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FFCP PHASE1:Mm9::chr3:34548845..34548856,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20674
|EntrezGene=20674
|HGNC=
|HGNC=
|MCL_coexpression_id=3407
|TSSclassifier=NA
|UniProt=Q60I23,P48432,Q3V2B6
|UniProt=Q60I23,P48432,Q3V2B6
|association_with_transcript=-70bp_to_ENSMUST00000099151,NM_011443,uc008oxu.1_5end
|association_with_transcript=-70bp_to_ENSMUST00000099151,NM_011443,uc008oxu.1_5end
|cluster_id=chr3:34548845..34548856,+
|description=CAGE_peak_4_at_Sox2_5end
|description=CAGE_peak_4_at_Sox2_5end
|id=chr3:34548845..34548856,+
|id=chr3:34548845..34548856,+
|ontology_enrichment_celltype=CL:0000221!5.14e-27!44;CL:0000133!5.14e-27!44;CL:0002319!4.65e-26!43;CL:0000540!5.89e-20!33;CL:0000047!5.89e-20!33;CL:0000031!5.89e-20!33;CL:0000404!5.89e-20!33;CL:0000055!8.78e-20!50;CL:0000393!1.02e-14!39;CL:0000211!1.02e-14!39;CL:0000117!4.49e-14!23;CL:0000337!4.49e-14!23;CL:0002321!6.93e-13!70;CL:0000220!6.93e-13!70;CL:0000333!7.26e-07!10;CL:0000095!7.26e-07!10;CL:0000243!7.26e-07!10;CL:0000123!7.26e-07!10;CL:0000125!7.26e-07!10;CL:0000030!7.26e-07!10;CL:0000339!7.26e-07!10
|ontology_enrichment_celltype_v019_2=CL:0000221,7.08e-33,44;CL:0000133,7.08e-33,44;CL:0002319,3.22e-31,43;CL:0000540,1.85e-21,33;CL:0000047,1.85e-21,33;CL:0000031,1.85e-21,33;CL:0000404,1.85e-21,33;CL:0002321,5.23e-21,70;CL:0000393,3.82e-17,39;CL:0000211,3.82e-17,39;CL:0000117,1.61e-15,23;CL:0000337,1.61e-15,23;CL:0000333,1.65e-10,10;CL:0000095,1.65e-10,10;CL:0000243,1.65e-10,10;CL:0000123,1.65e-10,10;CL:0000125,1.65e-10,10;CL:0000030,1.65e-10,10;CL:0000339,1.65e-10,10;CL:0000107,6.85e-08,9;CL:0002453,1.10e-07,8;CL:0002609,6.90e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.32e-37!75;UBERON:0001016!2.32e-37!75;UBERON:0004121!1.62e-35!102;UBERON:0000924!1.62e-35!102;UBERON:0006601!1.62e-35!102;UBERON:0001017!1.65e-35!73;UBERON:0005743!1.65e-35!73;UBERON:0000033!7.56e-27!63;UBERON:0002346!5.79e-25!71;UBERON:0003075!5.79e-25!71;UBERON:0007284!5.79e-25!71;UBERON:0001049!4.20e-22!52;UBERON:0005068!4.20e-22!52;UBERON:0006241!4.20e-22!52;UBERON:0007135!4.20e-22!52;UBERON:0003056!1.24e-21!49;UBERON:0000955!2.23e-19!50;UBERON:0006238!2.23e-19!50;UBERON:0002616!1.34e-18!49;UBERON:0002020!1.06e-16!34;UBERON:0003080!1.68e-16!40;UBERON:0002780!2.62e-16!39;UBERON:0001890!2.62e-16!39;UBERON:0006240!2.62e-16!39;UBERON:0007811!1.08e-13!86;UBERON:0002791!1.45e-13!29;UBERON:0003528!1.45e-13!29;UBERON:0001893!1.45e-13!29;UBERON:0000153!2.69e-11!94;UBERON:0000956!1.81e-08!21;UBERON:0001869!1.81e-08!21;UBERON:0000203!1.81e-08!21;UBERON:0000010!4.31e-08!11;UBERON:0000020!1.70e-07!12;UBERON:0001032!1.70e-07!12;UBERON:0004456!1.70e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.07e-34,95;UBERON:0000924,8.07e-34,95;UBERON:0006601,8.07e-34,95;UBERON:0001016,5.81e-33,75;UBERON:0001017,3.25e-30,73;UBERON:0002346,1.01e-22,64;UBERON:0003075,1.01e-22,64;UBERON:0007284,1.01e-22,64;UBERON:0010371,2.29e-20,73;UBERON:0002020,6.92e-20,34;UBERON:0003528,1.95e-17,29;UBERON:0002791,1.95e-17,29;UBERON:0001893,1.95e-17,29;UBERON:0003056,2.21e-17,49;UBERON:0001049,3.60e-17,52;UBERON:0005068,3.60e-17,52;UBERON:0006241,3.60e-17,52;UBERON:0007135,3.60e-17,52;UBERON:0000955,2.46e-16,47;UBERON:0006238,2.46e-16,47;UBERON:0000073,2.99e-16,54;UBERON:0002616,3.47e-15,46;UBERON:0002780,3.55e-14,39;UBERON:0001890,3.55e-14,39;UBERON:0006240,3.55e-14,39;UBERON:0010314,3.58e-14,92;UBERON:0003080,1.12e-13,40;UBERON:0001954,1.78e-11,7;UBERON:0003022,1.78e-11,7;UBERON:0002421,1.78e-11,7;UBERON:0000349,1.78e-11,7;UBERON:0002600,1.78e-11,7;UBERON:0000010,1.14e-10,11;UBERON:0000956,7.57e-10,21;UBERON:0001869,7.57e-10,21;UBERON:0000203,7.57e-10,21;UBERON:0002420,1.33e-09,8;UBERON:0007245,1.33e-09,8;UBERON:0010009,1.33e-09,8;UBERON:0010011,1.33e-09,8;UBERON:0000454,1.33e-09,8;UBERON:0000369,6.40e-09,5;UBERON:0002435,6.40e-09,5;UBERON:0000204,6.40e-09,5;UBERON:0010082,6.40e-09,5;UBERON:0011216,6.45e-09,194;UBERON:0002410,6.85e-08,9;UBERON:0002619,8.92e-08,17
