FFCP PHASE1:Mm9::chr1:121970313..121970380,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170706 | |EntrezGene=170706 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=144 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JJV3 | |UniProt=Q9JJV3 | ||
|association_with_transcript=0bp_to_NM_019432,uc007cjd.1_5end | |association_with_transcript=0bp_to_NM_019432,uc007cjd.1_5end | ||
|cluster_id=chr1:121970313..121970380,- | |||
|description=CAGE_peak_1_at_Tmem37_5end | |description=CAGE_peak_1_at_Tmem37_5end | ||
|id=chr1:121970313..121970380,- | |id=chr1:121970313..121970380,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.05e-11!66;UBERON:0005172!2.85e-11!49;UBERON:0005173!2.85e-11!49;UBERON:0002417!2.85e-11!49;UBERON:0000916!2.85e-11!49;UBERON:0009854!5.59e-11!23;UBERON:0009856!5.59e-11!23;UBERON:0002107!6.14e-11!22;UBERON:0007499!6.14e-11!22;UBERON:0006925!6.14e-11!22;UBERON:0009497!6.14e-11!22;UBERON:0000015!6.14e-11!22;UBERON:0002423!6.14e-11!22;UBERON:0006235!6.14e-11!22;UBERON:0008835!6.14e-11!22;UBERON:0003894!6.14e-11!22;UBERON:0004161!6.14e-11!22;UBERON:0008836!6.14e-11!22;UBERON:0002365!1.94e-09!25;UBERON:0002330!1.94e-09!25;UBERON:0005177!1.76e-08!85;UBERON:0000160!4.59e-08!43;UBERON:0004119!8.74e-08!130;UBERON:0000925!8.74e-08!130;UBERON:0006595!8.74e-08!130;UBERON:0001007!4.86e-07!128;UBERON:0001555!4.86e-07!128;UBERON:0007026!4.86e-07!128;UBERON:0002100!6.18e-07!98 | |ontology_enrichment_uberon=UBERON:0009569!1.05e-11!66;UBERON:0005172!2.85e-11!49;UBERON:0005173!2.85e-11!49;UBERON:0002417!2.85e-11!49;UBERON:0000916!2.85e-11!49;UBERON:0009854!5.59e-11!23;UBERON:0009856!5.59e-11!23;UBERON:0002107!6.14e-11!22;UBERON:0007499!6.14e-11!22;UBERON:0006925!6.14e-11!22;UBERON:0009497!6.14e-11!22;UBERON:0000015!6.14e-11!22;UBERON:0002423!6.14e-11!22;UBERON:0006235!6.14e-11!22;UBERON:0008835!6.14e-11!22;UBERON:0003894!6.14e-11!22;UBERON:0004161!6.14e-11!22;UBERON:0008836!6.14e-11!22;UBERON:0002365!1.94e-09!25;UBERON:0002330!1.94e-09!25;UBERON:0005177!1.76e-08!85;UBERON:0000160!4.59e-08!43;UBERON:0004119!8.74e-08!130;UBERON:0000925!8.74e-08!130;UBERON:0006595!8.74e-08!130;UBERON:0001007!4.86e-07!128;UBERON:0001555!4.86e-07!128;UBERON:0007026!4.86e-07!128;UBERON:0002100!6.18e-07!98 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.03e-11,66;UBERON:0005172,2.78e-11,49;UBERON:0005173,2.78e-11,49;UBERON:0002417,2.78e-11,49;UBERON:0000916,2.78e-11,49;UBERON:0009854,5.47e-11,23;UBERON:0009856,5.47e-11,23;UBERON:0002107,6.01e-11,22;UBERON:0007499,6.01e-11,22;UBERON:0006925,6.01e-11,22;UBERON:0009497,6.01e-11,22;UBERON:0000015,6.01e-11,22;UBERON:0002423,6.01e-11,22;UBERON:0006235,6.01e-11,22;UBERON:0008835,6.01e-11,22;UBERON:0003894,6.01e-11,22;UBERON:0004161,6.01e-11,22;UBERON:0008836,6.01e-11,22;UBERON:0000160,2.54e-10,31;UBERON:0005177,3.66e-10,79;UBERON:0002365,1.90e-09,25;UBERON:0002330,1.90e-09,25;UBERON:0002100,2.25e-08,90;UBERON:0004119,2.69e-08,118;UBERON:0000925,2.69e-08,118;UBERON:0006595,2.69e-08,118;UBERON:0003104,4.62e-08,61;UBERON:0009142,4.62e-08,61;UBERON:0001007,1.63e-07,116;UBERON:0001555,1.63e-07,116;UBERON:0007026,1.63e-07,116;UBERON:0005409,3.41e-07,47;UBERON:0004921,6.46e-07,114 | |||
