FF:470-26G5: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@ | |DRA_sample_Accession=CAGE@SAMD00005676 | ||
|accession_numbers=CAGE;DRX009104;DRR009978;DRZ001403;DRZ002786 | |accession_numbers=CAGE;DRX009104;DRR009978;DRZ001403;DRZ002786;DRZ012753;DRZ014136 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000473,UBERON:0000991,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003135,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0003101,UBERON:0000079 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000473,UBERON:0000991,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003135,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0003101,UBERON:0000079 | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr1:140739014..140739032,-!p1@Lhx9!2.32!261.15!Lhx9;;chr10:22539932..22539956,-!p1@Tcf21!2.17!377.82!Tcf21;;chr2:38570011..38570034,-!p1@Nr5a1!2.10!125.62!Nr5a1;;chrX:90531838..90531861,+!p1@Arx!2.09!152.84!Arx;;chr7:147129712..147129774,+!p1@Utf1!1.99!96.45!Utf1;;chr14:63864056..63864102,-!p1@Gata4!1.96!154.01!Gata4;;chr1:168168856..168168893,-!p1@Mael!1.69!48.22!Mael;;chr15:102828658..102828678,+!p1@Hoxc6!1.65!43.17!Hoxc6;;chr1:168168817..168168850,-!p2@Mael!1.62!40.45!Mael;;chr2:74529970..74529997,+!p1@Hoxd10!1.42!25.08!Hoxd10;;chr2:74549968..74549996,+!p1@Hoxd3!1.35!26.45!Hoxd3;;chr2:104966766..104966786,+!p1@Wt1!1.34!32.67!Wt1;;chr15:35225845..35225867,+!p1@Osr2!1.30!47.25!Osr2;;chr2:104966874..104966907,+!p2@Wt1!1.29!18.47!Wt1;;chr2:74536026..74536039,+!p1@Hoxd9!1.29!18.47!Hoxd9;;chr12:3891810..3891829,+!p2@Dnmt3a!1.25!26.25!Dnmt3a;;chr2:180377386..180377462,-!p1@Tcfl5!1.23!19.06!Tcfl5;;chr12:34642510..34642530,+!p1@Twist1!1.22!49.00!Twist1;;chr10:126778916..126778974,-!p1@Gli1!1.21!34.22!Gli1;;chr19:25580110..25580163,+!p1@Dmrt1!1.18!14.19!Dmrt1;;chrX:83437105..83437121,+!p1@Nr0b1!1.18!14.00!Nr0b1;;chr11:85646303..85646329,+!p1@Tbx2!1.17!90.03!Tbx2;;chr17:25707623..25707639,-!p1@Sox8!1.17!58.34!Sox8;;chr2:152758901..152758925,-!p1@Foxs1!1.12!54.25!Foxs1;;chr17:35642997..35643014,+!p1@Pou5f1!1.11!11.86!Pou5f1;;chr17:35642973..35642994,+!p2@Pou5f1!1.07!10.69!Pou5f1;;chr15:102828642..102828653,+!p2@Hoxc6!1.05!10.31!Hoxc6;;chr2:104966933..104966966,+!p3@Wt1!1.05!10.11!Wt1;;chr2:74536050..74536065,+!p2@Hoxd9!1.05!10.11!Hoxd9;;chr12:3891753..3891801,+!p4@Dnmt3a!1.04!16.33!Dnmt3a;;chr5:31271028..31271040,+!p1@Tcf23!1.04!9.92!Tcf23;;chr2:74550015..74550057,+!p2@Hoxd3!1.02!9.53!Hoxd3;;chr11:85646263..85646278,+!p2@Tbx2!0.99!22.75!Tbx2;;chr19:59533221..59533271,+!p1@Emx2!0.98!10.69!Emx2;;chr14:63890660..63890687,-!p7@Gata4!0.98!8.56!Gata4;;chr14:63890491..63890516,-!p2@Gata4!0.98!8.56!Gata4;;chrX:45245679..45245702,-!p1@Smarca1!0.94!35.97!Smarca1;;chr2:38567715..38567730,-!p2@Nr5a1!0.92!7.39!Nr5a1;;chr2:74529998..74530020,+!p2@Hoxd10!0.92!7.39!Hoxd10;;chr10:12810631..12810649,+!p1@Plagl1!0.91!194.06!Plagl1;;chr14:63890459..63890484,-!p4@Gata4!0.91!7.19!Gata4;;chr7:6615049..6615056,-!p1@uc009fbu.1!0.91!7.19!Zim2;;chr1:38684260..38684312,-!p2@Aff3!0.90!50.75!Aff3;;chr4:133109285..133109308,+!p1@Nr0b2!0.90!7.00!Nr0b2;;chr7:6649134..6649167,-!p1@Zim1!0.89!38.31!Zim1;;chr15:75578748..75578752,-!p1@Mafa!0.89!6.81!Mafa;;chr4:122911086..122911112,+!p1@Heyl!0.88!81.09!Heyl;;chr2:152758938..152758954,-!p2@Foxs1!0.88!9.33!Foxs1;;chr1:140739042..140739054,-!p2@Lhx9!0.88!6.61!Lhx9;;chr14:63864337..63864381,-!p6@Gata4!0.88!6.61!Gata4;;chr8:26958093..26958148,-!p2@Ash2l!0.88!6.61!Ash2l;;chr10:77512581..77512592,+!p3@Dnmt3l!0.88!6.61!Dnmt3l;;chr2:104966465..104966479,+!p6@Wt1!0.87!6.42!Wt1;;chr2:104966662..104966673,+!p4@Wt1!0.85!6.03!Wt1;;chr19:25580226..25580261,+!p2@Dmrt1!0.85!6.03!Dmrt1;;chr11:85646341..85646352,+!p3@Tbx2!0.84!12.06!Tbx2;;chr2:169458799..169458832,+!p5@Tshz2!0.83!9.92!Tshz2;;chr1:120879128..120879183,-!p3@Gli2!0.82!11.08!Gli2;;chr2:74536071..74536083,+!p4@Hoxd9!0.81!5.44!Hoxd9;;chr7:147129777..147129814,+!p2@Utf1!0.81!5.44!Utf1;;chr2:74535796..74535808,+!p3@Hoxd9!0.80!5.25!Hoxd9;;chr2:169458192..169458247,+!p1@Tshz2!0.79!50.36!Tshz2;;chr7:17647736..17647772,-!p1@Hif3a!0.79!19.83!Hif3a;;chr2:91864300..91864379,-!p2@Creb3l1!0.79!15.75!Creb3l1;;chr10:80809447..80809515,-!p5@Hmg20b!0.79!6.42!Hmg20b;;chr9:36954842..36954908,-!p1@Pknox2!0.77!63.00!Pknox2;;chr7:147129680..147129693,+!p3@Utf1!0.77!4.86!Utf1;;chr11:98826125..98826141,+!p12@Rara!0.77!4.86!Rara;;chr7:77511403..77511450,-!p3@Nr2f2!0.75!10.50!Nr2f2;;chr2:91864449..91864492,-!p3@Creb3l1!0.75!7.97!Creb3l1;;chr2:25702844..25702859,-!p1@Sohlh1!0.75!4.67!Sohlh1;;chr12:77278238..77278252,-!p1@Esr2!0.75!4.67!Esr2;;chr4:119960301..119960359,-!p1@Foxo6!0.74!15.75!Foxo6;;chr18:11052485..11052508,+!p2@Gata6!0.74!13.61!Gata6;;chr15:35225873..35225889,+!p2@Osr2!0.74!4.47!Osr2;;chr2:105003277..105003280,+!p5@Wt1!0.74!4.47!Wt1;;chr7:77505617..77505632,-!p1@Nr2f2!0.73!227.12!Nr2f2;;chr11:52096804..52096896,-!p1@Tcf7!0.73!39.47!Tcf7;;chr2:30700788..30700824,+!p2@Prrx2!0.73!7.00!Prrx2;;chrX:45245644..45245666,-!p2@Smarca1!0.71!14.58!Smarca1;;chr4:84320893..84320910,-!p1@Bnc2!0.71!9.92!Bnc2;;chr2:74549945..74549965,+!p4@Hoxd3!0.71!4.08!Hoxd3;;chr2:152223441..152223465,-!p2@Sox12!0.70!18.47!Sox12;;chr12:34642682..34642753,+!p2@Twist1!0.70!11.67!Twist1;;chr18:11052456..11052477,+!p3@Gata6!0.69!13.42!Gata6;;chr11:5761889..5761969,+!p1@Aebp1!0.67!178.31!Aebp1;;chr2:169458519..169458555,+!p2@Tshz2!0.67!16.72!Tshz2;;chr2:74542918..74542971,+!p1@Hoxd8!0.67!5.83!Hoxd8;;chr4:3865501..3865548,-!p1@Plag1!0.66!21.20!Plag1;;chr2:181194069..181194144,-!p1@Zbtb46!0.65!22.95!Zbtb46;;chr11:5761979..5761992,+!p2@Aebp1!0.65!7.78!Aebp1;;chr11:98826178..98826197,+!p7@Rara!0.65!3.50!Rara;;