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FFCP PHASE1:Mm9::chr19:19185671..19185693,-: Difference between revisions

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(Created page with "{{FFCP |id=chr19:19185671..19185693,- |short_description=p1@Rorb |description=CAGE_peak_1_at_Rorb_5end |association_with_transcript=0bp_to_ENSMUST00000112832,NM_001043354,...")
 
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{{FFCP
{{FFCP
|id=chr19:19185671..19185693,-
|DHSsupport=NA
|short_description=p1@Rorb
|DPIdataset=NA
|description=CAGE_peak_1_at_Rorb_5end
|association_with_transcript=0bp_to_ENSMUST00000112832,NM_001043354,uc008gye.1_5end
|EntrezGene=225998
|EntrezGene=225998
|HGNC=
|HGNC=
|MCL_coexpression_id=53
|TSSclassifier=NA
|UniProt=Q8R1B8
|UniProt=Q8R1B8
|association_with_transcript=0bp_to_ENSMUST00000112832,NM_001043354,uc008gye.1_5end
|cluster_id=chr19:19185671..19185693,-
|description=CAGE_peak_1_at_Rorb_5end
|id=chr19:19185671..19185693,-
|ontology_enrichment_celltype=CL:0000117!2.30e-10!23;CL:0000337!2.30e-10!23;CL:0000221!3.60e-10!44;CL:0000133!3.60e-10!44;CL:0002319!8.15e-10!43;CL:0000540!6.49e-09!33;CL:0000047!6.49e-09!33;CL:0000031!6.49e-09!33;CL:0000404!6.49e-09!33;CL:0000055!5.68e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,4.63e-11,23;CL:0000337,4.63e-11,23;CL:0000221,5.17e-11,44;CL:0000133,5.17e-11,44;CL:0002319,1.25e-10,43;CL:0000540,1.69e-09,33;CL:0000047,1.69e-09,33;CL:0000031,1.69e-09,33;CL:0000404,1.69e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.12e-30!102;UBERON:0000924!1.12e-30!102;UBERON:0006601!1.12e-30!102;UBERON:0002346!6.36e-29!71;UBERON:0003075!6.36e-29!71;UBERON:0007284!6.36e-29!71;UBERON:0000033!8.19e-29!63;UBERON:0000073!3.37e-27!75;UBERON:0001016!3.37e-27!75;UBERON:0001017!7.08e-27!73;UBERON:0005743!7.08e-27!73;UBERON:0003056!2.02e-26!49;UBERON:0001049!4.45e-24!52;UBERON:0005068!4.45e-24!52;UBERON:0006241!4.45e-24!52;UBERON:0007135!4.45e-24!52;UBERON:0000955!2.88e-23!50;UBERON:0006238!2.88e-23!50;UBERON:0002616!9.71e-23!49;UBERON:0003080!9.20e-20!40;UBERON:0002780!3.61e-19!39;UBERON:0001890!3.61e-19!39;UBERON:0006240!3.61e-19!39;UBERON:0002020!1.80e-16!