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,1.75748946187577,1.55543919259427,0.839918529752175,4.31257693094915,0,0,0,0,0,0,2.63011399117477,2.11596391708813,1.26766280701236,1.0165335962074,0,0,0,0,5.09320187881288,5.76327457982332,1.14058573539325,0.675029691658453,1.05162480675691,3.14216082844184,2.87129103237098,3.30725157880376,4.31304619582064,3.67687514644008,0,0.766124028511126,0.768032666281217,3.82470234417562,3.7509933876988,6.77187381723788,1.67509799400829,1.12552522006336,0.61119299110724,0.589257170947335,2.42031857358475,0.931997229126503,2.27178579999552,3.32514864469856,0,0,0,0,0,0,0,0,0,0,5.49289337129054,0,0,0,1.08245520505607,1.01343946190039,1.01104889002957,0,0,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,0.299581278809645,1.37250180845588,1.50785222535437,1.21677024134594,0.255715457330331,0.20778804455956,0.486723789203273,0,0,0,0.420883711772948,0.910843100738926,0.459804208866946,1.44049703844279,2.56198190320716,3.06164246180975,5.89323113310309,2.90475346135159,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,1.9551876352064,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.481651769963376,1.52375192569864,0,0,1.26203287766503,0.780877488593277,1.93881057959519,1.91175038362042,1.78238939265915,2.54768877709949,0.404810701674894,1.46127928955656,1.58115111178609,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,1.08036656418786,0.905510786479282,0.857348140126369,0.709360934569094,0.713475270408282,0.658196082408484,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.540026704109006,1.25452977608681,0.436725127492355,0.539457385539283,0.247960367176008,0.26175594198403,0,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.887943813496259,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,1.71868654031819,0.171853182343688,0,0.755393897389701,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,1.24544817101012,1.99512436700516,1.02440163452481,0.243106717068294,0.628839487883947,0.367687016900028,0.222246727801615,0,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.347652977834566,0.578727661391115,0,0.588795680537589,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0.999242311751784,0.467863216890817,0,0,0,0.231867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,1.75748946187577,1.55543919259427,0.839918529752175,4.31257693094915,0,0,0,0,0,0,2.63011399117477,2.11596391708813,1.26766280701236,1.0165335962074,0,0,0,0,5.09320187881288,5.76327457982332,1.14058573539325,0.675029691658453,1.05162480675691,3.14216082844184,2.87129103237098,3.30725157880376,4.31304619582064,3.67687514644008,0,0.766124028511126,0.768032666281217,3.82470234417562,3.7509933876988,6.77187381723788,1.67509799400829,1.12552522006336,0.61119299110724,0.589257170947335,2.42031857358475,0.931997229126503,2.27178579999552,3.32514864469856,0,0,0,0,0,0,0,0,0,0,5.49289337129054,0,0,0,1.08245520505607,1.01343946190039,1.01104889002957,0,0,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,0.299581278809645,1.37250180845588,1.50785222535