chr14:63890519..63890539,-!p3@Gata4!0.65!3.50!Gata4;;chr14:63890691..63890718,-!p8@Gata4!0.65!3.50!Gata4;;chr9:44249274..44249313,-!p1@Foxr1!0.65!3.50!Foxr1;;chr15:76701495..76701535,-!p3@Zfp251!0.65!3.50!Zfp251;;chr5:31270977..31270988,+!p3@Tcf23!0.65!3.50!Tcf23;;chr1:38684383..38684394,-!p4@Aff3!0.64!4.86!Aff3;;chr7:52471143..52471186,+!p1@Tead2!0.63!40.64!Tead2;;chr10:5734525..5734569,-!p3@Esr1!0.63!5.83!Esr1;;chr7:89137163..89137200,-!p1@Bnc1!0.63!4.08!Bnc1;;chr1:120949949..120950000,-!p1@Gli2!0.62!16.14!Gli2;;chr15:81633203..81633215,+!p3@Tef!0.62!5.44!Tef;;chr15:103164702..103164778,-!p3@Zfp385a!0.62!3.89!Zfp385a;;chr14:76904313..76904328,+!p1@Tsc22d1!0.61!711.50!Tsc22d1;;chr11:74981654..74981658,-!p1@Hic1!0.61!14.19!Hic1;;chr7:19679964..19679982,+!p1@Six5!0.61!10.11!Six5;;chr7:77511622..77511657,-!p5@Nr2f2!0.61!4.08!Nr2f2;;chr2:74543202..74543213,+!p3@Hoxd8!0.61!3.11!Hoxd8;;chr2:104966436..104966455,+!p7@Wt1!0.61!3.11!Wt1;;chr15:40486566..40486600,+!p1@Zfpm2!0.60!21.00!Zfpm2;;chr8:90483459..90483475,-!p1@Zfp423!0.60!9.53!Zfp423;;chr17:47278081..47278103,+!p1@Trerf1!0.60!7.78!Trerf1;;chr8:90483433..90483457,-!p2@Zfp423!0.60!4.28!Zfp423;;chr6:52176164..52176195,-!p1@Hoxa9!0.60!3.89!Hoxa9;;chr10:126779021..126779032,-!p2@Gli1!0.60!3.89!Gli1;;chr18:11052642..11052659,+!p1@Gata6!0.59!17.31!Gata6;;chr19:25580272..25580305,+!p3@Dmrt1!0.59!2.92!Dmrt1;;chrX:35419715..35419724,+!p1@Rhox10!0.59!2.92!Rhox10;;chr2:74542974..74542986,+!p5@Hoxd8!0.59!2.92!Hoxd8;;chr4:84321280..84321298,-!p5@Bnc2!0.59!2.92!Bnc2;;chr16:14705925..14705951,+!p1@Snai2!0.58!23.92!Snai2;;chr14:65977324..65977372,+!p2@Zfp395!0.58!19.25!Zfp395;;chr2:169458352..169458397,+!p3@Tshz2!0.58!8.17!Tshz2;;chr15:40486427..40486437,+!p5@Zfpm2!0.58!3.89!Zfpm2;;chr10:5636374..5636421,-!p1@Esr1!0.58!3.69!Esr1;;chr15:81633165..81633188,+!p2@Tef!0.57!27.61!Tef;;chr13:22036953..22037009,+!p1@Zfp184!0.57!8.56!Zfp184;;chr16:55966407..55966447,+!p6@Rpl24,p6@Zbtb11!0.57!7.58!Zbtb11;;chr1:120949925..120949947,-!p4@Gli2!0.57!6.03!Gli2;;chr11:85646469..85646488,+!p5@Tbx2!0.57!4.47!Tbx2;;chr15:40486883..40486903,+!p4@Zfpm2!0.57!3.89!Zfpm2;;chr14:69808725..69808748,+!p1@Nkx3-1!0.57!2.72!Nkx3-1;;chr2:104966909..104966920,+!p8@Wt1!0.57!2.72!Wt1;;chr3:130815472..130815497,+!p6@Lef1!0.57!2.72!Lef1;;chr2:74543397..74543435,+!p2@Hoxd8!0.57!2.72!Hoxd8;;chr4:84321317..84321332,-!p4@Bnc2!0.57!2.72!Bnc2;;chr2:25562346..25562433,+!p1@Bmyc!0.56!60.67!Bmyc;;chr19:26822880..26822964,+!p2@Smarca2!0.56!27.81!Smarca2;;chr2:152223469..152223512,-!p1@Sox12!0.56!16.72!Sox12;;chr5:125538737..125538781,-!p2@Ncor2!0.56!11.47!Ncor2;;chr2:152223783..152223812,-!p4@Sox12!0.56!7.00!Sox12;;chr17:37139472..37139514,+!p1@Zfp57!0.55!21.39!Zfp57;;chr14:56443806..56443848,+!p1@Nfatc4!0.55!5.83!Nfatc4;;chr7:17642053..17642066,-!p2@Hif3a!0.55!3.89!Hif3a;;chr4:84321300..84321315,-!p2@Bnc2!0.55!3.31!Bnc2;;chr2:74529942..74529953,+!p4@Hoxd10!0.55!2.53!Hoxd10;;chr2:24331085..24331100,-!p1@Pax8!0.55!2.53!Pax8;;chr5:31271010..31271019,+!p2@Tcf23!0.55!2.53!Tcf23;;chr15:102820964..102821006,+!p1@Hoxc8!0.55!2.53!Hoxc8;;chr13:83712735..83712761,+!p9@Mef2c!0.55!2.53!Mef2c;;chr15:102821007..102821021,+!p2@Hoxc8!0.55!2.53!Hoxc8;;chr2:91864661..91864686,-!p1@Creb3l1!0.54!68.64!Creb3l1;;chr12:9581262..9581282,+!p1@Osr1!0.54!37.33!Osr1;;chr7:37483021..37483078,+!p1@Tshz3!0.54!9.14!Tshz3;;chr16:14705961..14705978,+!p2@Snai2!0.53!14.00!Snai2;;chr12:12948633..12948651,-!p1@Mycn!0.52!28.78!Mycn;;chr4:128483534..128483613,-!p1@Zfp362!0.52!20.61!Zfp362;;chr12:28027561..28027591,-!p1@Sox11!0.52!19.45!Sox11;;chr2:130120884..130120972,+!p1@Ebf4!0.52!17.11!Ebf4;;chr8:59799772..59799789,+!p1@Hand2!0.52!7.97!Hand2;;chr1:9690424..9690467,-!p1@Mybl1!0.52!5.64!Mybl1;;chr4:122911056..122911065,+!p2@Heyl!0.52!3.89!Heyl;;chr15:50720589..50720600,-!p12@Trps1!0.52!3.31!Trps1;;chr6:72850124..72850210,-!p7@Kcmf1!0.52!3.31!Kcmf1;;chr19:59533139..59533152,+!p2@Emx2!0.52!2.33!Emx2;;chr15:102839948..102839975,+!p3@Hoxc6!0.52!2.33!Hoxc6;;chr2:74543103..74543135,+!p4@Hoxd8!0.52!2.33!Hoxd8;;chr4:62626594..62626651,+!p1@Zfp618!0.51!10.50!Zfp618;;chr2:169458838..169458859,+!p4@Tshz2!0.51!5.25!Tshz2;;chr7:26067619..26067702,+!p2@Cic!0.50!15.75!Cic;;chr17:28487603..28487626,-!p2@Tead3!0.50!5.44!Tead3;;chr7:37483231..37483263,+!p2@Tshz3!0.50!3.69!Tshz3;;chr1:9690398..9690410,-!p2@Mybl1!0.50!2.72!Mybl1;;chr19:59533429..59533470,+!p4@Emx2!0.50!2.14!Emx2;;chr10:77512605..77512612,+!p7@Dnmt3l!0.50!2.14!Dnmt3l;;chr2:74543235..74543246,+!p7@Hoxd8!0.50!2.14!Hoxd8;;chr2:74560109..74560131,+!p1@Hoxd4!0.50!2.14!Hoxd4;;chr14:32979060..32979091,+!p4@Gm6768,p4@Ncoa4!0.50!2.14!Ncoa4;;chr12:30525072..30525115,+!p14@Myt1l!0.50!2.14!Myt1l;;chrX:154006915..154006923,-!p1@Yy2!0.50!2.14!Yy2;;chr7:77511234..77511302,-!p2@Nr2f2!0.49!18.08!Nr2f2;;chr19:7342725..7342784,+!p1@Rcor2!0.49!11.08!Rcor2;;chr2:34227446..34227511,-!p1@Pbx3!0.49!5.83!Pbx3;;chr2:156666727..156666753,+!p2@Tgif2!0.49!3.50!Tgif2;;chr5:138187341..138187406,+!p3@Tsc22d4!0.48!28.97!Tsc22d4;;chr14:65977498..65977528,+!p1@Zfp395!0.48!17.70!Zfp395;;chr11:102177921..102177960,-!p9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ra;;chrX:137077134..137077143,-!p10@Tsc22d3!0.17!0.58!Tsc22d3;;chr4:154597177..154597195,-!p1@Ski!0.16!49.20!Ski;;chr12:114336410..114336478,+!p1@Mta1!0.16!41.61!Mta1;;chr7:30880169..30880211,+!p1@Zfp260!0.16!41.61!Zfp260;;chr1:15795720..15795756,+!p1@Terf1!0.16!37.92!Terf1;;chr2:27532754..27532815,+!p1@Rxra!0.16!37.33!Rxra;;chr7:26035739..26035757,-!p1@Erf!0.16!31.70!Erf;;chrX:20527671..20527719,-!p1@Elk1!0.16!28.97!Elk1;;chr1:72629819..72629856,+!p1@Smarcal1!0.16!23.92!Smarcal1;;chr9:96096707..96096772