FF:692-21D1: Difference between revisions

Latest revision as of 19:19, 4 June 2020

Name:	whole body, neonate N06
Species:	Mouse (Mus musculus)
Library ID:	CNhs10515
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	whole body
dev stage	6 days neonate
sex	mixture
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005097

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10515		CAGE		DRX009153		DRR010027

Accession ID Mm9

Library id		BAM		CTSS
CNhs10515		DRZ001452		DRZ002835

Accession ID Mm10

Library id		BAM		CTSS
CNhs10515		DRZ012802		DRZ014185

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs10515

0	0
1	0.0866
10	0
100	0
1000	0.52
1001	0.0833
1002	-0.00349
1003	0.176
1004	0
1005	0.147
1006	0.422
1007	-0.0287
1008	0
1009	0.238
101	-0.0672
1010	0
1011	0.0512
1012	0
1013	-0.0387
1014	0.187
1015	-0.0837
1016	0.122
1017	0
1018	0.159
1019	0
102	0
1020	0
1021	0.0373
1022	0.562
1023	0
1024	0.316
1025	0
1026	0
1027	0.223
1028	0
1029	-0.0123
103	0.862
1030	0
1031	0.262
1032	0.17
1033	-0.0665
1034	0
1035	0.0866
1036	-0.0433
1037	0.0866
1038	0.122
1039	0.0972
104	0
1040	0.214
1041	0.275

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10515

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.186
MA0003.1	MA0003.1	0.0188
MA0004.1	MA0004.1	0.122
MA0006.1	MA0006.1	0.138
MA0007.1	MA0007.1	0.487
MA0009.1	MA0009.1	0.436
MA0014.1	MA0014.1	0.832
MA0017.1	MA0017.1	0.0851
MA0018.2	MA0018.2	0.00365
MA0019.1	MA0019.1	0.725
MA0024.1	MA0024.1	0.116
MA0025.1	MA0025.1	0.872
MA0027.1	MA0027.1	0.205
MA0028.1	MA0028.1	1.74082e-6
MA0029.1	MA0029.1	0.53
MA0030.1	MA0030.1	0.274
MA0031.1	MA0031.1	0.991
MA0035.2	MA0035.2	0.835
MA0038.1	MA0038.1	0.726
MA0039.2	MA0039.2	0.0738
MA0040.1	MA0040.1	0.0801
MA0041.1	MA0041.1	0.405
MA0042.1	MA0042.1	0.449
MA0043.1	MA0043.1	0.0153
MA0046.1	MA0046.1	0.0278
MA0047.2	MA0047.2	0.491
MA0048.1	MA0048.1	0.00188
MA0050.1	MA0050.1	0.029
MA0051.1	MA0051.1	0.092
MA0052.1	MA0052.1	3.84795e-39
MA0055.1	MA0055.1	4.9752e-5
MA0057.1	MA0057.1	0.26
MA0058.1	MA0058.1	0.0682
MA0059.1	MA0059.1	0.0159
MA0060.1	MA0060.1	0.0806
MA0061.1	MA0061.1	0.941
MA0062.2	MA0062.2	4.2411e-11
MA0065.2	MA0065.2	0.134
MA0066.1	MA0066.1	0.868
MA0067.1	MA0067.1	0.177
MA0068.1	MA0068.1	0.502
MA0069.1	MA0069.1	0.498
MA0070.1	MA0070.1	0.724
MA0071.1	MA0071.1	0.3
MA0072.1	MA0072.1	0.499
MA0073.1	MA0073.1	0.921
MA0074.1	MA0074.1	0.885
MA0076.1	MA0076.1	1.69328e-7
MA0077.1	MA0077.1	0.883
MA0078.1	MA0078.1	0.131
MA0079.2	MA0079.2	0.00434
MA0080.2	MA0080.2	0.00908
MA0081.1	MA0081.1	0.363
MA0083.1	MA0083.1	1.14204e-8
MA0084.1	MA0084.1	0.861
MA0087.1	MA0087.1	0.758
MA0088.1	MA0088.1	0.53
MA0090.1	MA0090.1	0.161
MA0091.1	MA0091.1	0.661
MA0092.1	MA0092.1	0.104
MA0093.1	MA0093.1	0.123
MA0099.2	MA0099.2	0.00904
MA0100.1	MA0100.1	0.0167
MA0101.1	MA0101.1	0.216
MA0102.2	MA0102.2	0.765
MA0103.1	MA0103.1	0.261
MA0104.2	MA0104.2	0.0329
MA0105.1	MA0105.1	0.785
MA0106.1	MA0106.1	0.535
MA0107.1	MA0107.1	0.472
MA0108.2	MA0108.2	3.32065e-73
MA0111.1	MA0111.1	0.861
MA0112.2	MA0112.2	0.0173
MA0113.1	MA0113.1	0.321
MA0114.1	MA0114.1	0.193
MA0115.1	MA0115.1	0.0135
MA0116.1	MA0116.1	0.301
MA0117.1	MA0117.1	0.716
MA0119.1	MA0119.1	0.358
MA0122.1	MA0122.1	0.183
MA0124.1	MA0124.1	0.619
MA0125.1	MA0125.1	0.00263
MA0131.1	MA0131.1	0.183
MA0135.1	MA0135.1	0.106
MA0136.1	MA0136.1	9.65978e-7
MA0137.2	MA0137.2	0.00597
MA0138.2	MA0138.2	1.25411e-4
MA0139.1	MA0139.1	0.573
MA0140.1	MA0140.1	0.0772
MA0141.1	MA0141.1	0.955
MA0142.1	MA0142.1	0.0579
MA0143.1	MA0143.1	0.176
MA0144.1	MA0144.1	0.457
MA0145.1	MA0145.1	0.0186
MA0146.1	MA0146.1	0.564
MA0147.1	MA0147.1	0.0327
MA0148.1	MA0148.1	0.966
MA0149.1	MA0149.1	0.0337
MA0150.1	MA0150.1	0.993
MA0152.1	MA0152.1	0.78
MA0153.1	MA0153.1	6.4136e-4
MA0154.1	MA0154.1	0.0481
MA0155.1	MA0155.1	0.118
MA0156.1	MA0156.1	1.96907e-7
MA0157.1	MA0157.1	0.645
MA0159.1	MA0159.1	0.66
MA0160.1	MA0160.1	0.97
MA0162.1	MA0162.1	0.364
MA0163.1	MA0163.1	0.376
MA0164.1	MA0164.1	0.0685
MA0258.1	MA0258.1	0.252
MA0259.1	MA0259.1	0.0728