|phase1_expression=19.8584570409945,100.853892807775,123.304793874564,174.521849924041,187.83589872988,24.8461322429597,41.5830500260036,0.129123323441576,0,0,0,0,0,0.0874204024189974,4.33042690360362,2.83465374345756,11.1929900500503,1.57731082679119,2.05671650408608,2.54633791078818,26.788636397587,0.297872853602656,0,101.275203628226,115.163459095719,160.210717988091,174.889370440584,106.227317714143,63.2777986789725,45.8694836163074,132.816575882528,0.635030673459631,0,0,11.554064790051,16.1247605997738,5.51257261908397,0.837063261473815,0,1.0470474879476,0,0,0,3.65100772129174,2.83855407414641,2.56965453026354,113.446744930466,84.1577103628524,65.9058548203415,78.9385390241591,22.5378138816834,48.8758718840903,0,0,1.00828139742739,296.877389185483,122.636312293788,175.844183466608,1.01158230429799,1.05798195854407,1.26766280701236,31.8513860144984,16.0073063300005,221.375330451224,285.782378781856,274.245324369195,51.5312190091656,47.6430698598728,1.34796496001021,2.02508907497536,1.05162480675691,3.14216082844184,6.40518768759679,0.734944795289724,1.24599112323707,2.75765635983006,1.10115880999389,0.766124028511126,1.0752457327937,0.791317726381163,1.64677758484337,0,2.23346399201105,2.8138130501584,2.13917546887534,4.41942878210502,2.98980529678116,1.67759501242771,4.08921443999194,3.47629176491213,16.232411367294,196.176643951756,141.434037411212,191.594633031425,317.090891714463,136.20017367759,59.407989715731,5.28333999991979,7.79358013808606,5.3000936176551,2.81686839553361,1.28326477414318,2.54805239706646,0,10.3915699685383,9.62767488805375,11.62706223534,101.852020709401,2.58937883647172,18.1099409659086,10.4091196059682,19.7902560902892,22.3697032338377,17.6345489446568,11.7588707135705,10.9329934456818,960.352449648042,38.3188295837766,7.07688441559899,8.8971767471075,3.09178125844551,2.42437626567611,22.3670113461747,1.17112318804619,1.25668024088073,77.9144018386204,0.11981512450592,0,0.254140454146129,2.84602214869163,1.83000241127451,0.376963056338593,1.73824320192276,0.255715457330331,0.83115217823824,0.973447578406546,12.4244023897386,13.5603597965001,44.2264827258931,4.20883711772948,4.42409506073193,7.81667155073808,6.84236093260327,7.83665052745718,4.89862793889561,5.89323113310309,5.34099829990454,5.17406741478031,1.07783996466421,2.83659120251729,1.58356011747554,2.84954452155847,1.66828349535359,1.39300866608867,3.08673204611915,6.76716507182877,0,0.51469581422943,0,9.52778553663309,7.73935997937617,7.20248245844059,4.02466050494857,5.70616272067471,4.31947916084659,4.41814495025775,3.48755421819505,1.16765342367169,1.97471819896177,3.2833492815819,2.83740833410495,2.77779976108131,4.83010253640311,5.36825675041487,2.94405927989778,2.6755199218614,373.373224771692,136.456492398389,2.77274725695804,2.09013004674395,9.27845721519072,47.7989953357322,84.2812786172059,194.03013863481,147.104009078799,441.063800750901,369.211421727596,358.718519090195,319.741102875357,130.328814254862,130.76352017419,153.936204225626,19.3461258972143,16.2232887905815,22.5415471346161,42.766778847516,61.0950334578021,75.4661422019828,95.6768806690013,85.31866553221,116.964052241824,115.993334086492,234.494028025935,18.3529616287703,32.0391162034521,31.4806957338795,55.1779530176728,84.4120059133459,149.210749143912,114.503062705423,163.432308589236,234.475446862622,100.637744569148,185.326191938915,235.588443201493,141.69675052833,147.464673915012,201.661391929887,42.6779869284857,5.11626811780309,2.60743962307241,3.73439188705414,3.75504397261603,12.8979818230198,31.6598042378398,35.904591205835,18.128041572212,17.9386398615508,18.8156627015835,37.524699069904,31.0832967358612,46.8662949804097,45.2373851817817,29.3709069262103,1.96705709207614,5.24279817978992,2.0871576698413,1.40654023910644,4