,+!p1@Tfdp2!0.16!19.25!Tfdp2;;chr16:84835146..84835186,+!p2@Gabpa!0.16!17.11!Gabpa;;chr3:9610090..9610124,-!p1@Zfp704!0.16!16.72!Zfp704;;chr5:143942400..143942474,-!p1@Rbak!0.16!13.03!Rbak;;chr7:13483149..13483234,+!p1@Zscan22!0.16!12.06!Zscan22;;chr2:91489908..91489941,-!p1@Zfp408!0.16!9.92!Zfp408;;chr4:97444590..97444607,+!p6@Nfia!0.16!8.75!Nfia;;chr2:162880387..162880413,+!p1@Mybl2!0.16!7.58!Mybl2;;chr4:151401741..151401793,-!p1@Zbtb48!0.16!4.86!Zbtb48;;chr17:23004042..23004077,-!p2@Zfp945!0.16!4.28!Zfp945;;chr7:28764153..28764173,-!p2@Zfp780b!0.16!3.69!Zfp780b;;chrX:92907025..92907051,+!p1@Zc3h12b!0.16!2.92!Zc3h12b;;chr6:133985971..133985991,+!p6@Etv6!0.16!2.72!Etv6;;chr6:124959016..124959061,+!p3@Zfp384!0.16!2.72!Zfp384;;chr3:135354452..135354475,-!p5@Nfkb1!0.16!2.53!Nfkb1;;chr6:92042363..92042413,+!p3@Nr2c2!0.16!2.33!Nr2c2;;chr2:31428221..31428244,+!p2@Fubp3!0.16!2.33!Fubp3;;chr1:170361730..170361769,-!p7@Pbx1!0.16!2.14!Pbx1;;chr7:49761111..49761128,-!p2@ENSMUST00000174407,p2@uc009gmb.1!0.16!1.94!Zfp141;;chr9:63869729..63869749,-!p4@Smad6!0.16!1.75!Smad6;;chrX:137135036..137135064,-!p4@Tsc22d3!0.16!1.75!Tsc22d3;;chr2:48805633..48805648,+!p5@Mbd5!0.16!1.75!Mbd5;;chr13:67229127..67229153,+!p2@Zfp759!0.16!1.75!Zfp759;;chr13:96095124..96095144,+!p3@Zbed3!0.16!1.75!Zbed3;;chr2:160698668..160698679,-!p4@Zhx3!0.16!1.56!Zhx3;;chr4:102787521..102787588,+!p4@Mier1!0.16!1.56!Mier1;;chr3:54611738..54611749,-!p3@Rfxap!0.16!1.56!Rfxap;;chr9:72122708..72122720,+!p3@Zfp280d!0.16!1.56!Zfp280d;;chr6:146744563..146744594,+!p1@Arntl2!0.16!1.56!Arntl2;;chr7:134519511..134519534,-!p2@Zfp747!0.16!1.56!Zfp747;;chr5:138187583..138187602,+!p6@Tsc22d4!0.16!1.56!Tsc22d4;;chr7:134169999..134170010,-!p13@Maz!0.16!1.36!Maz;;chr2:127347067..127347093,-!p1@Kcnip3!0.16!1.36!Kcnip3;;chr3:103772552..103772584,+!p2@Phtf1!0.16!1.17!Phtf1;;chr8:124984566..124984595,-!p1@Snai3!0.16!1.17!Snai3;;chr11:52096750..52096772,-!p4@Tcf7!0.16!1.17!Tcf7;;chr2:154395552..154395561,-!p3@E2f1!0.16!0.97!E2f1;;chr1:165243653..165243664,-!p4@Prrx1!0.16!0.97!Prrx1;;chr7:13421299..13421303,+!p3@Zfp110!0.16!0.97!Zfp110;;chr13:78338076..78338104,-!p4@Nr2f1!0.16!0.78!Nr2f1;;chr15:81633224..81633235,+!p5@Tef!0.16!0.78!Tef;;chr17:71202982..71202985,-!p7@Tgif1!0.16!0.78!Tgif1;;chr18:61336630..61336641,-!p3@Hmgxb3!0.16!0.78!Hmgxb3;;chr10:88996336..88996380,-!p2@Nr1h4!0.16!0.78!Nr1h4;;chr3:100773602..100773607,-!p2@Ttf2!0.16!0.78!Ttf2;;chr2:74550178..74550214,+!p5@Hoxd3!0.16!0.58!Hoxd3;;chr14:22806778..22806795,-!p5@Zfp503!0.16!0.58!Zfp503;;chr17:57170891..57170961,-!p1@Khsrp!0.15!112.98!Khsrp;;chr12:75008961..75009002,+!p1@Hif1a!0.15!77.39!Hif1a;;chr13:58503810..58503833,-!p2@Hnrnpk!0.15!66.50!Hnrnpk;;chr4:82151178..82151262,-!p1@Nfib!0.15!50.95!Nfib;;chr9:32503590..32503680,+!p1@Ets1!0.15!46.47!Ets1;;chr13:56804344..56804473,+!p1@Smad5!0.15!37.92!Smad5;;chr6:64992569..64992656,+!p1@Smarcad1!0.15!37.53!Smarcad1;;chr9:20757246..20757278,-!p1@Dnmt1!0.15!36.56!Dnmt1;;chr11:98798983..98799049,+!p1@Rara!0.15!31.50!Rara;;chr5:111082367..111082441,-!p1@Noc4l!0.15!28.97!Noc4l;;chr2:84877326..84877362,+!p2@Ssrp1!0.15!27.22!Ssrp1;; | |expression_enrichment_score=chr1:140739014..140739032,-!p1@Lhx9!2.32!261.15!Lhx9;;chr10:22539932..22539956,-!p1@Tcf21!2.17!377.82!Tcf21;;chr2:38570011..38570034,-!p1@Nr5a1!2.10!125.62!Nr5a1;;chrX:90531838..90531861,+!p1@Arx!2.09!152.84!Arx;;chr7:147129712..147129774,+!p1@Utf1!1.99!96.45!Utf1;;chr14:63864056..63864102,-!p1@Gata4!1.96!154.01!Gata4;;chr1:168168856..168168893,-!p1@Mael!1.69!48.22!Mael;;chr15:102828658..102828678,+!p1@Hoxc6!1.65!43.17!Hoxc6;;chr1:168168817..168168850,-!p2@Mael!1.62!40.45!Mael;;chr2:74529970..74529997,+!p1@Hoxd10!1.42!25.08!Hoxd10;;chr2:74549968..74549996,+!p1@Hoxd3!1.35!26.45!Hoxd3;;chr2:104966766..104966786,+!p1@Wt1!1.34!32.67!Wt1;;chr15:35225845..35225867,+!p1@Osr2!1.30!47.25!Osr2;;chr2:104966874..104966907,+!p2@Wt1!1.29!18.47!Wt1;;chr2:74536026..74536039,+!p1@Hoxd9!1.29!18.47!Hoxd9;;chr12:3891810..3891829,+!p2@Dnmt3a!1.25!26.25!Dnmt3a;;chr2:180377386..180377462,-!p1@Tcfl5!1.23!19.06!Tcfl5;;chr12:34642510..34642530,+!p1@Twist1!1.22!49.00!Twist1;;chr10:126778916..126778974,-!p1@Gli1!1.21!34.22!Gli1;;chr19:25580110..25580163,+!p1@Dmrt1!1.18!14.19!Dmrt1;;chrX:83437105..83437121,+!p1@Nr0b1!1.18!14.00!Nr0b1;;chr11:85646303..85646329,+!p1@Tbx2!1.17!90.03!Tbx2;;chr17:25707623..25707639,-!p1@Sox8!1.17!58.34!Sox8;;chr2:152758901..152758925,-!p1@Foxs1!1.12!54.25!Foxs1;;chr17:35642997..35643014,+!p1@Pou5f1!1.11!11.86!Pou5f1;;chr17:35642973..35642994,+!p2@Pou5f1!1.07!10.69!Pou5f1;;chr15:102828642..102828653,+!p2@Hoxc6!1.05!10.31!Hoxc6;;chr2:104966933..104966966,+!p3@Wt1!1.05!10.11!Wt1;;chr2:74536050..74536065,+!p2@Hoxd9!1.05!10.11!Hoxd9;;chr12:3891753..3891801,+!p4@Dnmt3a!1.04!16.33!Dnmt3a;;chr5:31271028..31271040,+!p1@Tcf23!1.04!9.92!Tcf23;;chr2:74550015..74550057,+!p2@Hoxd3!1.02!9.53!Hoxd3;;chr11:85646263..85646278,+!p2@Tbx2!0.99!22.75!Tbx2;;chr19:59533221..59533271,+!p1@Emx2!0.98!10.69!Emx2;;chr14:63890660..63890687,-!p7@Gata4!0.98!8.56!Gata4;;chr14:63890491..63890516,-!p2@Gata4!0.98!8.56!Gata4;;chrX:45245679..45245702,-!p1@Smarca1!0.94!35.97!Smarca1;;chr2:38567715..38567730,-!p2@Nr5a1!0.92!7.39!Nr5a1;;chr2:74529998..74530020,+!p2@Hoxd10!0.92!7.39!Hoxd10;;chr10:12810631..12810649,+!p1@Plagl1!0.91!194.06!Plagl1;;chr14:63890459..63890484,-!p4@Gata4!0.91!7.19!Gata4;;chr7:6615049..6615056,-!p1@uc009fbu.1!0.91!7.19!Zim2;;chr1:38684260..38684312,-!p2@Aff3!0.90!50.75!Aff3;;chr4:133109285..133109308,+!p1@Nr0b2!0.90!7.00!Nr0b2;;chr7:6649134..6649167,-!p1@Zim1!0.89!38.31!Zim1;;chr15:75578748..75578752,-!p1@Mafa!0.89!6.81!Mafa;;chr4:122911086..122911112,+!p