437,1.21677024134594,0.255715457330331,0.20778804455956,0.486723789203273,0,0,0,0.420883711772948,0.910843100738926,0.459804208866946,1.44049703844279,2.56198190320716,3.06164246180975,5.89323113310309,2.90475346135159,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,1.9551876352064,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.481651769963376,1.52375192569864,0,0,1.26203287766503,0.780877488593277,1.93881057959519,1.91175038362042,1.78238939265915,2.54768877709949,0.404810701674894,1.46127928955656,1.58115111178609,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,1.08036656418786,0.905510786479282,0.857348140126369,0.709360934569094,0.713475270408282,0.658196082408484,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.540026704109006,1.25452977608681,0.436725127492355,0.539457385539283,0.247960367176008,0.26175594198403,0,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.887943813496259,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,1.71868654031819,0.171853182343688,0,0.755393897389701,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,1.24544817101012,1.99512436700516,1.02440163452481,0.243106717068294,0.628839487883947,0.367687016900028,0.222246727801615,0,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.347652977834566,0.578727661391115,0,0.588795680537589,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0.999242311751784,0.467863216890817,0,0,0,0.231867835620421
|short_description=p4@Sox2
|short_description=p4@Sox2
}}
}}

Latest revision as of 23:14, 1 October 2015

Short description:p4@Sox2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sox2_5end
Coexpression cluster:MCL_coexpression_mm9:3407
Association with transcript: -70bp_to_ENSMUST00000099151, NM_011443, uc008oxu.1_5end
EntrezGene:Sox2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Sox2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D92.27
Mouse Schwann, donor2.CNhs12573.11746-123F93.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C63.06
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure8.07e-3495
ectoderm8.07e-3495
presumptive ectoderm8.07e-3495
nervous system5.81e-3375
central nervous system3.25e-3073
neurectoderm1.01e-2264
neural plate1.01e-2264
presumptive neural plate1.01e-2264
ecto-epithelium2.29e-2073
gray matter6.92e-2034
brain grey matter1.95e-1729
regional part of telencephalon1.95e-1729
telencephalon1.95e-1729
pre-chordal neural plate2.21e-1749
neural tube3.60e-1752
neural rod3.60e-1752
future spinal cord3.60e-1752
neural keel3.60e-1752
brain2.46e-1647
future brain2.46e-1647
regional part of nervous system2.99e-1654
regional part of brain3.47e-1546
regional part of forebrain3.55e-1439
forebrain3.55e-1439
future forebrain3.55e-1439
structure with developmental contribution from neural crest3.58e-1492
anterior neural tube1.12e-1340
Ammon's horn1.78e-117
lobe parts of cerebral cortex1.78e-117
hippocampal formation1.78e-117
limbic system1.78e-117
limbic lobe1.78e-117
peripheral nervous system1.14e-1011
cerebral cortex7.57e-1021
cerebral hemisphere7.57e-1021
pallium7.57e-1021
basal ganglion1.33e-098
nuclear complex of neuraxis1.33e-098
aggregate regional part of brain1.33e-098
collection of basal ganglia1.33e-098
cerebral subcortex1.33e-098
corpus striatum6.40e-095
striatum6.40e-095
ventral part of telencephalon6.40e-095
future corpus striatum6.40e-095
organ system subdivision6.45e-09194
autonomic nervous system6.85e-089
regional part of cerebral cortex8.92e-0817
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