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10515

Novel motif	Logo	P-value
1	1	0.951
10	10	0.293
100	100	0.726
101	101	0.0592
102	102	0.932
103	103	0.404
104	104	0.357
105	105	0.199
106	106	0.046
107	107	0.0301
108	108	0.324
109	109	0.451
11	11	0.858
110	110	0.979
111	111	0.275
112	112	0.581
113	113	0.539
114	114	0.775
115	115	0.659
116	116	0.0306
117	117	0.0932
118	118	0.479
119	119	0.558
12	12	0.206
120	120	0.567
121	121	0.925
122	122	0.612
123	123	0.141
124	124	0.748
125	125	0.85
126	126	0.43
127	127	0.276
128	128	0.211
129	129	0.784
13	13	0.81
130	130	0.811
131	131	0.175
132	132	0.858
133	133	0.333
134	134	0.725
135	135	0.368
136	136	0.468
137	137	0.397
138	138	0.813
139	139	0.955
14	14	0.223
140	140	0.947
141	141	0.295
142	142	0.462
143	143	0.878
144	144	0.0522
145	145	0.726
146	146	0.292
147	147	0.981
148	148	0.827
149	149	0.288
15	15	0.168
150	150	0.65
151	151	0.429
152	152	0.021
153	153	0.552
154	154	0.458
155	155	0.214
156	156	0.35
157	157	0.115
158	158	0.0927
159	159	0.251
160	160	0.149
161	161	0.144
162	162	0.86
163	163	0.865
164	164	0.177
165	165	0.882
166	166	0.462
167	167	0.00367
168	168	0.037
169	169	0.0243
17	17	0.302
18	18	0.5
19	19	0.105
2	2	0.0107
20	20	0.0112
21	21	0.738
22	22	0.285
23	23	0.251
24	24	0.956
25	25	0.951
26	26	0.938
27	27	0.546
28	28	0.819
29	29	0.137
3	3	0.875
30	30	0.122
31	31	0.555
32	32	0.0095
33	33	0.36
34	34	0.102
35	35	0.194
36	36	0.0789
37	37	0.373
38	38	0.908
39	39	0.293
4	4	0.871
40	40	0.656
41	41	0.519
42	42	0.928
43	43	0.628
44	44	0.747
45	45	0.145
46	46	0.678
47	47	0.774
48	48	0.969
49	49	0.684
5	5	0.699
50	50	0.34
51	51	0.55
52	52	0.101
53	53	0.173
54	54	0.299
55	55	0.57
56	56	0.378
57	57	0.797
58	58	0.701
59	59	0.00531
6	6	0.997
60	60	0.148
61	61	0.551
62	62	0.657
63	63	0.299
64	64	0.884
65	65	0.478
66	66	0.796
67	67	0.422
68	68	0.207
69	69	0.0792
7	7	0.666
70	70	0.934
71	71	0.72
72	72	0.794
73	73	0.201
74	74	0.524
75	75	0.367
76	76	0.00497
77	77	0.121
78	78	0.152
79	79	0.348
8	8	0.81
80	80	0.463
81	81	0.371
82	82	0.325
83	83	0.765
84	84	0.202
85	85	0.0907
86	86	0.661
87	87	0.084
88	88	0.608
89	89	0.167
9	9	0.17
90	90	0.0174
91	91	0.421
92	92	0.439
93	93	0.0246
94	94	0.85
95	95	0.689
96	96	0.941
97	97	0.932
98	98	0.864
99	99	0.184

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10515

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011405 mouse whole body- neonate N06 sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000004 (tissue sample)
0000303 (neonate sample - mouse)
0000312 (mouse neonate N6 sample)
0011405 (mouse whole body- neonate N06 sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
FF:0000294 (mouse embryonic day 11 sample)