1@Heyl!0.88!81.09!Heyl;;chr2:152758938..152758954,-!p2@Foxs1!0.88!9.33!Foxs1;;chr1:140739042..140739054,-!p2@Lhx9!0.88!6.61!Lhx9;;chr14:63864337..63864381,-!p6@Gata4!0.88!6.61!Gata4;;chr8:26958093..26958148,-!p2@Ash2l!0.88!6.61!Ash2l;;chr10:77512581..77512592,+!p3@Dnmt3l!0.88!6.61!Dnmt3l;;chr2:104966465..104966479,+!p6@Wt1!0.87!6.42!Wt1;;chr2:104966662..104966673,+!p4@Wt1!0.85!6.03!Wt1;;chr19:25580226..25580261,+!p2@Dmrt1!0.85!6.03!Dmrt1;;chr11:85646341..85646352,+!p3@Tbx2!0.84!12.06!Tbx2;;chr2:169458799..169458832,+!p5@Tshz2!0.83!9.92!Tshz2;;chr1:120879128..120879183,-!p3@Gli2!0.82!11.08!Gli2;;chr2:74536071..74536083,+!p4@Hoxd9!0.81!5.44!Hoxd9;;chr7:147129777..147129814,+!p2@Utf1!0.81!5.44!Utf1;;chr2:74535796..74535808,+!p3@Hoxd9!0.80!5.25!Hoxd9;;chr2:169458192..169458247,+!p1@Tshz2!0.79!50.36!Tshz2;;chr7:17647736..17647772,-!p1@Hif3a!0.79!19.83!Hif3a;;chr2:91864300..91864379,-!p2@Creb3l1!0.79!15.75!Creb3l1;;chr10:80809447..80809515,-!p5@Hmg20b!0.79!6.42!Hmg20b;;chr9:36954842..36954908,-!p1@Pknox2!0.77!63.00!Pknox2;;chr7:147129680..147129693,+!p3@Utf1!0.77!4.86!Utf1;;chr11:98826125..98826141,+!p12@Rara!0.77!4.86!Rara;;chr7:77511403..77511450,-!p3@Nr2f2!0.75!10.50!Nr2f2;;chr2:91864449..91864492,-!p3@Creb3l1!0.75!7.97!Creb3l1;;chr2:25702844..25702859,-!p1@Sohlh1!0.75!4.67!Sohlh1;;chr12:77278238..77278252,-!p1@Esr2!0.75!4.67!Esr2;;chr4:119960301..119960359,-!p1@Foxo6!0.74!15.75!Foxo6;;chr18:11052485..11052508,+!p2@Gata6!0.74!13.61!Gata6;;chr15:35225873..35225889,+!p2@Osr2!0.74!4.47!Osr2;;chr2:105003277..105003280,+!p5@Wt1!0.74!4.47!Wt1;;chr7:77505617..77505632,-!p1@Nr2f2!0.73!227.12!Nr2f2;;chr11:52096804..52096896,-!p1@Tcf7!0.73!39.47!Tcf7;;chr2:30700788..30700824,+!p2@Prrx2!0.73!7.00!Prrx2;;chrX:45245644..45245666,-!p2@Smarca1!0.71!14.58!Smarca1;;chr4:84320893..84320910,-!p1@Bnc2!0.71!9.92!Bnc2;;chr2:74549945..74549965,+!p4@Hoxd3!0.71!4.08!Hoxd3;;chr2:152223441..152223465,-!p2@Sox12!0.70!18.47!Sox12;;chr12:34642682..34642753,+!p2@Twist1!0.70!11.67!Twist1;;chr18:11052456..11052477,+!p3@Gata6!0.69!13.42!Gata6;;chr11:5761889..5761969,+!p1@Aebp1!0.67!178.31!Aebp1;;chr2:169458519..169458555,+!p2@Tshz2!0.67!16.72!Tshz2;;chr2:74542918..74542971,+!p1@Hoxd8!0.67!5.83!Hoxd8;;chr4:3865501..3865548,-!p1@Plag1!0.66!21.20!Plag1;;chr2:181194069..181194144,-!p1@Zbtb46!0.65!22.95!Zbtb46;;chr11:5761979..5761992,+!p2@Aebp1!0.65!7.78!Aebp1;;chr11:98826178..98826197,+!p7@Rara!0.65!3.50!Rara;;chr14:63890519..63890539,-!p3@Gata4!0.65!3.50!Gata4;;chr14:63890691..63890718,-!p8@Gata4!0.65!3.50!Gata4;;chr9:44249274..44249313,-!p1@Foxr1!0.65!3.50!Foxr1;;chr15:76701495..76701535,-!p3@Zfp251!0.65!3.50!Zfp251;;chr5:31270977..31270988,+!p3@Tcf23!0.65!3.50!Tcf23;;chr1:38684383..38684394,-!p4@Aff3!0.64!4.86!Aff3;;chr7:52471143..52471186,+!p1@Tead2!0.63!40.64!Tead2;;chr10:5734525..5734569,-!p3@Esr1!0.63!5.83!Esr1;;chr7:89137163..89137200,-!p1@Bnc1!0.63!4.08!Bnc1;;chr1:120949949..120950000,-!p1@Gli2!0.62!16.14!Gli2;;chr15:81633203..81633215,+!p3@Tef!0.62!5.44!Tef;;chr15:103164702..103164778,-!p3@Zfp385a!0.62!3.89!Zfp385a;;chr14:76904313..76904328,+!p1@Tsc22d1!0.61!711.50!Tsc22d1;;chr11:74981654..74981658,-!p1@Hic1!0.61!14.19!Hic1;;chr7:19679964..19679982,+!p1@Six5!0.61!10.11!Six5;;chr7:77511622..77511657,-!p5@Nr2f2!0.61!4.08!Nr2f2;;chr2:74543202..74543213,+!p3@Hoxd8!0.61!3.11!Hoxd8;;chr2:104966436..104966455,+!p7@Wt1!0.61!3.11!Wt1;;chr15:40486566..40486600,+!p1@Zfpm2!0.60!21.00!Zfpm2;;chr8:90483459..90483475,-!p1@Zfp423!0.60!9.53!Zfp423;;chr17:47278081..47278103,+!p1@Trerf1!0.60!7.78!Trerf1;;chr8:90483433..90483457,-!p2@Zfp423!0.60!4.28!Zfp423;;chr6:52176164..52176195,-!p1@Hoxa9!0.60!3.89!Hoxa9;;chr10:126779021..126779032,-!p2@Gli1!0.60!3.89!Gli1;;chr18:11052642..11052659,+!p1@Gata6!0.59!17.31!Gata6;;chr19:25580272..25580305,+!p3@Dmrt1!0.59!2.92!Dmrt1;;chrX:35419715..35419724,+!p1@Rhox10!0.59!2.92!Rhox10;;chr2:74542974..74542986,+!p5@Hoxd8!0.59!2.92!Hoxd8;;chr4:84321280..84321298,-!p5@Bnc2!0.59!2.92!Bnc2;;chr16:14705925..14705951,+!p1@Snai2!0.58!23.92!Snai2;;chr14:65977324..65977372,+!p2@Zfp395!0.58!19.25!Zfp395;;chr2:169458352..169458397,+!p3@Tshz2!0.58!8.17!Tshz2;;chr15:40486427..40486437,+!p5@Zfpm2!0.58!3.89!Zfpm2;;chr10:5636374..5636421,-!p1@Esr1!0.58!3.69!Esr1;;chr15:81633165..81633188,+!p2@Tef!0.57!27.61!Tef;;chr13:22036953..22037009,+!p1@Zfp184!0.57!8.56!Zfp184;;chr16:55966407..55966447,+!p6@Rpl24,p6@Zbtb11!0.57!7.58!Zbtb11;;chr1:120949925..120949947,-!p4@Gli2!0.57!6.03!Gli2;;chr11:85646469..85646488,+!p5@Tbx2!0.57!4.47!Tbx2;;chr15:40486883..40486903,+!p4@Zfpm2!0.57!3.89!Zfpm2;;chr14:69808725..69808748,+!p1@Nkx3-1!0.57!2.72!Nkx3-1;;chr2:104966909..104966920,+!p8@Wt1!0.57!2.72!Wt1;;chr3:130815472..130815497,+!p6@Lef1!0.57!2.72!Lef1;;chr2:74543397..74543435,+!p2@Hoxd8!0.57!2.72!Hoxd8;;chr4:84321317..84321332,-!p4@Bnc2!0.57!2.72!Bnc2;;chr2:25562346..25562433,+!p1@Bmyc!0.56!60.67!Bmyc;;chr19:26822880..26822964,+!p2@Smarca2!0.56!27.81!Smarca2;;chr2:152223469..152223512,-!p1@Sox12!0.56!16.72!Sox12;;chr5:125538737..125538781,-!p2@Ncor2!0.56!11.47!Ncor2;;chr2:152223783..152223812,-!p4@Sox12!0.56!7.00!Sox12;;chr17:37139472..37139514,+!p1@Zfp57!0.55!21.39!Zfp57;;chr14:56443806..56443848,+!p1@Nfatc4!0.55!5.83!Nfatc4;;chr7:17642053..17642066,-!p2@Hif3a!0.55!3.89!Hif3a;;chr4:84321300..84321315,-!p2@Bnc2!0.55!3.31!Bnc2;;chr2:74529942..74529953,+!p4@Hoxd10!0.55!2.53!Hoxd10;;chr2:24331085..24331100,-!p1@Pax8!0.55!2.53!Pax8;;chr5:31271010..31271019,+!p2@Tcf23!0.55!2.53!Tcf23;;chr15:102820964..102821006,+!p1@Hoxc8!0.55!2.53!Hoxc8;;chr13:83712735..83712761,+!p9@Mef2c!0.55!2.53!Mef2c;;chr15:102821007..102821021,+!p2@Hoxc8!0.55!2.53!Hoxc8;;chr2:91864661..91864686,-!p1@Creb3l1!0.54