34;UBERON:0002791!4.68e-14!29;UBERON:0003528!4.68e-14!29;UBERON:0001893!4.68e-14!29;UBERON:0007811!9.83e-12!86;UBERON:0000956!4.40e-11!21;UBERON:0001869!4.40e-11!21;UBERON:0000203!4.40e-11!21;UBERON:0000153!6.15e-11!94;UBERON:0002619!2.47e-09!17;UBERON:0002021!9.20e-08!10;UBERON:0000411!9.20e-08!10;UBERON:0001950!9.20e-08!10;UBERON:0000468!1.13e-07!333;UBERON:0004111!1.18e-07!122;UBERON:0000970!1.68e-07!9;UBERON:0000019!1.68e-07!9;UBERON:0000047!1.68e-07!9;UBERON:0004088!1.68e-07!9;UBERON:0002104!1.68e-07!9;UBERON:0001456!1.68e-07!9;UBERON:0003072!1.68e-07!9;UBERON:0003071!1.68e-07!9;UBERON:0004128!1.68e-07!9;UBERON:0000025!4.86e-07!114;UBERON:0000020!5.28e-07!12;UBERON:0001032!5.28e-07!12;UBERON:0004456!5.28e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.24e-33,95;UBERON:0000924,3.24e-33,95;UBERON:0006601,3.24e-33,95;UBERON:0002346,1.29e-32,64;UBERON:0003075,1.29e-32,64;UBERON:0007284,1.29e-32,64;UBERON:0010371,2.91e-30,73;UBERON:0001016,1.85e-29,75;UBERON:0001017,4.11e-29,73;UBERON:0003056,2.13e-28,49;UBERON:0000073,1.50e-27,54;UBERON:0001049,4.14e-26,52;UBERON:0005068,4.14e-26,52;UBERON:0006241,4.14e-26,52;UBERON:0007135,4.14e-26,52;UBERON:0010314,6.66e-24,92;UBERON:0000955,3.16e-23,47;UBERON:0006238,3.16e-23,47;UBERON:0002616,1.15e-22,46;UBERON:0003080,3.31e-21,40;UBERON:0002780,1.45e-20,39;UBERON:0001890,1.45e-20,39;UBERON:0006240,1.45e-20,39;UBERON:0002020,1.18e-17,34;UBERON:0003528,4.80e-15,29;UBERON:0002791,4.80e-15,29;UBERON:0001893,4.80e-15,29;UBERON:0000956,7.76e-12,21;UBERON:0001869,7.76e-12,21;UBERON:0000203,7.76e-12,21;UBERON:0002619,5.98e-10,17;UBERON:0002021,2.96e-08,10;UBERON:0000411,2.96e-08,10;UBERON:0001950,2.96e-08,10;UBERON:0000970,5.65e-08,9;UBERON:0000019,5.65e-08,9;UBERON:0000047,5.65e-08,9;UBERON:0010312,5.65e-08,9;UBERON:0004088,5.65e-08,9;UBERON:0002104,5.65e-08,9;UBERON:0001456,5.65e-08,9;UBERON:0003072,5.65e-08,9;UBERON:0004128,5.65e-08,9;UBERON:0003071,5.65e-08,9;UBERON:0000020,5.20e-07,12;UBERON:0001032,5.20e-07,12;UBERON:0004456,5.20e-07,12;UBERON:0005085,8.09e-07,13;UBERON:0004111,8.70e-07,122
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|short_description=p1@Rorb
}}
}}