@@ Line 1: / Line 1: @@
 {{f5samples
+|DRA_sample_Accession=CAGE@SAMD00005097
+|accession_numbers=CAGE;DRX009153;DRR010027;DRZ001452;DRZ002835;DRZ012802;DRZ014185
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000103,FF:0000001,FF:0000004,FF:0000303,FF:0000312,FF:0011405
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr13:83643159..83643226,+!p3@Mef2c!1.73!52.72!Mef2c;;chr11:94981424..94981439,+!p1@Dlx3!1.49!33.75!Dlx3;;chr2:120365588..120365602,-!p2@Zfp106!1.42!41.69!Zfp106;;chr7:119885539..119885574,+!p3@Tead1!1.42!25.37!Tead1;;chr1:136186574..136186592,+!p1@Myog!1.37!22.28!Myog;;chr17:14011485..14011507,+!p2@Mllt4!1.30!18.97!Mllt4;;chr4:87452200..87452229,-!p2@Mllt3!1.29!38.82!Mllt3;;chr12:37835141..37835194,+!p1@Meox2!1.28!55.59!Meox2;;chr7:6649134..6649167,-!p1@Zim1!1.27!93.53!Zim1;;chr12:74147689..74147711,-!p1@Six1!1.27!38.60!Six1;;chr15:102751603..102751630,+!p1@Hoxc13!1.27!17.65!Hoxc13;;chr15:102197405..102197454,-!p1@Sp7!1.26!17.21!Sp7;;chr3:99057677..99057730,+!p2@Tbx15!1.23!15.88!Tbx15;;chr8:87425854..87425891,+!p1@Klf1!1.22!15.44!Klf1;;chr11:121380640..121380655,-!p1@Zfp750!1.21!25.37!Zfp750;;chr13:53568104..53568156,-!p1@Msx2!1.20!21.84!Msx2;;chr17:44951553..44951586,-!p2@Runx2!1.20!16.54!Runx2;;chr7:53631837..53631850,+!p1@Myod1!1.19!14.56!Myod1;;chr12:37835120..37835133,+!p2@Meox2!1.18!20.07!Meox2;;chr12:34642510..34642530,+!p1@Twist1!1.17!43.68!Twist1;;chr5:138199361..138199441,+!p2@Tsc22d4!1.16!25.15!Tsc22d4;;chr15:103085660..103085681,-!p1@Nfe2!1.16!20.07!Nfe2;;chr3:99057269..99057306,+!p1@Tbx15!1.16!16.32!Tbx15;;chr4:87452180..87452196,-!p3@Mllt3!1.15!25.81!Mllt3;;chr2:28477452..28477483,-!p1@Gfi1b!1.15!16.32!Gfi1b;;chr10:106931775..106931798,-!p1@Myf6!1.13!12.57!Myf6;;chr19:5560600..5560617,-!p1@Ovol1!1.09!13.90!Ovol1;;chr17:44951431..44951445,-!p3@Runx2!1.09!11.25!Runx2;;chr16:25801993..25802014,+!p1@Trp63!1.05!10.15!Trp63;;chr9:31720843..31720888,-!p1@Barx2!1.03!10.81!Barx2;;chr1:169548377..169548430,+!p1@Rxrg!1.02!9.49!Rxrg;;chr6:52190467..52190500,-!p1@Hoxa10!1.02!9.49!Hoxa10;;chr6:52176164..52176195,-!p1@Hoxa9!1.01!11.47!Hoxa9;;chr6:6832076..6832092,-!p1@Dlx5!1.00!10.59!Dlx5;;chr11:101755669..101755686,-!p1@Meox1!0.99!15.88!Meox1;;chr15:103164702..103164778,-!p3@Zfp385a!0.99!10.59!Zfp385a;;chr16:43363190..43363242,+!p2@Zbtb20!0.98!26.91!Zbtb20;;chr5:77543897..77543911,-!p2@Hopx!0.98!16.76!Hopx;;chr11:96143666..96143725,+!p1@Hoxb8!0.98!9.93!Hoxb8;;chr16:25684232..25684285,+!p2@Trp63!0.98!8.60!Trp63;;chrX:7544943..7545001,-!p1@Gata1!0.98!8.60!Gata1;;chr14:118636214..118636235,-!p1@Sox21!0.97!10.15!Sox21;;chr13:83643136..83643158,+!p7@Mef2c!0.97!8.38!Mef2c;;chr12:37835248..37835260,+!p4@Meox2!0.97!8.38!Meox2;;chr11:121380594..121380609,-!p2@Zfp750!0.96!14.34!Zfp750;;chr12:37835203..37835218,+!p3@Meox2!0.96!9.71!Meox2;;chr16:91270004..91270023,+!p1@Olig1!0.96!9.26!Olig1;;chr15:75578748..75578752,-!p1@Mafa!0.95!7.94!Mafa;;chr18:80909801..80909819,-!p1@Nfatc1!0.91!44.34!Nfatc1;;chr2:74542918..74542971,+!p1@Hoxd8!0.91!11.03!Hoxd8;;chr5:135582751..135582788,+!p1@Mlxipl!0.90!28.90!Mlxipl;;chr10:12810631..12810649,+!p1@Plagl1!0.89!186.62!Plagl1;;chr7:122989594..122989626,-!p1@Sox6!0.89!6.84!Sox6;;chr11:96880072..96880079,+!p1@Sp6!0.88!6.62!Sp6;;chr8:87297280..87297326,-!p2@Nfix!0.86!15.22!Nfix;;chr13:83643232..83643254,+!p5@Mef2c!0.86!6.18!Mef2c;;chr15:76287876..76287894,+!p1@Scx!0.85!35.52!Scx;;chr2:9800207..9800234,-!p1@Gata3!0.85!19.63!Gata3;;chr11:100683839..100683890,-!p2@Stat5b!0.85!14.78!Stat5b;;chr9:96159147..96159204,+!p2@Tfdp2!0.85!11.69!Tfdp2;;chr13:72766250..72766273,+!p1@Irx2!0.85!9.71!Irx2;;chr14:67853457..67853482,+!p2@Ebf2!0.85!8.82!Ebf2;;chr14:67853425..67853454,+!p1@Ebf2!0.84!8.60!Ebf2;;chr15:102196745..102196