!68.64!Creb3l1;;chr12:9581262..9581282,+!p1@Osr1!0.54!37.33!Osr1;;chr7:37483021..37483078,+!p1@Tshz3!0.54!9.14!Tshz3;;chr16:14705961..14705978,+!p2@Snai2!0.53!14.00!Snai2;;chr12:12948633..12948651,-!p1@Mycn!0.52!28.78!Mycn;;chr4:128483534..128483613,-!p1@Zfp362!0.52!20.61!Zfp362;;chr12:28027561..28027591,-!p1@Sox11!0.52!19.45!Sox11;;chr2:130120884..130120972,+!p1@Ebf4!0.52!17.11!Ebf4;;chr8:59799772..59799789,+!p1@Hand2!0.52!7.97!Hand2;;chr1:9690424..9690467,-!p1@Mybl1!0.52!5.64!Mybl1;;chr4:122911056..122911065,+!p2@Heyl!0.52!3.89!Heyl;;chr15:50720589..50720600,-!p12@Trps1!0.52!3.31!Trps1;;chr6:72850124..72850210,-!p7@Kcmf1!0.52!3.31!Kcmf1;;chr19:59533139..59533152,+!p2@Emx2!0.52!2.33!Emx2;;chr15:102839948..102839975,+!p3@Hoxc6!0.52!2.33!Hoxc6;;chr2:74543103..74543135,+!p4@Hoxd8!0.52!2.33!Hoxd8;;chr4:62626594..62626651,+!p1@Zfp618!0.51!10.50!Zfp618;;chr2:169458838..169458859,+!p4@Tshz2!0.51!5.25!Tshz2;;chr7:26067619..26067702,+!p2@Cic!0.50!15.75!Cic;;chr17:28487603..28487626,-!p2@Tead3!0.50!5.44!Tead3;;chr7:37483231..37483263,+!p2@Tshz3!0.50!3.69!Tshz3;;chr1:9690398..9690410,-!p2@Mybl1!0.50!2.72!Mybl1;;chr19:59533429..59533470,+!p4@Emx2!0.50!2.14!Emx2;;chr10:77512605..77512612,+!p7@Dnmt3l!0.50!2.14!Dnmt3l;;chr2:74543235..74543246,+!p7@Hoxd8!0.50!2.14!Hoxd8;;chr2:74560109..74560131,+!p1@Hoxd4!0.50!2.14!Hoxd4;;chr14:32979060..32979091,+!p4@Gm6768,p4@Ncoa4!0.50!2.14!Ncoa4;;chr12:30525072..30525115,+!p14@Myt1l!0.50!2.14!Myt1l;;chrX:154006915..154006923,-!p1@Yy2!0.50!2.14!Yy2;;chr7:77511234..77511302,-!p2@Nr2f2!0.49!18.08!Nr2f2;;chr19:7342725..7342784,+!p1@Rcor2!0.49!11.08!Rcor2;;chr2:34227446..34227511,-!p1@Pbx3!0.49!5.83!Pbx3;;chr2:156666727..156666753,+!p2@Tgif2!0.49!3.50!Tgif2;;chr5:138187341..138187406,+!p3@Tsc22d4!0.48!28.97!Tsc22d4;;chr14:65977498..65977528,+!p1@Zfp395!0.48!17.70!Zfp395;;chr11:102177921..102177960,-!p9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ra;;chrX:137077134..137077143,-!p10@Tsc22d3!0.17!0.58!Tsc22d3;;chr4:154597177..154597195,-!p1@Ski!0.16!49.20!Ski;;chr12:114336410..114336478,+!p1@Mta1!0.16!41.61!Mta1;;chr7:30880169..30880211,+!p1@Zfp260!0.16!41.61!Zfp260;;chr1:15795720..15795756,+!p1@Terf1!0.16!37.92!Terf1;;chr2:27532754..27532815,+!p1@Rxra!0.16!37.33!Rxra;;chr7:26035739..26035757,-!p1@Erf!0.16!31.70!Erf;;chrX:20527671..20527719,-!p1@Elk1!0.16!28.97!Elk1;;chr1:72629819..72629856,+!p1@Smarcal1!0.16!23.92!Smarcal1;;chr9:96096707..96096772,+!p1@Tfdp2!0.16!19.25!Tfdp2;;chr16:84835146..84835186,+!p2@Gabpa!0.16!17.11!Gabpa;;chr3:9610090..9610124,-!p1@Zfp704!0.16!16.72!Zfp704;;chr5:143942400..143942474,-!p1@Rbak!0.16!13.03!Rbak;;chr7:13483149..13483234,+!p1@Zscan22!0.16!12.06!Zscan22;;chr2:91489908..91489941,-!p1@Zfp408!0.16!9.92!Zfp408;;chr4:97444590..97444607,+!p6@Nfia!0.16!8.75!Nfia;;chr2:162880387..162880413,+!p1@Mybl2!0.16!7.58!Mybl2;;chr4:151401741..151401793,-!p1@Zbtb48!0.16!4.86!Zbtb48;;chr17:23004042..23004077,-!p2@Zfp945!0.16!4.28!Zfp945;;chr7:28764153..28764173,-!p2@Zfp780b!0.16!3.69!Zfp780b;;chrX:92907025..92907051,+!p1@Zc3h12b!0.16!2.92!Zc3h12b;;chr6:133985971..133985991,+!p6@Etv6!0.16!2.72!Etv6;;chr6:124959016..124959061,+!p3@Zfp384!0.16!2.72!Zfp384;;chr3:135354452..135354475,-!p5@Nfkb1!0.16!2.53!Nfkb1;;chr6:92042363..92042413,+!p3@Nr2c2!0.16!2.33!Nr2c2;;chr2:31428221..31428244,+!p2@Fubp3!0.16!2.33!Fubp3;;chr1:170361730..170361769,-!p7@Pbx1!0.16!2.14!Pbx1;;chr7:49761111..49761128,-!p2@ENSMUST00000174407,p2@uc009gmb.1!0.16!1.94!Zfp141;;chr9:63869729..63869749,-!p4@Smad6!0.16!1.75!Smad6;;chrX:137135036..137135064,-!p4@Tsc22d3!0.16!1.75!Tsc22d3;;chr2:48805633..48805648,+!p5@Mbd5!0.16!1.75!Mbd5;;chr13:67229127..67229153,+!p2@Zfp759!0.16!1.75!Zfp759;;chr13:96095124..96095144,+!p3@Zbed3!0.16!1.75!Zbed3;;chr2:160698668..160698679,-!p4@Zhx3!0.16!1.56!Zhx3;;chr4:102787521..102787588,+!p4@Mier1!0.16!1.56!Mier1;;chr3:54611738..54611749,-!p3@Rfxap!0.16!1.56!Rfxap;;chr9:72122708..72122720,+!p3@Zfp280d!0.16!1.56!Zfp280d;;chr6:146744563..146744594,+!p1@Arntl2!0.16!1.56!Arntl2;;chr7:134519511..134519534,-!p2@Zfp747!0.16!1.56!Zfp747;;chr5:138187583..138187602,+!p6@Tsc22d4!0.16!1.56!Tsc22d4;;chr7:134169999..134170010,-!p13@Maz!0.16!1.36!Maz;;chr2:127347067..127347093,-!p1@Kcnip3!0.16!1.36!Kcnip3;;chr3:103772552..103772584,+!p2@Phtf1!0.16!1.17!Phtf1;;chr8:124984566..124984595,-!p1@Snai3!0.16!1.17!Snai3;;chr11:52096750..52096772,-!p4@Tcf7!0.16!1.17!Tcf7;;chr2:154395552..154395561,-!p3@E2f1!0.16!0.97!E2f1;;chr1:165243653..165243664,-!p4@Prrx1!0.16!0.97!Prrx1;;chr7:13421299..13421303,+!p3@Zfp110!0.16!0.97!Zfp110;;chr13:78338076..78338104,-!p4@Nr2f1!0.16!0.78!Nr2f1;;chr15:81633224..81633235,+!p5@Tef!0.16!0.78!Tef;;chr17:71202982..71202985,-!p7@Tgif1!0.16!0.78!Tgif1;;chr18:61336630..61336641,-!p3@Hmgxb3!0.16!0.78!Hmgxb3;;chr10:88996336..88996380,-!p2@Nr1h4!0.16!0.78!Nr1h4;;chr3:100773602..100773607,-!p2@Ttf2!0.16!0.78!Ttf2;;chr2:74550178..74550214,+!p5@Hoxd3!0.16!0.58!Hoxd3;;chr14:22806778..22806795,-!p5@Zfp503!0.16!0.58!Zfp503;;chr17:57170891..57170961,-!p1@Khsrp!0.15!112.98!Khsrp;;chr12:75008961..75009002,+!p1@Hif1a!0.15!77.39!Hif1a;;chr13:58503810..58503833,-!p2@Hnrnpk!0.15!66.50!Hnrnpk;;chr4:82151178..82151262,-!p1@Nfib!0.15!50.95!Nfib;;chr9:32503590..32503680,+!p1@Ets1!0.15!46.47!Ets1;;chr13:56804344..56804473,+!p1@Smad5!0.15!37.92!Smad5;;chr6:64992569..64992656,+!p1@Smarcad1!0.15!37.53!Smarcad1;;chr9:20757246..20757278,-!p1@Dnmt1!0.15!36.56!Dnmt1;;chr11:98798983..98799049,+!p1@Rara!0.15!31.50!Rara;;chr5:111082367..111082441,-!p1@Noc4l!0.15!28.97!Noc4l;;chr2:84877326..84877362,+!p2@Ssrp1!0.15!27.22!Ssrp1;; | ||
Line 44: | Line 45: | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11033 | |library_id=CNhs11033 | ||
