FFCP PHASE1:Mm9::chr13:67500674..67500700,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:67500674..67500700,-
|short_description=p2@Zfp429
|description=CAGE_peak_2_at_Zfp429_5end
|association_with_transcript=2bp_to_ENSMUST00000109732,NM_001080...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72807 | |EntrezGene=72807 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q7M6Y0,Q8BU41 | |UniProt=Q7M6Y0,Q8BU41 | ||
|association_with_transcript=2bp_to_ENSMUST00000109732,NM_001080941,uc007ras.1,uc011zbi.1_5end | |||
|cluster_id=chr13:67500674..67500700,- | |||
|description=CAGE_peak_2_at_Zfp429_5end | |||
|id=chr13:67500674..67500700,- | |||
|ontology_enrichment_celltype=CL:0000838!1.43e-07!12;CL:0000542!3.71e-07!13;CL:0000051!3.71e-07!13;CL:0000084!6.75e-07!11;CL:0000827!6.75e-07!11;CL:0000988!8.24e-07!32;CL:0002032!8.24e-07!32;CL:0000037!8.24e-07!32;CL:0000566!8.24e-07!32;CL:0000837!8.24e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.43e-09,12;CL:0002031,8.56e-09,25;CL:0000084,1.32e-08,11;CL:0000827,1.32e-08,11;CL:0000542,1.62e-08,13;CL:0000051,1.62e-08,13;CL:0000738,1.83e-08,17;CL:0002087,1.83e-08,17;CL:0000988,2.41e-08,32;CL:0002032,2.41e-08,32;CL:0000037,2.41e-08,32;CL:0000837,2.41e-08,32;CL:0000791,4.47e-07,9;CL:0000789,4.47e-07,9;CL:0002420,4.47e-07,9;CL:0002419,4.47e-07,9;CL:0000790,4.47e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.07e-10!48;UBERON:0004119!1.83e-09!130;UBERON:0000925!1.83e-09!130;UBERON:0006595!1.83e-09!130;UBERON:0001007!3.43e-09!128;UBERON:0001555!3.43e-09!128;UBERON:0007026!3.43e-09!128;UBERON:0002390!1.05e-08!45;UBERON:0003061!1.05e-08!45;UBERON:0004921!1.56e-08!126;UBERON:0004185!1.56e-08!126;UBERON:0000926!6.57e-08!193;UBERON:0004120!6.57e-08!193;UBERON:0006603!6.57e-08!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.99e-14,48;UBERON:0002405,1.99e-14,48;UBERON:0002390,1.75e-12,45;UBERON:0003061,1.75e-12,45;UBERON:0004177,1.00e-09,29;UBERON:0005057,1.00e-09,29;UBERON:0004119,1.45e-09,118;UBERON:0000925,1.45e-09,118;UBERON:0006595,1.45e-09,118;UBERON:0000077,1.60e-09,35;UBERON:0001007,2.56e-09,116;UBERON:0001555,2.56e-09,116;UBERON:0007026,2.56e-09,116;UBERON:0004921,1.69e-08,114;UBERON:0000065,3.12e-08,41;UBERON:0000072,5.06e-08,27;UBERON:0001004,7.73e-08,42;UBERON:0002370,1.29e-07,23;UBERON:0000974,1.29e-07,23;UBERON:0004807,1.29e-07,23;UBERON:0005058,1.29e-07,23;UBERON:0003351,1.29e-07,23;UBERON:0009113,1.29e-07,23;UBERON:0003295,1.29e-07,23;UBERON:0009722,1.29e-07,23;UBERON:0005562,1.29e-07,23;UBERON:0007690,1.29e-07,23;UBERON:0006562,4.53e-07,24;UBERON:0003408,4.53e-07,24;UBERON:0001557,4.53e-07,24;UBERON:0001042,4.53e-07,24;UBERON:0008814,4.53e-07,24;UBERON:0009145,4.53e-07,24 | |||
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| ||
|short_description=p2@Zfp429 | |||
}} | }} |
Latest revision as of 21:39, 1 October 2015
Short description: | p2@Zfp429 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfp429_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENSMUST00000109732, NM_001080941, uc007ras.1, uc011zbi.1_5end |
EntrezGene: | Zfp429 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.43e-09 | 12 |
hematopoietic lineage restricted progenitor cell | 8.56e-09 | 25 |
T cell | 1.32e-08 | 11 |
pro-T cell | 1.32e-08 | 11 |
lymphocyte | 1.62e-08 | 13 |
common lymphoid progenitor | 1.62e-08 | 13 |
leukocyte | 1.83e-08 | 17 |
nongranular leukocyte | 1.83e-08 | 17 |
hematopoietic cell | 2.41e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.41e-08 | 32 |
hematopoietic stem cell | 2.41e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.41e-08 | 32 |
mature alpha-beta T cell | 4.47e-07 | 9 |
alpha-beta T cell | 4.47e-07 | 9 |
immature T cell | 4.47e-07 | 9 |
mature T cell | 4.47e-07 | 9 |
immature alpha-beta T cell | 4.47e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.99e-14 | 48 |
immune system | 1.99e-14 | 48 |
hematopoietic system | 1.75e-12 | 45 |
blood island | 1.75e-12 | 45 |
hemopoietic organ | 1.00e-09 | 29 |
immune organ | 1.00e-09 | 29 |
endoderm-derived structure | 1.45e-09 | 118 |
endoderm | 1.45e-09 | 118 |
presumptive endoderm | 1.45e-09 | 118 |
mixed endoderm/mesoderm-derived structure | 1.60e-09 | 35 |
digestive system | 2.56e-09 | 116 |
digestive tract | 2.56e-09 | 116 |
primitive gut | 2.56e-09 | 116 |
subdivision of digestive tract | 1.69e-08 | 114 |
respiratory tract | 3.12e-08 | 41 |
segment of respiratory tract | 5.06e-08 | 27 |
respiratory system | 7.73e-08 | 42 |
thymus | 1.29e-07 | 23 |
neck | 1.29e-07 | 23 |
respiratory system epithelium | 1.29e-07 | 23 |
hemolymphoid system gland | 1.29e-07 | 23 |
pharyngeal epithelium | 1.29e-07 | 23 |
thymic region | 1.29e-07 | 23 |
pharyngeal gland | 1.29e-07 | 23 |
entire pharyngeal arch endoderm | 1.29e-07 | 23 |
thymus primordium | 1.29e-07 | 23 |
early pharyngeal endoderm | 1.29e-07 | 23 |
pharynx | 4.53e-07 | 24 |
gland of gut | 4.53e-07 | 24 |
upper respiratory tract | 4.53e-07 | 24 |
chordate pharynx | 4.53e-07 | 24 |
pharyngeal arch system | 4.53e-07 | 24 |
pharyngeal region of foregut | 4.53e-07 | 24 |