769,-!p2@Sp7!0.84!5.96!Sp7;;chr6:115372058..115372085,+!p3@Pparg!0.84!5.96!Pparg;;chr10:106931839..106931851,-!p3@Myf6!0.83!5.74!Myf6;;chr13:72766279..72766296,+!p2@Irx2!0.82!8.60!Irx2;;chr1:165243792..165243808,-!p1@Prrx1!0.81!20.29!Prrx1;;chr13:40829137..40829205,-!p1@Tfap2a!0.81!6.18!Tfap2a;;chr9:43013917..43013968,-!p1@Pou2f3!0.81!5.51!Pou2f3;;chr4:124334894..124334899,+!p1@Pou3f1!0.80!7.06!Pou3f1;;chr4:46356509..46356527,+!p1@Foxe1!0.80!5.29!Foxe1;;chr10:106931803..106931817,-!p2@Myf6!0.80!5.29!Myf6;;chr15:97738692..97738747,-!p1@Vdr!0.79!30.44!Vdr;;chr17:25707623..25707639,-!p1@Sox8!0.79!23.60!Sox8;;chr1:165243591..165243625,-!p2@Prrx1!0.79!8.16!Prrx1;;chr11:121380611..121380625,-!p3@Zfp750!0.79!6.40!Zfp750;;chr2:168427252..168427273,-!p2@Nfatc2!0.78!6.40!Nfatc2;;chr7:53631818..53631829,+!p2@Myod1!0.78!5.07!Myod1;;chr15:103082088..103082136,-!p2@Nfe2!0.78!5.07!Nfe2;;chr4:114732112..114732158,+!p1@Tal1!0.77!11.47!Tal1;;chr2:151969288..151969294,+!p1@Tcf15!0.77!7.94!Tcf15;;chr15:85566184..85566238,+!p1@Ppara!0.77!7.50!Ppara;;chr2:103143336..103143367,-!p1@Ehf!0.76!8.16!Ehf;;chr1:57029281..57029326,-!p1@Satb2!0.76!7.72!Satb2;;chr11:98636531..98636559,-!p1@Nr1d1!0.75!28.90!Nr1d1;;chr15:78994907..78994926,-!p1@Sox10!0.75!12.79!Sox10;;chr1:165243379..165243402,-!p3@Prrx1!0.75!7.28!Prrx1;;chr4:87452167..87452178,-!p8@Mllt3!0.75!4.63!Mllt3;;chr7:122989632..122989668,-!p2@Sox6!0.75!4.63!Sox6;;chr6:30908793..30908815,-!p1@Klf14!0.75!4.63!Klf14;;chr14:67853632..67853674,+!p3@Ebf2!0.74!5.51!Ebf2;;chr6:6831950..6831985,-!p2@Dlx5!0.74!5.07!Dlx5;;chr16:43363152..43363186,+!p3@Zbtb20!0.73!10.81!Zbtb20;;chr15:102828658..102828678,+!p1@Hoxc6!0.73!4.41!Hoxc6;;chr2:172375081..172375105,+!p1@Tfap2c!0.73!4.41!Tfap2c;;chr6:6831928..6831949,-!p3@Dlx5!0.73!4.41!Dlx5;;chr10:106923133..106923146,-!p1@Myf5!0.73!4.41!Myf5;;chr16:18587076..18587106,-!p1@Tbx1!0.72!6.40!Tbx1;;chr8:90328310..90328362,-!p3@Zfp423!0.72!5.07!Zfp423;;chr17:14011529..14011544,+!p7@Mllt4!0.72!4.19!Mllt4;;chr18:7004715..7004731,-!p1@Mkx!0.71!10.81!Mkx;;chr9:51021788..51021802,+!p1@Pou2af1!0.71!5.07!Pou2af1;;chr6:115372099..115372121,+!p5@Pparg!0.70!3.97!Pparg;;chr11:44431687..44431706,+!p2@Ebf1!0.69!20.52!Ebf1;;chr5:144951153..144951203,+!p1@Bhlha15!0.69!5.96!Bhlha15;;chr6:52167513..52167549,-!p2@Hoxa7!0.69!5.74!Hoxa7;;chr14:64562503..64562524,+!p1@Sox7!0.68!25.59!Sox7;;chr12:34642682..34642753,+!p2@Twist1!0.68!11.03!Twist1;;chr12:37835219..37835230,+!p5@Meox2!0.68!3.75!Meox2;;chr11:96690779..96690790,-!p3@Nfe2l1!0.67!9.71!Nfe2l1;;chr13:99124189..99124205,+!p1@Foxd1!0.67!5.96!Foxd1;;chr11:11584970..11585030,+!p2@Ikzf1!0.67!5.51!Ikzf1;;chr10:5636374..5636421,-!p1@Esr1!0.67!4.85!Esr1;;chr15:75578637..75578669,-!p2@Mafa!0.67!4.19!Mafa;;chr4:55545337..55545357,-!p1@Klf4!0.66!60.88!Klf4;;chr6:52163319..52163342,-!p1@Hoxa3!0.66!5.51!Hoxa3;;chr13:55932591..55932622,-!p1@Pitx1!0.66!4.41!Pitx1;;chr17:14011569..14011589,+!p8@Mllt4!0.66!3.53!Mllt4;;chr8:87324243..87324277,-!p1@Nfix!0.65!98.60!Nfix;;chr4:135728581..135728668,+!p1@E2f2!0.65!19.19!E2f2;;chr10:67000609..67000625,+!p1@Egr2!0.65!8.82!Egr2;;chr15:102087737..102087801,-!p3@Rarg!0.65!6.18!Rarg;;chr9:69137716..69137744,+!p1@Rora!0.63!23.82!Rora;;chr8:87225670..87225697,+!p2@Lyl1!0.63!10.81!Lyl1;;chr9:87626083..87626108,-!p1@Tbx18!0.63!7.94!Tbx18;;chr8:94881733..94881790,+!p1@Irx5!0.63!7.06!Irx5;;chr4:135129538..135129558,-!p1@Grhl3!0.63!5.29!Grhl3;;chr9:91260594..91260612,-!p1@Zic1!0.63!3.31!Zic1;;chr15:102839948..102839975,+!p3@Hoxc6!0.63!3.31!Hoxc6;;chr1:189432881..189432903,+!p2@Esrrg!0.63!3.31!Esrrg;;chr17:27865882..27865901,-!p1@Spdef!0.63!3.31!Spdef;;chr2:152758901..152758925,-!p1@Foxs1!0.62!16.54!Foxs1;;chr19:25746898..25746910,+!p1@Dmrt2!0.62!5.07