| | |library_id_phase_based=2:CNhs11033 | ||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;470 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;470 | |||
|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/testis%252c%2520embryo%2520E16.CNhs11033.470-26G5.mm10.nobarcode.bam | |||
|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/testis%252c%2520embryo%2520E16.CNhs11033.470-26G5.mm10.nobarcode.ctss.bed.gz | |||
|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/testis%252c%2520embryo%2520E16.CNhs11033.470-26G5.mm9.nobarcode.bam | |||
|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/testis%252c%2520embryo%2520E16.CNhs11033.470-26G5.mm9.ctss.bed.gz | |||
|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/testis%252c%2520embryo%2520E16.CNhs11033.470-26G5.mm9.nobarcode.rdna.fa.gz | |||
|name=testis, embryo E16 | |name=testis, embryo E16 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 50: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11033,LSID732,release008,COMPLETED | |profile_hcage=CNhs11033,LSID732,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|repeat_enrich_byfamily=-0.0464597358026166,0,0,0,0.0771684068561175,0,-0.00847950629557195,0,0.0054773605742938,0,0,0.323155254622498,0,0,0,0,0,0,0.0579907121703936,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0355335033535007,0,0.142671721075526,0,0,0.00877032694715313,0.145139934744884,0.0648703845393668,-0.167976697156123,0.213848576162502,0.199144673371508,0,0,0,0,0,0,0,0,0,0,0,0.199577904247741,0.1335723566843,0.0771684068561175,0,0,0,-0.0428469550828748,0,-0.00575453392430265,0,0,0.00221372931839045,0.0660749550892359,-0.0156873842270003,-0.080922635914965,0.115576165236432,0,0.0771684068561175,0.0152132736318376,0.108332862260126,0.142671721075526,0,0.0209149751458576,0.03467687860968,-0.396336976492829,0.0638401262356187,0,0,0,0,0,0,-0.166362444370259,-0.247730463716719,-0.0021139438691129,0,0,0,0,0 | |repeat_enrich_byfamily=-0.0464597358026166,0,0,0,0.0771684068561175,0,-0.00847950629557195,0,0.0054773605742938,0,0,0.323155254622498,0,0,0,0,0,0,0.0579907121703936,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0355335033535007,0,0.142671721075526,0,0,0.00877032694715313,0.145139934744884,0.0648703845393668,-0.167976697156123,0.213848576162502,0.199144673371508,0,0,0,0,0,0,0,0,0,0,0,0.199577904247741,0.1335723566843,0.0771684068561175,0,0,0,-0.0428469550828748,0,-0.00575453392430265,0,0,0.00221372931839045,0.0660749550892359,-0.0156873842270003,-0.080922635914965,0.115576165236432,0,0.0771684068561175,0.0152132736318376,0.108332862260126,0.142671721075526,0,0.0209149751458576,0.03467687860968,-0.396336976492829,0.0638401262356187,0,0,0,0,0,0,-0.166362444370259,-0.247730463716719,-0.0021139438691129,0,0,0,0,0 | ||
Line 87: | Line 97: | ||
|top_motifs=ZNF238:1.71318797065;NRF1:1.59805739667;NFY{A,B,C}:1.59117764862;HIF1A:1.56853702536;ZNF143:1.49677732259;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.40205623801;SP1:1.22952395609;TEF:1.14291699078;MYBL2:1.12999524618;RXR{A,B,G}:1.05634633607;HOX{A5,B5}:1.05066113214;XCPE1{core}:1.03893714315;GFI1B:1.03267403354;GFI1:1.01525283632;FOXP3:1.00777249271;EGR1..3:0.99354669202;ZNF384:0.967524090029;PATZ1:0.951173117978;STAT1,3:0.918099007759;E2F1..5:0.878776175253;GLI1..3:0.855769735349;EP300:0.793521237051;GATA4:0.785884758185;RBPJ:0.783244577348;TFAP2{A,C}:0.769967702062;FOXP1:0.744596414337;CRX:0.743305267722;NANOG{mouse}:0.736353161316;GCM1,2:0.718290607591;NKX3-1:0.642050144347;IKZF1:0.624488707762;NKX6-1,2:0.616332136108;ZNF423:0.606074680575;ZBTB16:0.605704640422;NR5A1,2:0.564422147618;TEAD1:0.556073052082;PITX1..3:0.548915545989;TLX1..3_NFIC{dimer}:0.545162837693;FOXD3:0.531531396909;NR1H4:0.523335025329;NR6A1:0.509230346986;RREB1:0.499142649137;ELK1,4_GABP{A,B1}:0.46798703633;IKZF2:0.456518794077;GTF2I:0.435007481622;ZIC1..3:0.401066237272;SOX5:0.39495887861;SOX17:0.390269764325;ESR1:0.381477236904;CDC5L:0.378740399396;BREu{core}:0.355407396208;TFDP1:0.338772124745;MZF1:0.333061137833;RFX2..5_RFXANK_RFXAP:0.318208589763;TOPORS:0.3050309949;YY1:0.29872637927;MAZ:0.284751806824;bHLH_family:0.2844677815;HBP1_HMGB_SSRP1_UBTF:0.249718828589;TFAP4:0.246196567573;ZFP161:0.243039725241;AIRE:0.237761702544;EN1,2:0.233670285453;ADNP_IRX_SIX_ZHX:0.218020736214;ESRRA:0.204234992245;MTE{core}:0.194357193528;MYB:0.190348258504;PRRX1,2:0.189208141623;PBX1:0.189175613306;NFATC1..3:0.182917539294;HSF1,2:0.180795877316;CREB1:0.168508649575;RFX1:0.161346559996;MED-1{core}:0.147636743924;POU2F1..3:0.143927348925;SOX2:0.131470622227;ATF2:0.130554816707;MTF1:0.125519990963;LEF1_TCF7_TCF7L1,2:0.112165649685;NFIX:0.104372014007;PAX5:0.097691006642;PAX4:0.093352895065;GATA6:0.090125006963;AHR_ARNT_ARNT2:0.0847424639413;TFAP2B:0.0830847131073;HIC1:0.071597193187;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0492949544536;ARID5B:0.0475230785938;DBP:0.0186642102252;TAL1_TCF{3,4,12}:0.0119432580566;HOXA9_MEIS1:-0.0190240387859;GTF2A1,2:-0.0368998943114;SPZ1:-0.0370860562931;KLF4:-0.0523296304429;SRF:-0.0854210546632;EVI1:-0.101079617112;PAX1,9:-0.113313537984;HES1:-0.120338847785;SOX{8,9,10}:-0.122776339616;T:-0.124035750818;FOXL1:-0.129943437708;REST:-0.139831089857;ZNF148:-0.153758145023;BPTF:-0.160390549278;FOXN1:-0.161848797728;SPIB:-0.18893441236;PAX6:-0.201132840239;POU5F1:-0.208209274588;ELF1,2,4:-0.213040732506;HMGA1,2:-0.223004695251;RUNX1..3:-0.225217173569;MEF2{A,B,C,D}:-0.231744075176;TFCP2:-0.232076999893;RORA:-0.247495133614;MYFfamily:-0.251561315918;ATF4:-0.256691202232;STAT5{A,B}:-0.263495531245;TBX4,5:-0.263901085708;POU6F1:-0.278059511732;UFEwm:-0.286955