.42624352517024,11.6136626514012,6.31016438832513,9.76096860741596,1.93881057959519,3.58453196928828,4.90157082981267,2.26461224631066,9.71545684019746,12.5670018901864,6.7198922250909,2.24924921495265,7.52282451603824,8.01295216502649,3.74640006513225,6.92874516484649,11.9470624505967,8.25454162926937,10.2790009368015,4.52652191414155,5.90603785761546,6.7635732547664,90.1914743157092,13.4507479906677,11.4079161083111,2.52829406348653,2.10837217149998,4.12542172992747,8.5109901438447,8.46287141947158,13.0652270620582,13.0745591369271,9.04435191575595,13.3776613201553,10.6956863391379,24.6616608782825,165.912897601043,847.751947597008,1.98475558249466,3.2977250588296,8.23468576149118,1.86970067277283,2.38744688006273,0.820704498725306,240.763171056257,1.48340241608408,8.54354403989263,7.63631411463923,9.81530995059472,5.65105371014073,2.7338845544205,5.49067615695654,1.18984900995699,1.6794174278839,0.552799895217695,3.81868247206045,1.58167996790568,5.28630614529807,10.9085394230019,5.64538399239065,18.7791804821713,12.1377911746339,20.0847897412566,2.87931536182433,17.498021394392,14.9121435140862,1.69107881605257,3.13984746692355,2.81279433777066,1.55560950675238,3.61647505737647,2.87225413334323,4.3422178298929,6.51021924219751,2.20204623293993,3.62376181239009,7.20075015644664,5.68820017130721,8.91990947276722,6.47079030138412,3.37794139742267,2.68540043501222,3.3775830312815,2.40390899039938,2.36303243479324,1.31256384932592,1.295515713135,1.81487133246313,2.14407337627455,1.82802499116626,2.33753804363138,9.06921534460846,55.9404602502643,29.426144967908,129.439039216704,3.09103350451505,10.5102186252662,6.22715522508701,3.21552568618599,2.50786052017682,0,0,1.14579102687879,2.06223818812425,3.42541259885321,0.755393897389701,0.675022500231806,3.15224842256954,1.35942722695261,2.07104124700728,0.415149390336707,8.77854721482268,9.21961471072325,14.1001895899611,10.8998844566551,13.420576116851,29.3365680698132,31.5233637575508,33.3755977975488,28.5547849293091,35.4871019846336,25.8418087698924,23.4103768674706,21.5764763604409,20.8490752308876,27.1487404031352,21.670368951688,20.4483773691527,28.0218412546248,26.0542088637883,34.2869252385415,25.3790402807853,22.8898742349428,29.7960154096273,23.9978920059093,25.384382367503,30.0001875511347,22.0978557607788,21.1854417599544,28.0571135828869,25.6251639148216,21.9664995697507,24.5538625901814,21.6911577660352,20.6410073749821,10.2422336954558,34.6218780499204,45.5526634582392,21.4242931917105,13.2354851471709,23.650519233283 | |phase1_expression=19.8584570409945,100.853892807775,123.304793874564,174.521849924041,187.83589872988,24.8461322429597,41.5830500260036,0.129123323441576,0,0,0,0,0,0.0874204024189974,4.33042690360362,2.83465374345756,11.1929900500503,1.57731082679119,2.05671650408608,2.54633791078818,26.788636397587,0.297872853602656,0,101.275203628226,115.163459095719,160.210717988091,174.889370440584,106.227317714143,63.2777986789725,45.8694836163074,132.816575882528,0.635030673459631,0,0,11.554064790051,16.1247605997738,5.51257261908397,0.837063261473815,0,1.0470474879476,0,0,0,3.65100772129174,2.83855407414641,2.56965453026354,113.446744930466,84.1577103628524,65.9058548203415,78.9385390241591,22.5378138816834,48.8758718840903,0,0,1.00828139742739,296.877389185483,122.636312293788,175.844183466608,1.01158230429799,1.05798195854407,1.26766280701236,31.8513860144984,16.0073063300005,221.375330451224,285.782378781856,274.245324369195,51.5312190091