!Dmrt2;;chr6:52141694..52141715,-!p1@Hoxa4!0.62!4.19!Hoxa4;;chr4:99322820..99322845,+!p1@Foxd3!0.62!4.19!Foxd3;;chr15:103085690..103085710,-!p3@Nfe2!0.62!3.53!Nfe2;;chr11:11586218..11586285,+!p1@Ikzf1!0.61!11.25!Ikzf1;;chr12:25257141..25257173,+!p1@Grhl1!0.61!7.06!Grhl1;;chr7:19608891..19608895,-!p1@Foxa3!0.61!4.19!Foxa3;;chr5:77543935..77543947,-!p4@Hopx!0.61!3.09!Hopx;;chr12:25257265..25257294,+!p2@Grhl1!0.61!3.09!Grhl1;;chr17:14011545..14011564,+!p6@Mllt4!0.61!3.09!Mllt4;;chr1:57028538..57028553,-!p6@Satb2!0.61!3.09!Satb2;;chr2:90936901..90936945,+!p1@Sfpi1!0.60!18.53!Sfpi1;;chr7:144506077..144506128,-!p1@Ebf3!0.60!7.72!Ebf3;;chr7:123182248..123182264,-!p3@Sox6!0.60!3.75!Sox6;;chr10:80889867..80889924,-!p1@Nfic!0.59!98.60!Nfic;;chr14:19071466..19071550,-!p1@Nr1d2!0.59!23.60!Nr1d2;;chr10:126778916..126778974,-!p1@Gli1!0.59!7.28!Gli1;;chr8:87297878..87297935,-!p3@Nfix!0.59!7.28!Nfix;;chr7:51787434..51787448,-!p1@Spib!0.59!4.41!Spib;;chr9:96159133..96159145,+!p9@Tfdp2!0.59!2.87!Tfdp2;;chr13:40826961..40827001,-!p4@Tfap2a!0.59!2.87!Tfap2a;;chr3:99044284..99044308,+!p4@Tbx15!0.59!2.87!Tbx15;;chr2:74543202..74543213,+!p3@Hoxd8!0.59!2.87!Hoxd8;;chr6:52195763..52195792,-!p2@Hoxa11!0.59!2.87!Hoxa11;;chr16:91225808..91225824,+!p1@Olig2!0.59!2.87!Olig2;;chr19:5560570..5560582,-!p2@Ovol1!0.59!2.87!Ovol1;;chr1:57028125..57028149,-!p2@Satb2!0.59!2.87!Satb2;;chr2:147190725..147190747,+!p2@Pax1!0.59!2.87!Pax1;;chr11:96145450..96145517,+!p2@Hoxb7!0.58!4.63!Hoxb7;;chr1:92895299..92895373,+!p2@Lrrfip1!0.57!69.71!Lrrfip1;;chr7:35904304..35904320,+!p1@Cebpa!0.57!68.38!Cebpa;;chr11:96690797..96690813,-!p1@Nfe2l1!0.57!65.07!Nfe2l1;;chr1:38721792..38721845,-!p1@Aff3!0.57!3.53!Aff3;;chr2:160192793..160192809,-!p1@Mafb!0.56!50.07!Mafb;;chr3:5218629..5218684,+!p1@Zfhx4!0.56!10.15!Zfhx4;;chr4:148178559..148178603,+!p1@Casz1!0.56!9.04!Casz1;;chr11:78200071..78200100,-!p1@Foxn1!0.56!2.65!Foxn1;;chr11:76485958..76485963,+!p1@Bhlha9!0.56!2.65!Bhlha9;;chr14:67853682..67853702,+!p4@Ebf2!0.56!2.65!Ebf2;;chr9:91260616..91260653,-!p2@Zic1!0.56!2.65!Zic1;;chr15:85566537..85566552,+!p2@Ppara!0.56!2.65!Ppara;;chr15:85566241..85566253,+!p6@Ppara!0.56!2.65!Ppara;;chr9:71743854..71743909,-!p1@Tcf12!0.55!25.15!Tcf12;;chr2:91864300..91864379,-!p2@Creb3l1!0.55!8.82!Creb3l1;;chr2:91864449..91864492,-!p3@Creb3l1!0.55!4.63!Creb3l1;;chr6:52114821..52114828,-!p1@Hoxa2!0.55!4.19!Hoxa2;;chr8:124984566..124984595,-!p1@Snai3!0.54!4.19!Snai3;;chr15:103085802..103085817,-!p4@Nfe2!0.54!3.31!Nfe2;;chr10:80893711..80893784,-!p3@Nfic!0.53!15.66!Nfic;;chr15:102797225..102797243,+!p2@Hoxc10!0.53!2.43!Hoxc10;;chr15:102839976..102839989,+!p4@Hoxc6!0.53!2.43!Hoxc6;;chr14:70477113..70477173,+!p1@Egr3!0.53!2.43!Egr3;;chr3:99057256..99057268,+!p3@Tbx15!0.53!2.43!Tbx15;;chr2:103251839..103251853,+!p5@Elf5!0.53!2.43!Elf5;;chr3:95032091..95032183,-!p1@Mllt11!0.52!25.15!Mllt1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Tead4;;chr8:123640063..123640077,+!p1@Foxc2!0.43!3.75!Foxc2;;chr8:87324203..87324206,-!p10@Nfix!0.43!2.65!Nfix;;chr12:25257114..25257131,+!p4@Grhl1!0.43!2.43!Grhl1;;chr13:31898767..31898785,+!p4@Foxc1!0.43!2.21!Foxc1;;chr1:14746065..14746079,-!p1@Msc!0.43!2.21!Msc;;chr6:131338435..131338482,-!p1@Csda!0.42!229.64!Csda;;chr18:14131126..14131211,-!p1@Zfp521!0.42!50.52!Zfp521;;chr15:38230448..38230470,-!p1@Klf10!0.42!49.41!Klf10;;chr15:101097270..101097290,+!p1@Nr4a1!0.42!23.82!Nr4a1;;chr17:47873985..47874056,+!p1@Tfeb!0.42!18.97!Tfeb;;chr16:14705961..14705978,+!p2@Snai2!0.42!10.59!Snai2;;chr2:133377954..133377973,+!p1@Bmp2!0.42!7.06!Bmp2;;chr17:56970339..56970428,-!p1@Rfx2!0.42!6.84!Rfx2;;chr8:59799772..59799789,+!p1@Hand2!0.42!6.18!Hand2;;chr4:154010409..154010466,-!p2@Prdm16!0.42!4.85!Prdm16;;chr15