Latest revision as of 23:20, 1 October 2015

Short description:p1@Rorb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rorb_5end
Coexpression cluster:MCL_coexpression_mm9:53
Association with transcript: 0bp_to_ENSMUST00000112832, NM_001043354, uc008gye.1_5end
EntrezGene:Rorb
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Rorb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.93
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C322.66
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C87.79
Mouse Microglia, donor2.CNhs12634.11736-123E815.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.13
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F524.44
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D922.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D525.62
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D228.30
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D627.58
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D349.55
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F391.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D777.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.40
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.41
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.89
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I642.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D670.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F675.74
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.23
Mouse Schwann, donor1.CNhs12507.11728-123D98.63
Mouse Schwann, donor2.CNhs12573.11746-123F96.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C13.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B235.13
cerebellum, neonate N30.CNhs11135.1395-42I221.99
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A469.95
corpus striatum, adult.CNhs10487.19-21D849.41
corpus striatum, neonate N00.CNhs11226.630-43F121.99
cortex, adult.CNhs10473.12-14D5107.42
cortex, neonate N30.CNhs11107.1392-42F298.19
diencephalon, adult.CNhs10482.20-12F292.47
diencephalon, neonate N30.CNhs11201.1388-42B265.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G457.24
eyeball, embryo E12.CNhs11016.345-16C6268.44
eyeball, embryo E14.CNhs10521.399-16E2254.96
eyeball, embryo E15.CNhs10593.426-16C9501.29
eyeball, embryo E17.CNhs11023.1261-18D4615.63
eyeball, neonate N00.CNhs11207.633-15C6848.14
eyeball, neonate N01.CNhs11140.1532-43E71029.39
eyeball, neonate N02.CNhs11205.1551-44G8850.72
eyeball, neonate N16.CNhs11188.777-19A2160.14
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E856.78
hippocampus, neonate N00.CNhs11228.627-43G110.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F85.87
lung, embryo E15.CNhs11020.432-17C58.32
lung, embryo E16.CNhs10998.458-17B67.28
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C249.45
medulla oblongata, neonate N30.CNhs11200.1396-42A345.36
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I936.31
ovary, adult.CNhs10507.91-2I75.82
ovary, embryo E18.CNhs11040.505-44H76.77
ovary, neonate N00.CNhs11217.1299-22I412.22
oviduct, adult pregnant day01.CNhs10500.988-6G653.12
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G874.56
pituitary gland, embryo E12.CNhs11018.346-16E689.49
pituitary gland, embryo E13.CNhs11009.370-44C721.86
pituitary gland, embryo E14.CNhs11037.398-44A540.08
pituitary gland, embryo E15.CNhs10592.427-16B939.55
pituitary gland, embryo E16.CNhs11036.449-43F631.39
pituitary gland, embryo E17.CNhs11039.1265-44F528.80
pituitary gland, neonate N00.CNhs11190.1308-22E926.49
placenta, adult pregnant day10.CNhs10472.539-13I720.65
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F814.11
skin, adult.CNhs10492.30-1C311.54
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C948.95
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F532.47
uterus, adult.CNhs10509.92-27E553.11
vagina, adult.CNhs10502.89-27D512.65
vesicular gland, adult.CNhs10491.51-27F849.66
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1139.49
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2155.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3155.83
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7224.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4119.89
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5133.70
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6120.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7117.08
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8122.35
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9133.58
whole body, embryo E11.CNhs11014.324-5I84.46
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D210.94
whole body, embryo E14.CNhs10519.395-14B110.69
whole body, embryo E16.CNhs10514.453-14F212.69
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.41
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.43
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.73
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.60
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.72
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.79
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.62
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.68
whole body, embryo E17.5.CNhs10513.490-9F913.12
whole body, embryo E17.CNhs10517.475-3I521.73
whole body, embryo E18.CNhs10516.493-3B311.46
whole body, neonate N00.CNhs10525.657-19C214.83
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.63e-1123
neuroblast (sensu Vertebrata)4.63e-1123
ectodermal cell5.17e-1144
neurectodermal cell5.17e-1144
neural cell1.25e-1043
neuron1.69e-0933
neuronal stem cell1.69e-0933
neuroblast1.69e-0933
electrically signaling cell1.69e-0933

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.24e-3395
ectoderm3.24e-3395
presumptive ectoderm3.24e-3395
neurectoderm1.29e-3264
neural plate1.29e-3264
presumptive neural plate1.29e-3264
ecto-epithelium2.91e-3073
nervous system1.85e-2975
central nervous system4.11e-2973
pre-chordal neural plate2.13e-2849
regional part of nervous system1.50e-2754
neural tube4.14e-2652
neural rod4.14e-2652
future spinal cord4.14e-2652
neural keel4.14e-2652
structure with developmental contribution from neural crest6.66e-2492
brain3.16e-2347
future brain3.16e-2347
regional part of brain1.15e-2246
anterior neural tube3.31e-2140
regional part of forebrain1.45e-2039
forebrain1.45e-2039
future forebrain1.45e-2039
gray matter1.18e-1734
brain grey matter4.80e-1529
regional part of telencephalon4.80e-1529
telencephalon4.80e-1529
cerebral cortex7.76e-1221
cerebral hemisphere7.76e-1221
pallium7.76e-1221
regional part of cerebral cortex5.98e-1017
occipital lobe2.96e-0810
visual cortex2.96e-0810
neocortex2.96e-0810
eye5.65e-089
camera-type eye5.65e-089
simple eye5.65e-089
immature eye5.65e-089
ocular region5.65e-089
visual system5.65e-089
face5.65e-089
optic cup5.65e-089
optic vesicle5.65e-089
eye primordium5.65e-089
sense organ5.20e-0712
sensory system5.20e-0712
entire sense organ system5.20e-0712
ectodermal placode8.09e-0713
anatomical conduit8.70e-07122
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