656,47.6430698598728,1.34796496001021,2.02508907497536,1.05162480675691,3.14216082844184,6.40518768759679,0.734944795289724,1.24599112323707,2.75765635983006,1.10115880999389,0.766124028511126,1.0752457327937,0.791317726381163,1.64677758484337,0,2.23346399201105,2.8138130501584,2.13917546887534,4.41942878210502,2.98980529678116,1.67759501242771,4.08921443999194,3.47629176491213,16.232411367294,196.176643951756,141.434037411212,191.594633031425,317.090891714463,136.20017367759,59.407989715731,5.28333999991979,7.79358013808606,5.3000936176551,2.81686839553361,1.28326477414318,2.54805239706646,0,10.3915699685383,9.62767488805375,11.62706223534,101.852020709401,2.58937883647172,18.1099409659086,10.4091196059682,19.7902560902892,22.3697032338377,17.6345489446568,11.7588707135705,10.9329934456818,960.352449648042,38.3188295837766,7.07688441559899,8.8971767471075,3.09178125844551,2.42437626567611,22.3670113461747,1.17112318804619,1.25668024088073,77.9144018386204,0.11981512450592,0,0.254140454146129,2.84602214869163,1.83000241127451,0.376963056338593,1.73824320192276,0.255715457330331,0.83115217823824,0.973447578406546,12.4244023897386,13.5603597965001,44.2264827258931,4.20883711772948,4.42409506073193,7.81667155073808,6.84236093260327,7.83665052745718,4.89862793889561,5.89323113310309,5.34099829990454,5.17406741478031,1.07783996466421,2.83659120251729,1.58356011747554,2.84954452155847,1.66828349535359,1.39300866608867,3.08673204611915,6.76716507182877,0,0.51469581422943,0,9.52778553663309,7.73935997937617,7.20248245844059,4.02466050494857,5.70616272067471,4.31947916084659,4.41814495025775,3.48755421819505,1.16765342367169,1.97471819896177,3.2833492815819,2.83740833410495,2.77779976108131,4.83010253640311,5.36825675041487,2.94405927989778,2.6755199218614,373.373224771692,136.456492398389,2.77274725695804,2.09013004674395,9.27845721519072,47.7989953357322,84.2812786172059,194.03013863481,147.104009078799,441.063800750901,369.211421727596,358.718519090195,319.741102875357,130.328814254862,130.76352017419,153.936204225626,19.3461258972143,16.2232887905815,22.5415471346161,42.766778847516,61.0950334578021,75.4661422019828,95.6768806690013,85.31866553221,116.964052241824,115.993334086492,234.494028025935,18.3529616287703,32.0391162034521,31.4806957338795,55.1779530176728,84.4120059133459,149.210749143912,114.503062705423,163.432308589236,234.475446862622,100.637744569148,185.326191938915,235.588443201493,141.69675052833,147.464673915012,201.661391929887,42.6779869284857,5.11626811780309,2.60743962307241,3.73439188705414,3.75504397261603,12.8979818230198,31.6598042378398,35.904591205835,18.128041572212,17.9386398615508,18.8156627015835,37.524699069904,31.0832967358612,46.8662949804097,45.2373851817817,29.3709069262103,1.96705709207614,5.24279817978992,2.0871576698413,1.40654023910644,4.42624352517024,11.6136626514012,6.31016438832513,9.76096860741596,1.93881057959519,3.58453196928828,4.90157082981267,2.26461224631066,9.71545684019746,12.5670018901864,6.7198922250909,2.24924921495265,7.52282451603824,8.01295216502649,3.74640006513225,6.92874516484649,11.9470624505967,8.25454162926937,10.2790009368015,4.52652191414155,5.90603785761546,6.7635732547664,90.1914743157092,13.4507479906677,11.4079161083111,2.52829406348653,2.10837217149998,4.12542172992747,8.5109901438447,8.46287141947158,13.0652270620582,13.0745591369271,9.04435191575595,13.3776613201553,10.6956863391379,24.6616608782825,165.912897601043,847.751947597008,1.98475