:102087880..102087927,-!p2@Rarg!0.42!4.85!Rarg;;chr18:69681483..69681514,+!p11@Tcf4!0.42!3.31!Tcf4;;chr3:5218516..5218544,+!p2@Zfhx4!0.42!2.87!Zfhx4;;chr1:165243653..165243664,-!p4@Prrx1!0.42!2.65!Prrx1;;chr15:102865088..102865107,+!p1@Hoxc4!0.42!2.43!Hoxc4;;chr10:13685899..13685916,+!p1@Hivep2!0.41!24.04!Hivep2;;chr12:86940338..86940357,+!p1@Jdp2!0.41!22.50!Jdp2;;chr11:98636575..98636607,-!p2@Nr1d1!0.41!7.94!Nr1d1;;chr15:50720601..50720630,-!p2@Trps1!0.41!4.85!Trps1;;chr8:87225702..87225726,+!p3@Lyl1!0.41!3.97!Lyl1;;chr2:90936978..90937023,+!p3@Sfpi1!0.41!3.75!Sfpi1;;chr16:43363968..43364001,+!p7@Zbtb20!0.41!3.53!Zbtb20;;chr6:115311270..115311298,+!p1@Pparg!0.41!2.65!Pparg;;chr1:194979361..194979373,+!p2@Irf6!0.41!2.43!Irf6;;chr7:31206743..31206761,+!p1@Nfkbid!0.41!2.43!Nfkbid;;chr8:79423672..79423727,+!p2@Nr3c2!0.41!2.21!Nr3c2;;chr7:52960730..52960762,+!p3@Dbp!0.41!2.21!Dbp;;chr4:55545051..55545110,-!p2@Klf4!0.41!2.21!Klf4;;chr3:128917187..128917223,+!p2@Pitx2!0.41!1.99!Pitx2;;chr4:44723559..44723593,-!p1@Pax5!0.41!1.54!Pax5;;chr2:74536026..74536039,+!p1@Hoxd9!0.41!1.54!Hoxd9;;chr4:139388835..139388867,-!p1@Pax7!0.41!1.54!Pax7;;chr2:74520343..74520383,+!p4@Hoxd11!0.41!1.54!Hoxd11;;chr2:74517742..74517758,+!p2@Hoxd11!0.41!1.54!Hoxd11;;chr3:66785201..66785226,-!p3@Shox2!0.41!1.54!Shox2;;chr4:114729957..114730012,+!p3@Tal1!0.41!1.54!Tal1;;chr6:52167434..52167450,-!p3@Hoxa7!0.41!1.54!Hoxa7;;chr6:6831986..6832007,-!p4@Dlx5!0.41!1.54!Dlx5;;chr12:25257298..25257323,+!p5@Grhl1!0.41!1.54!Grhl1;;chr15:102767247..102767265,+!p1@Hoxc12!0.41!1.54!Hoxc12;;chr13:53568191..53568219,-!p2@Msx2!0.41!1.54!Msx2;;chr13:53568081..53568094,-!p3@Msx2!0.41!1.54!Msx2;;chr16:43364036..43364047,+!p28@Zbtb20!0.41!1.54!Zbtb20;;chr10:66998241..66998263,+!p2@Egr2!0.41!1.54!Egr2;;chr10:5734677..5734702,-!p4@Esr1!0.41!1.54!Esr1;;chr2:103264213..103264233,+!p1@Elf5!0.41!1.54!Elf5;;chr1:19199236..19199258,+!p1@Tfap2b!0.41!1.54!Tfap2b;;chr1:169528720..169528749,+!p6@Rxrg!0.41!1.54!Rxrg;;chr13:83663902..83663927,+!p1@Mef2c!0.40!54.93!Mef2c;;chr1:193007123..193007139,-!p1@Atf3!0.40!12.13!Atf3;;chr18:69681439..69681456,+!p7@Tcf4!0.40!5.07!Tcf4;;chr4:134708451..134708469,+!p1@Runx3!0.40!3.31!Runx3;;chr7:19895354..19895369,-!p1@Fosb!0.40!2.43!Fosb;;chr10:88145766..88145770,-!p1@Spic!0.40!2.21!Spic;;chr6:52167459..52167492,-!p1@Hoxa7!0.40!1.99!Hoxa7;;chr5:138188180..138188203,+!p12@Tsc22d4!0.40!1.99!Tsc22d4;;chr9:96159225..96159249,+!p5@Tfdp2!0.40!1.76!Tfdp2;;chr13:83663868..83663894,+!p2@Mef2c!0.39!31.77!Mef2c;;chr10:67599319..67599360,-!p2@Arid5b!0.39!23.82!Arid5b;;chr15:81633165..81633188,+!p2@Tef!0.39!17.65!Tef;;chr15:38230415..38230426,-!p2@Klf10!0.39!7.06!Klf10;;chr1:120950098..120950132,-!p2@Gli2!0.39!4.41!Gli2;;chr2:30700788..30700824,+!p2@Prrx2!0.39!2.65!Prrx2;;chr11:44431016..44431045,+!p5@Ebf1!0.39!2.43!Ebf1;;chr2:38206580..38206600,+!p2@Lhx2!0.39!1.99!Lhx2;;chr15:81641878..81641921,+!p1@Tef!0.38!55.81!Tef;;chr13:15555496..15555544,+!p1@Gli3!0.38!6.84!Gli3;;chr8:94325321..94325366,-!p1@Irx3!0.38!4.63!Irx3;;chr2:91035197..91035237,-!p1@Nr1h3!0.38!3.75!Nr1h3;;chrX:137135036..137135064,-!p4@Tsc22d3!0.38!3.53!Tsc22d3;;chr5:65203599..65203617,+!p8@Klf3!0.38!2.87!Klf3;;chr1:42752574..42752621,+!p@chr1:42752574..42752621,+!0.38!1.99!Pou3f3;;chr11:11585912..11585950,+!p6@Ikzf1!0.38!1.99!Ikzf1;;chr11:98636373..98636387,-!p5@Nr1d1!0.38!1.76!Nr1d1;;chr15:81633116..81633125,+!p6@Tef!0.38!1.76!Tef;;chr16:42907676..42907797,+!p1@Zbtb20!0.37!27.35!Zbtb20;;chr1:36364590..36364608,+!p1@Arid5a!0.37!21.18!Arid5a;;chr7:52960555..52960662,+!p1@Dbp!0.37!17.43!Dbp;;chr6:86619104..86619119,-!p1@Mxd1!0.37!16.76!Mxd1;;chr3:94176733..94176794,+!p1@Rorc!0.37!16.10!Rorc;;chr17:51952617..51952680,-!p3@Satb1!0.37