924571;SREBF1,2:-0.306059646266;ALX4:-0.314206179836;CUX2:-0.323766102685;ETS1,2:-0.355468146447;NKX2-2,8:-0.364633559342;NKX2-1,4:-0.367081147289;NKX2-3_NKX2-5:-0.391775338921;HOX{A4,D4}:-0.4194019557;FOX{D1,D2}:-0.420071050228;FOXQ1:-0.421418871029;PRDM1:-0.43006260266;SMAD1..7,9:-0.459242209535;ONECUT1,2:-0.462884422014;HLF:-0.493001009527;BACH2:-0.500745626452;HNF4A_NR2F1,2:-0.514121707372;SPI1:-0.527213614342;FOXA2:-0.531705533302;HAND1,2:-0.53893789241;CDX1,2,4:-0.540697386939;VSX1,2:-0.551262244181;TBP:-0.568376984656;NFKB1_REL_RELA:-0.575712555512;NKX3-2:-0.588502742457;AR:-0.604600784486;POU1F1:-0.605135737896;POU3F1..4:-0.631295496677;HMX1:-0.631343273167;FOXO1,3,4:-0.632709813068;TP53:-0.633197425782;PAX2:-0.652374701532;MAFB:-0.667947916955;LHX3,4:-0.670474464869;NANOG:-0.674818201922;ALX1:-0.676828786832;HNF1A:-0.689712112765;NHLH1,2:-0.719765217739;CEBPA,B_DDIT3:-0.721365386271;NFE2L2:-0.746613593596;PDX1:-0.750011725066;ATF6:-0.758478581644;ZBTB6:-0.769323208782;PAX8:-0.788634003679;GZF1:-0.805251132994;RXRA_VDR{dimer}:-0.805287354807;EBF1:-0.808254525451;DMAP1_NCOR{1,2}_SMARC:-0.811612410404;OCT4_SOX2{dimer}:-0.814960917863;LMO2:-0.818774334515;JUN:-0.820486966023;NFE2:-0.841445434759;PPARG:-0.860240716448;TGIF1:-0.861699279147;IRF1,2:-0.875993529898;IRF7:-0.944472285486;FOX{F1,F2,J1}:-0.95508881045;FOS_FOS{B,L1}_JUN{B,D}:-0.957682633686;FOXM1:-0.989024126232;NFIL3:-0.999805470176;SNAI1..3:-1.00515793743;STAT2,4,6:-1.13012401213;FOSL2:-1.17202186054;ZEB1:-1.2236799585;TLX2:-1.29693315827;ATF5_CREB3:-1.38508990236;FOX{I1,J2}:-1.41393813098;MYOD1:-1.47340657852;NFE2L1:-1.49023379139;NR3C1:-1.63043064071 | |top_motifs=ZNF238:1.71318797065;NRF1:1.59805739667;NFY{A,B,C}:1.59117764862;HIF1A:1.56853702536;ZNF143:1.49677732259;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.40205623801;SP1:1.22952395609;TEF:1.14291699078;MYBL2:1.12999524618;RXR{A,B,G}:1.05634633607;HOX{A5,B5}:1.05066113214;XCPE1{core}:1.03893714315;GFI1B:1.03267403354;GFI1:1.01525283632;FOXP3:1.00777249271;EGR1..3:0.99354669202;ZNF384:0.967524090029;PATZ1:0.951173117978;STAT1,3:0.918099007759;E2F1..5:0.878776175253;GLI1..3:0.855769735349;EP300:0.793521237051;GATA4:0.785884758185;RBPJ:0.783244577348;TFAP2{A,C}:0.769967702062;FOXP1:0.744596414337;CRX:0.743305267722;NANOG{mouse}:0.736353161316;GCM1,2:0.718290607591;NKX3-1:0.642050144347;IKZF1:0.624488707762;NKX6-1,2:0.616332136108;ZNF423:0.606074680575;ZBTB16:0.605704640422;NR5A1,2:0.564422147618;TEAD1:0.556073052082;PITX1..3:0.548915545989;TLX1..3_NFIC{dimer}:0.545162837693;FOXD3:0.531531396909;NR1H4:0.523335025329;NR6A1:0.509230346986;RREB1:0.499142649137;ELK1,4_GABP{A,B1}:0.46798703633;IKZF2:0.456518794077;GTF2I:0.435007481622;ZIC1..3:0.401066237272;SOX5:0.39495887861;SOX17:0.390269764325;ESR1:0.381477236904;CDC5L:0.378740399396;BREu{core}:0.355407396208;TFDP1:0.338772124745;MZF1:0.333061137833;RFX2..5_RFXANK_RFXAP:0.318208589763;TOPORS:0.3050309949;YY1:0.29872637927;MAZ:0.284751806824;bHLH_family:0.2844677815;HBP1_HMGB_SSRP1_UBTF:0.249718828589;TFAP4:0.246196567573;ZFP161:0.243039725241;AIRE:0.237761702544;EN1,2:0.233670285453;ADNP_IRX_SIX_ZHX:0.218020736214;ESRRA:0.204234992245;MTE{core}:0.194357193528;MYB:0.190348258504;PRRX1,2:0.189208141623;PBX1:0.189175613306;NFATC1..3:0.182917539294;HSF1,2:0.180795877316;CREB1:0.168508649575;RFX1:0.161346559996;MED-1{core}:0.147636743924;POU2F1..3:0.143927348925;SOX2:0.131470622227;ATF2:0.130554816707;MTF1:0.125519990963;LEF1_TCF7_TCF7L1,2:0.112165649685;NFIX:0.104372014007;PAX5:0.097691006642;PAX4:0.093352895065;GATA6:0.090125006963;AHR_ARNT_ARNT2:0.0847424639413;TFAP2B:0.0830847131073;HIC1:0.071597193187;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0492949544536;ARID5B:0.0475230785938;DBP:0.0186642102252;TAL1_TCF{3,4,12}:0.0119432580566;HOXA9_MEIS1:-0.0190240387859;GTF2A1,2:-0.0368998943114;SPZ1:-0.0370860562931;KLF4:-0.0523296304429;SRF:-0.0854210546632;EVI1:-0.101079617112;PAX1,9:-0.113313537984;HES1:-0.120338847785;SOX{8,9,10}:-0.122776339616;T:-0.124035750818;FOXL1:-0.129943437708;REST:-0.139831089857;ZNF148:-0.153758145023;BPTF:-0.160390549278;FOXN1:-0.161848797728;SPIB:-0.18893441236;PAX6:-0.201132840239;POU5F1:-0.208209274588;ELF1,2,4:-0.213040732506;HMGA1,2:-0.223004695251;RUNX1..3:-0.225217173569;MEF2{A,B,C,D}:-0.231744075176;TFCP2:-0.232076999893;RORA:-0.247495133614;MYFfamily:-0.251561315918;ATF4:-0.256691202232;STAT5{A,B}:-0.263495531245;TBX4,5:-0.263901085708;POU6F1:-0.278059511732;UFEwm:-0.286955924571;SREBF1,2:-0.306059646266;ALX4:-0.314206179836;CUX2:-0.323766102685;ETS1,2:-0.355468146447;NKX2-2,8:-0.364633559342;NKX2-1,4:-0.367081147289;NKX2-3_NKX2-5:-0.391775338921;HOX{A4,D4}:-0.4194019557;FOX{D1,D2}:-0.420071050228;FOXQ1:-0.421418871029;PRDM1:-0.43006260266;SMAD1..7,9:-0.459242209535;ONECUT1,2:-0.462884422014;HLF:-0.493001009527;BACH2:-0.500745626452;HNF4A_NR2F1,2:-0.514121707372;SPI1:-0.527213614342;FOXA2:-0.531705533302;HAND1,2:-0.53893789241;CDX1,2,4:-0.540697386939;VSX1,2:-0.551262244181;TBP:-0.568376984656;NFKB1_REL_RELA:-0.575712555512;NKX3-2:-0.588502742457;AR:-0.604600784486;POU1F1:-0.605135737896;POU3F1..4:-0.631295496677;HMX1:-0.631343273167;FOXO1,3,4:-0.632709813068;TP53:-0.633197425782;PAX2:-0.652374701532;MAFB:-0.667947916955;LHX3,4:-0.670474464869;NANOG:-0.674818201922;ALX1:-0.676828786832;HNF1A:-0.689712112765;NHLH1,2:-0.719765217739;CEBPA,B_DDIT3:-0.721365386271;NFE2L2:-0.746613593596;PDX1:-0.750011725066;ATF6:-0.758478581644;ZBTB6:-0.769323208782;PAX8:-0.788634003679;GZF1:-0.805251132994;RXRA_VDR{dimer}:-0.805287354807;EBF1:-0.808254525451;DMAP1_NCOR{1,2}_SMARC:-0.811612410404;OCT4_SOX2{dimer}:-0.814960917863;LMO2:-0.818774334515;JUN:-0.820486966023;NFE2:-0.841445434759;PPARG:-0.860240716448;TGIF1:-0.861699279147;IRF1,2:-0.875993529898;IRF7:-0.944472285486;FOX{F1,F2,J1}:-0.95508881045;FOS_FOS{B,L1}_JUN{B,D}:-0.957682633686;FOXM1:-0.989024126232;NFIL3:-0.999805470176;SNAI1..3:-1.00515793743;STAT2,4,6:-1.13012401213;FOSL2:-1.17202186054;ZEB1:-1.2236799585;TLX2:-1.29693315827;ATF5_CREB3:-1.38508990236;FOX{I1,J2}:-1.41393813098;MYOD1:-1.47340657852;NFE2L1:-1.49023379139;NR3C1:-1.63043064071 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:470-26G5;search_select_hide=table117:470-26G5 | |||
