.25384382367503,0.548783918618318,0.263069711437843,0.407412341537585,0,0.355905054372522,0.591026894253381,0.409231043169689,0.77468420592983,0.385813221962283,0.749431733813838,0.467863216890817,0.859484216193193,0.382576664137687,0.441182838239031,0
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,1.5378032791413,1.36100929351998,1.39986421625363,0,0,0,0,0,0,0.515672092277442,1.82084814773638,0.528990979272033,1.26766280701236,0,0,0,0,0,1.79760066311043,3.45796474789399,0.933206510776299,0.675029691658453,1.26194976810829,2.28520787523043,1.76694832761291,0.61245399607477,0.862609239164127,0.919218786610021,6.60695285996332,2.17068474744819,3.5329502648936,1.05509030184155,0.731901148819277,1.04182674111352,2.23346399201105,4.50210088025344,5.19514042441154,2.65165726926301,1.85083185038834,2.23679334990361,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0.461230994512117,0.150722640552623,0,0,0,0.578397427679647,0,0.647067399789637,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,3.2953940669061,3.66000482254901,1.50785222535437,3.30266208365325,3.06858548796397,3.74018480207208,4.54275536589721,0.81471491080253,0,0,0.210441855886474,0.520481771850815,1.14951052216736,1.0803727788321,0.150704817835715,0.340182495756639,0.512454881139399,0.655912071918102,1.03481348295606,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0,1.0447564995665,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0.134206418760372,1.89260953707715,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.947457058852424,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.664394068946325,0.637819074629948,0.163863314715738,1.20879487306127,0.578596234326046,0,0,0,0,3.21101179975584,2.69586879162067,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0.141940085208269,1.24645922567079,0.977321756121456,0.824850614862677,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0,0,0,0,1.03135543248187,0.340439605753788,0.18006109403131,0.388076051348264,1.28602221018955,0.886701168211368,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0,0,1.48340241608408,0,2.27025554759545,0.925972636848558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0,0.234714477291508,0.13020438484395,0,0,0,0,0.810900861160657,0.513554785824136,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.549454872801795,1.2862102744744,0,2.25900737046827,0.920650473014354,1.71868654031819,2.06223818812425,4.11049511862385,3.0215755895588,2.70009000092722,3.60256962579376,2.71885445390523,3.10656187051092,0.518936737920883,1.59609949360412,0.170733605754134,0.243106717068294,0.419226325255965,0.735374033800057,0,0.206035057238894,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,0.187283014939765,0.192075457214608,0.287177344778066,0,0.579421629724277,0.77163688185482,0,0.147198920134397,0.685738504770831,0.532427418478012,0,0.436039249896986,0.658765662907314,0.25384382367503,0.548783918618318,0.263069711437843,0.407412341537585,0,0.355905054372522,0.591026894253381,0.409231043169689,0.77468420592983,0.385813221962283,0.749431733813838,0.467863216890817,0.859484216193193,0.382576664137687,0.441182838239031,0
|short_description=p8@Ntrk2
}}
}}

Latest revision as of 20:01, 1 October 2015

Short description:p8@Ntrk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Ntrk2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 38bp_to_ENSMUST00000109838, NM_008745, uc007quh.1, uc007qui.1_5end
EntrezGene:Ntrk2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Ntrk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system8.89e-3873
regional part of nervous system2.40e-3754
nervous system1.79e-3675
neural tube8.32e-3452
neural rod8.32e-3452
future spinal cord8.32e-3452
neural keel8.32e-3452
ectoderm-derived structure9.32e-3195
ectoderm9.32e-3195
presumptive ectoderm9.32e-3195
neurectoderm1.28e-3064
neural plate1.28e-3064
presumptive neural plate1.28e-3064
gray matter6.32e-2934
brain6.71e-2747
future brain6.71e-2747
regional part of brain1.17e-2546
ecto-epithelium1.33e-2573
brain grey matter7.15e-2229
regional part of telencephalon7.15e-2229
telencephalon7.15e-2229
anterior neural tube7.66e-2240
pre-chordal neural plate5.54e-2149
regional part of forebrain2.02e-2039
forebrain2.02e-2039
future forebrain2.02e-2039
structure with developmental contribution from neural crest2.95e-1892
occipital lobe9.83e-1410
visual cortex9.83e-1410
neocortex9.83e-1410
cerebral cortex1.68e-1321
cerebral hemisphere1.68e-1321
pallium1.68e-1321
regional part of cerebral cortex1.03e-1217
posterior neural tube1.34e-1212
chordal neural plate1.34e-1212
tube3.58e-11114
anatomical conduit1.22e-10122
basal ganglion6.69e-108
nuclear complex of neuraxis6.69e-108
aggregate regional part of brain6.69e-108
collection of basal ganglia6.69e-108
cerebral subcortex6.69e-108
spinal cord7.56e-106
dorsal region element7.56e-106
dorsum7.56e-106
organ system subdivision2.26e-09194
regional part of spinal cord1.20e-085
gray matter of spinal cord1.20e-085
regional part of midbrain2.87e-084
midbrain2.87e-084
presumptive midbrain2.87e-084
midbrain neural tube2.87e-084
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:58907995..58908016,%2B&oldid=4319720"