!10.15!Satb1;;chr3:130813200..130813252,+!p1@Lef1!0.37!8.82!Lef1;;chr18:75979866..75979890,+!p3@Zbtb7c!0.37!3.75!Zbtb7c;;chr2:65683890..65683907,+!p1@Csrnp3!0.37!3.31!Csrnp3;;chr1:186556375..186556404,-!p3@Hlx!0.37!3.09!Hlx;;chr5:20387832..20387841,-!p2@Phtf2!0.37!2.87!Phtf2;;chr10:22451765..22451795,-!p6@Tbpl1!0.37!2.43!Tbpl1;;chr10:44178493..44178520,-!p3@Prdm1!0.37!2.21!Prdm1;;chr7:52963269..52963305,+!p4@Dbp!0.37!2.21!Dbp;;chr11:44431369..44431389,+!p8@Ebf1!0.37!1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+|ffid_belonging_in_development=FF:0000294
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 36: / Line 42: @@
 |has_quality=
 |id=FF:692-21D1
-|is_a=EFO:0002091;;FF:0000004;;FF:0000103;;FF:0011405
+|is_a=EFO:0002091;;FF:0011405
+|is_obsolete=
+|library_id=CNhs10515
+|library_id_phase_based=2:CNhs10515
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;692
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;692
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/whole%2520body%252c%2520neonate%2520N06.CNhs10515.692-21D1.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/whole%2520body%252c%2520neonate%2520N06.CNhs10515.692-21D1.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/whole%2520body%252c%2520neonate%2520N06.CNhs10515.692-21D1.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/whole%2520body%252c%2520neonate%2520N06.CNhs10515.692-21D1.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/whole%2520body%252c%2520neonate%2520N06.CNhs10515.692-21D1.mm9.nobarcode.rdna.fa.gz
 |name=whole body, neonate N06
 |namespace=FANTOM5
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs10515,LSID649,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|repeat_enrich_byfamily=0.0436196098232053,0,0,0,0,0,0.279328463713429,0,0,0,0,0.238491171930628,0,0,0,0,0,0,-0.105323038385172,0,0,0,0,0,0.0865703124974023,0,0,0,0,0,0,0,0.0759407288540178,0,0,0,0,0.0349605041749893,0.0531126878299922,0.0378237307134288,0.0452081313577968,0.663723995270303,0.171784299584428,0,0,0,0,0,0,0.220572027003917,0,0,0,0.0865703124974023,0,-0.0660055475634404,0.0865703124974023,0,0,0,0.0437233574145275,0,0.0307186407127981,0,0.0865703124974023,0,-0.074104646659625,-0.0900786303354695,-0.0715207302736802,0.116978460753806,0.0865703124974023,0,0.05151534570324,0.0870559881526402,0,0,0.0423761109809298,-0.00213998971955785,-0.00846339736770862,-0.0788315948399074,0,0,0,0,0,0,-0.0372872873071537,-0.127497054073837,0.0018982174341441,0,0,0,0,0
 |rna_box=21
 |rna_catalog_number=
@@ Line 57: / Line 76: @@
 |rna_weight_ug=
 |sample_age=
+|sample_category=developmental
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 76: / Line 96: @@
 |sample_tissue=whole body
 |top_motifs=TBP:3.61580461955;HOX{A4,D4}:2.56527698743;SMAD1..7,9:2.51043625328;FOXL1:2.37666021884;ALX1:2.35807434858;ESR1:2.29781351319;MEF2{A,B,C,D}:2.27814580608;TFCP2:2.27396124057;TFAP4:2.23526176882;GLI1..3:2.08749725989;GCM1,2:2.04568872473;ZNF148:1.97034539092;MYOD1:1.90043073937;FOSL2:1.88269826869;TFAP2{A,C}:1.84912224615;ZNF238:1.78143010192;PAX1,9:1.71473425355;NFE2L2:1.691751673;EBF1:1.55250942437;FOXP3:1.50153870557;NFATC1..3:1.44670847242;MYFfamily:1.44028181279;TAL1_TCF{3,4,12}:1.40161132358;FOX{I1,J2}:1.39886773112;LEF1_TCF7_TCF7L1,2:1.33450696238;TEAD1:1.27610322224;FOS_FOS{B,L1}_JUN{B,D}:1.27414279606;TLX2:1.27074726117;NKX2-3_NKX2-5:1.17255486488;SOX5:1.14017589898;ATF6:1.13894691507;TLX1..3_NFIC{dimer}:1.12285225247;TOPORS:1.10921338842;XCPE1{core}:1.10729380464;MAFB:1.09121873801;PAX5:1.08392103529;SRF:1.07430811796;RXRA_VDR{dimer}:1.04672067235;TGIF1:1.04503390897;ZNF423:1.02653879844;GTF2A1,2:0.994385344886;MAZ:0.981977124436;VSX1,2:0.968598576242;IKZF1:0.957817388718;MTF1:0.956323540724;NANOG:0.950495047453;TP53:0.932742876775;STAT2,4,6:0.923083630548;SP1:0.919232079337;NHLH1,2:0.916149302991;SOX{8,9,10}:0.888195948508;EN1,2:0.86002782377;EP300:0.856784967501;HES1:0.848739318754;CEBPA,B_DDIT3:0.826103348416;GTF2I:0.804701346143;MYBL2:0.788982153925;PATZ1:0.769097179357;FOXA2:0.763323697059;HMX1:0.744489703447;BACH2:0.731290525331;HSF1,2:0.714613927982;GFI1B:0.675025034873;HLF:0.653690009554;KLF4:0.623352087305;NR5A1,2:0.612951553773;PPARG:0.611490058718;HIC1:0.590992893397;NFE2L1:0.573792341751;GFI1:0.556598688547;TBX4,5:0.554181184386;LMO2:0.552568318889;RXR{A,B,G}:0.481398231355;RREB1:0.477872518267;TFAP2B:0.470326610669;ESRRA:0.466800757998;NKX2-1,4:0.435643925329;NR3C1:0.427056741687;T:0.414399700214;GATA6:0.395715772772;CRX:0.378605416167;PAX2:0.375177351891;NFE2:0.369873907228;ZIC1..3:0.368380972611;PRDM1:0.333875223893;SPZ1:0.330395401771;RORA:0.330311013683;NKX3-2:0.30043788695;RUNX1..3:0.285006108358;ZBTB6:0.27491407879;MTE{core}:0.266657006608;REST:0.262668198745;HIF1A:0.252694532018;HMGA1,2:0.252333583838;SREBF1,2:0.23669556674;GATA4:0.183432397482;MZF1:0.176700483548;SPI1:0.166151320184;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.162611619942;GZF1:0.158727117553;FOX{F1,F2,J1}:0.152892320742;SNAI1..3:0.130863473289;SPIB:0.107536107508;NR1H4:0.106318151918;STAT5{A,B}:0.10382434826;DMAP1_NCOR{1,2}_SMARC:0.0930439203393;IRF7:0.0924498935544;ALX4:0.0636833581989;PDX1:0.0625871875495;EGR1..3:0.0567594034772;UFEwm:0.052625645516;ETS1,2:0.0494824480689;ATF2:0.0470362848986;IKZF2:0.0351162933459;POU3F1..4:0.0187596334328;HOXA9_MEIS1:0.0123830502205;NKX2-2,8:0.0109314651948;FOX{D1,D2}:-0.0453895329073;NFIL3:-0.0555420767264;NFKB1_REL_RELA:-0.115280268584;POU2F1..3:-0.15987066058;SOX2:-0.163903261414;MED-1{core}:-0.186939034467;YY1:-0.188368129428;POU5F1:-0.189752344197;HOX{A5,B5}:-0.192342986033;FOXQ1:-0.204018592509;PRRX1,2:-0.206104571411;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.21614412786;E2F1..5:-0.217407013529;ZFP161:-0.22113980061;HNF1A:-0.226477543642;FOXO1,3,4:-0.234734318039;CUX2:-0.269273986785;HNF4A_NR2F1,2:-0.27535791591;JUN:-0.279540135945;ZEB1:-0.30018227749;NANOG{mouse}:-0.302769074931;IRF1,2:-0.317599189792;HAND1,2:-0.322019767274;BREu{core}:-0.326726995675;SOX17:-0.329939157907;EVI1:-0.351675971179;ATF4:-0.406139785367;DBP:-0.429115099094;LHX3,4:-0.430114132624;FOXN1:-0.437695938817;TFDP1:-0.451824220219;NR6A1:-0.455547152616;POU6F1:-0.463859384762;FOXM1:-0.467093613767;ZNF143:-0.469951848796;NKX3-1:-0.485301241081;MYB:-0.532378007106;TEF:-0.536784681494;NFIX:-0.547955864037;RFX1:-0.568958261668;ZNF384:-0.587797242908;bHLH_family:-0.594375410944;PAX6:-0.601134817031;ELF1,2,4:-0.607407536778;RBPJ:-0.681561602125;RFX2..5_RFXANK_RFXAP:-0.701783443504;AR:-0.732091263483;CDC5L:-0.776548359213;NFY{A,B,C}:-0.850165909163;ATF5_CREB3:-0.850934526498;AHR_ARNT_ARNT2:-0.873281179786;PBX1:-0.885913781914;HBP1_HMGB_SSRP1_UBTF:-0.887009910426;PITX1..3:-0.909852357574;PAX4:-0.911198190091;FOXP1:-0.991114423879;NRF1:-0.991961786386;OCT4_SOX2{dimer}:-1.00163416311;PAX8:-1.028836624;BPTF:-1.15176776487;NKX6-1,2:-1.1585524407;STAT1,3:-1.19364342198;ADNP_IRX_SIX_ZHX:-1.21235327903;CREB1:-1.2135722232;POU1F1:-1.28116879681;AIRE:-1.32647117626;ARID5B:-1.38000094947;FOXD3:-1.44673878613;ELK1,4_GABP{A,B1}:-1.47138434406;ONECUT1,2:-1.65775264557;CDX1,2,4:-1.73968725906;ZBTB16:-1.91133068796
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:692-21D1;search_select_hide=table117:692-21D1
 }}

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FF:692-21D1: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 19:19, 4 June 2020

CNhs10515

	FAQ
	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0