}} | }} |
Latest revision as of 19:17, 4 June 2020
Name: | testis, embryo E16 |
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Species: | Mouse (Mus musculus) |
Library ID: | CNhs11033 |
Sample type: | developmental |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
CNhs11033
0 | 0 |
1 | 0 |
10 | 0 |
100 | 0 |
1000 | 0 |
1001 | -2.109203e-4 |
1002 | 0.645 |
1003 | 0.0233 |
1004 | 0 |
1005 | -0.0389 |
1006 | 0.0538 |
1007 | 0.16 |
1008 | 0 |
1009 | 0.18 |
101 | 0.0674 |
1010 | 0 |
1011 | 0.0703 |
1012 | 0 |
1013 | -0.156 |
1014 | 0.143 |
1015 | 0.152 |
1016 | 0.335 |
1017 | 0 |
1018 | 0.0772 |
1019 | 0 |
102 | 0 |
1020 | 0 |
1021 | -0.0487 |
1022 | 0.0723 |
1023 | 0 |
1024 | -0.0624 |
1025 | 0 |
1026 | 0.0477 |
1027 | 0 |
1028 | 0 |
1029 | -0.0196 |
103 | 0.248 |
1030 | 0 |
1031 | 0.437 |
1032 | 7.252914e-4 |
1033 | 0 |
1034 | 0 |
1035 | 0 |
1036 | 0.0663 |
1037 | 0 |
1038 | -0.0304 |
1039 | -0.0195 |
104 | 0 |
1040 | 0.105 |
1041 | 0 |
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11033
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11033
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.108 |
10 | 10 | 0.229 |
100 | 100 | 0.725 |
101 | 101 | 0.569 |
102 | 102 | 0.648 |
103 | 103 | 0.291 |
104 | 104 | 0.834 |
105 | 105 | 0.395 |
106 | 106 | 2.95835e-4 |
107 | 107 | 0.00349 |
108 | 108 | 0.722 |
109 | 109 | 0.697 |
11 | 11 | 0.343 |
110 | 110 | 0.792 |
111 | 111 | 0.415 |
112 | 112 | 0.431 |
113 | 113 | 0.397 |
114 | 114 | 0.035 |
115 | 115 | 0.613 |
116 | 116 | 0.478 |
117 | 117 | 0.642 |
118 | 118 | 0.909 |
119 | 119 | 0.169 |
12 | 12 | 0.463 |
120 | 120 | 0.463 |
121 | 121 | 0.51 |
122 | 122 | 0.716 |
123 | 123 | 0.127 |
124 | 124 | 0.119 |
125 | 125 | 0.0584 |
126 | 126 | 0.939 |
127 | 127 | 0.261 |
128 | 128 | 1.61625e-4 |
129 | 129 | 0.142 |
13 | 13 | 0.471 |
130 | 130 | 0.423 |
131 | 131 | 0.829 |
132 | 132 | 0.568 |
133 | 133 | 0.962 |
134 | 134 | 0.645 |
135 | 135 | 0.491 |
136 | 136 | 0.0657 |
137 | 137 | 0.852 |
138 | 138 | 0.538 |
139 | 139 | 0.0532 |
14 | 14 | 0.171 |
140 | 140 | 0.5 |
141 | 141 | 0.125 |
142 | 142 | 0.888 |
143 | 143 | 0.109 |
144 | 144 | 0.133 |
145 | 145 | 0.627 |
146 | 146 | 0.429 |
147 | 147 | 0.763 |
148 | 148 | 0.0513 |
149 | 149 | 0.326 |
15 | 15 | 0.111 |
150 | 150 | 0.858 |
151 | 151 | 0.0713 |
152 | 152 | 0.266 |
153 | 153 | 0.315 |
154 | 154 | 0.799 |
155 | 155 | 0.71 |
156 | 156 | 5.53283e-4 |
157 | 157 | 0.293 |
158 | 158 | 0.215 |
159 | 159 | 0.0388 |
160 | 160 | 0.79 |
161 | 161 | 0.659 |
162 | 162 | 0.609 |
163 | 163 | 0.128 |
164 | 164 | 0.937 |
165 | 165 | 0.0354 |
166 | 166 | 0.846 |
167 | 167 | 0.268 |
168 | 168 | 0.215 |
169 | 169 | 0.453 |
17 | 17 | 0.0895 |
18 | 18 | 0.185 |
19 | 19 | 0.975 |
2 | 2 | 0.556 |
20 | 20 | 0.731 |
21 | 21 | 0.674 |
22 | 22 | 0.803 |
23 | 23 | 0.134 |
24 | 24 | 0.983 |
25 | 25 | 0.42 |
26 | 26 | 0.39 |
27 | 27 | 0.313 |
28 | 28 | 0.339 |
29 | 29 | 0.957 |
3 | 3 | 0.199 |
30 | 30 | 0.93 |
31 | 31 | 0.148 |
32 | 32 | 0.467 |
33 | 33 | 0.726 |
34 | 34 | 0.957 |
35 | 35 | 0.0477 |
36 | 36 | 0.204 |
37 | 37 | 0.127 |
38 | 38 | 0.663 |
39 | 39 | 0.801 |
4 | 4 | 0.637 |
40 | 40 | 0.722 |
41 | 41 | 0.139 |
42 | 42 | 0.466 |
43 | 43 | 0.183 |
44 | 44 | 0.276 |
45 | 45 | 0.496 |
46 | 46 | 0.132 |
47 | 47 | 0.47 |
48 | 48 | 0.358 |
49 | 49 | 0.104 |
5 | 5 | 0.0561 |
50 | 50 | 0.913 |
51 | 51 | 0.784 |
52 | 52 | 0.0999 |
53 | 53 | 0.912 |
54 | 54 | 0.428 |
55 | 55 | 0.236 |
56 | 56 | 0.196 |
57 | 57 | 0.561 |
58 | 58 | 0.292 |
59 | 59 | 0.174 |
6 | 6 | 0.815 |
60 | 60 | 0.0345 |
61 | 61 | 0.967 |
62 | 62 | 0.0849 |
63 | 63 | 0.179 |
64 | 64 | 0.734 |
65 | 65 | 0.218 |
66 | 66 | 0.286 |
67 | 67 | 0.8 |
68 | 68 | 1.1007e-4 |
69 | 69 | 0.461 |
7 | 7 | 0.401 |
70 | 70 | 0.0139 |
71 | 71 | 0.114 |
72 | 72 | 0.765 |
73 | 73 | 0.302 |
74 | 74 | 0.654 |
75 | 75 | 0.275 |
76 | 76 | 0.787 |
77 | 77 | 0.316 |
78 | 78 | 0.341 |
79 | 79 | 0.533 |
8 | 8 | 0.0957 |
80 | 80 | 0.118 |
81 | 81 | 0.237 |
82 | 82 | 0.504 |
83 | 83 | 0.426 |
84 | 84 | 0.302 |
85 | 85 | 0.00602 |
86 | 86 | 0.09 |
87 | 87 | 0.411 |
88 | 88 | 0.857 |
89 | 89 | 0.0434 |
9 | 9 | 0.737 |
90 | 90 | 0.179 |
91 | 91 | 0.45 |
92 | 92 | 0.117 |
93 | 93 | 0.667 |
94 | 94 | 0.24 |
95 | 95 | 0.933 |
96 | 96 | 0.235 |
97 | 97 | 0.639 |
98 | 98 | 0.118 |
99 | 99 | 0.975 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11033
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000473 (testis)
0000991 (gonad)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003135 (male reproductive organ)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0003101 (male organism)
0000079 (male reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000999 (fetal tissue sample)
0000292 (embryonic day sample - mouse)
0000004 (tissue sample)
0000299 (mouse embryonic day 16 sample)
0011364 (mouse testis- embryo E16 sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0009117 (indifferent gonad)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005564 (gonad primordium)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)