558249466,3.2977250588296,8.23468576149118,1.86970067277283,2.38744688006273,0.820704498725306,240.763171056257,1.48340241608408,8.54354403989263,7.63631411463923,9.81530995059472,5.65105371014073,2.7338845544205,5.49067615695654,1.18984900995699,1.6794174278839,0.552799895217695,3.81868247206045,1.58167996790568,5.28630614529807,10.9085394230019,5.64538399239065,18.7791804821713,12.1377911746339,20.0847897412566,2.87931536182433,17.498021394392,14.9121435140862,1.69107881605257,3.13984746692355,2.81279433777066,1.55560950675238,3.61647505737647,2.87225413334323,4.3422178298929,6.51021924219751,2.20204623293993,3.62376181239009,7.20075015644664,5.68820017130721,8.91990947276722,6.47079030138412,3.37794139742267,2.68540043501222,3.3775830312815,2.40390899039938,2.36303243479324,1.31256384932592,1.295515713135,1.81487133246313,2.14407337627455,1.82802499116626,2.33753804363138,9.06921534460846,55.9404602502643,29.426144967908,129.439039216704,3.09103350451505,10.5102186252662,6.22715522508701,3.21552568618599,2.50786052017682,0,0,1.14579102687879,2.06223818812425,3.42541259885321,0.755393897389701,0.675022500231806,3.15224842256954,1.35942722695261,2.07104124700728,0.415149390336707,8.77854721482268,9.21961471072325,14.1001895899611,10.8998844566551,13.420576116851,29.3365680698132,31.5233637575508,33.3755977975488,28.5547849293091,35.4871019846336,25.8418087698924,23.4103768674706,21.5764763604409,20.8490752308876,27.1487404031352,21.670368951688,20.4483773691527,28.0218412546248,26.0542088637883,34.2869252385415,25.3790402807853,22.8898742349428,29.7960154096273,23.9978920059093,25.384382367503,30.0001875511347,22.0978557607788,21.1854417599544,28.0571135828869,25.6251639148216,21.9664995697507,24.5538625901814,21.6911577660352,20.6410073749821,10.2422336954558,34.6218780499204,45.5526634582392,21.4242931917105,13.2354851471709,23.650519233283 | ||
|short_description=p1@Tmem37 | |short_description=p1@Tmem37 | ||
}} | }} |
Latest revision as of 06:22, 26 September 2015
Short description: | p1@Tmem37 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem37_5end |
Coexpression cluster: | MCL_coexpression_mm9:144 |
Association with transcript: | 0bp_to_NM_019432, uc007cjd.1_5end |
EntrezGene: | Tmem37 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 1.03e-11 | 66 |
abdomen element | 2.78e-11 | 49 |
abdominal segment element | 2.78e-11 | 49 |
abdominal segment of trunk | 2.78e-11 | 49 |
abdomen | 2.78e-11 | 49 |
digestive tract diverticulum | 5.47e-11 | 23 |
sac | 5.47e-11 | 23 |
liver | 6.01e-11 | 22 |
epithelial sac | 6.01e-11 | 22 |
digestive gland | 6.01e-11 | 22 |
epithelium of foregut-midgut junction | 6.01e-11 | 22 |
anatomical boundary | 6.01e-11 | 22 |
hepatobiliary system | 6.01e-11 | 22 |
foregut-midgut junction | 6.01e-11 | 22 |
hepatic diverticulum | 6.01e-11 | 22 |
liver primordium | 6.01e-11 | 22 |
septum transversum | 6.01e-11 | 22 |
liver bud | 6.01e-11 | 22 |
intestine | 2.54e-10 | 31 |
trunk region element | 3.66e-10 | 79 |
exocrine gland | 1.90e-09 | 25 |
exocrine system | 1.90e-09 | 25 |
trunk | 2.25e-08 | 90 |
endoderm-derived structure | 2.69e-08 | 118 |
endoderm | 2.69e-08 | 118 |
presumptive endoderm | 2.69e-08 | 118 |
mesenchyme | 4.62e-08 | 61 |
entire embryonic mesenchyme | 4.62e-08 | 61 |
digestive system | 1.63e-07 | 116 |
digestive tract | 1.63e-07 | 116 |
primitive gut | 1.63e-07 | 116 |
gastrointestinal system | 3.41e-07 | 47 |
subdivision of digestive tract | 6.46e-07 | 114 |