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FFCP PHASE1:Mm9::chr8:73280352..73280372,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19339
|EntrezGene=19339
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000130468_5end
|association_with_transcript=0bp_to_ENSMUST00000130468_5end
|cluster_id=chr8:73280352..73280372,+
|description=CAGE_peak_2_at_Rab3a_5end
|description=CAGE_peak_2_at_Rab3a_5end
|id=chr8:73280352..73280372,+
|id=chr8:73280352..73280372,+
|ontology_enrichment_celltype=CL:0000117!4.62e-17!23;CL:0000337!4.62e-17!23;CL:0000540!1.82e-14!33;CL:0000047!1.82e-14!33;CL:0000031!1.82e-14!33;CL:0000404!1.82e-14!33;CL:0000393!1.01e-12!39;CL:0000211!1.01e-12!39;CL:0002319!2.19e-11!43;CL:0000221!7.68e-11!44;CL:0000133!7.68e-11!44;CL:0000055!6.62e-10!50
|ontology_enrichment_celltype=CL:0000117!4.62e-17!23;CL:0000337!4.62e-17!23;CL:0000540!1.82e-14!33;CL:0000047!1.82e-14!33;CL:0000031!1.82e-14!33;CL:0000404!1.82e-14!33;CL:0000393!1.01e-12!39;CL:0000211!1.01e-12!39;CL:0002319!2.19e-11!43;CL:0000221!7.68e-11!44;CL:0000133!7.68e-11!44;CL:0000055!6.62e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.63e-28,23;CL:0000337,1.63e-28,23;CL:0000540,2.92e-18,33;CL:0000047,2.92e-18,33;CL:0000031,2.92e-18,33;CL:0000404,2.92e-18,33;CL:0000393,1.19e-14,39;CL:0000211,1.19e-14,39;CL:0002319,3.12e-14,43;CL:0000221,8.70e-14,44;CL:0000133,8.70e-14,44;CL:0002610,5.61e-07,3;CL:0002614,7.68e-07,3;CL:0002321,8.88e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.81e-31!71;UBERON:0003075!3.81e-31!71;UBERON:0007284!3.81e-31!71;UBERON:0001017!7.21e-31!73;UBERON:0005743!7.21e-31!73;UBERON:0001049!1.72e-30!52;UBERON:0005068!1.72e-30!52;UBERON:0006241!1.72e-30!52;UBERON:0007135!1.72e-30!52;UBERON:0000073!4.46e-30!75;UBERON:0001016!4.46e-30!75;UBERON:0000955!7.17e-29!50;UBERON:0006238!7.17e-29!50;UBERON:0002616!4.18e-28!49;UBERON:0004121!2.29e-25!102;UBERON:0000924!2.29e-25!102;UBERON:0006601!2.29e-25!102;UBERON:0002020!2.58e-25!34;UBERON:0000033!3.38e-25!63;UBERON:0003080!2.17e-23!40;UBERON:0002780!1.46e-22!39;UBERON:0001890!1.46e-22!39;UBERON:0006240!1.46e-22!39;UBERON:0003056!5.20e-22!49;UBERON:0002791!2.45e-21!29;UBERON:0003528!2.45e-21!29;UBERON:0001893!2.45e-21!29;UBERON:0000956!1.07e-15!21;UBERON:0001869!1.07e-15!21;UBERON:0000203!1.07e-15!21;UBERON:0007811!2.96e-14!86;UBERON:0002619!2.85e-13!17;UBERON:0000153!7.67e-12!94;UBERON:0000025!1.74e-10!114;UBERON:0002021!6.21e-10!10;UBERON:0000411!6.21e-10!10;UBERON:0001950!6.21e-10!10;UBERON:0004111!2.43e-09!122;UBERON:0003076!1.83e-07!12;UBERON:0003057!1.83e-07!12;UBERON:0002420!8.60e-07!8;UBERON:0007245!8.60e-07!8;UBERON:0010009!8.60e-07!8;UBERON:0010011!8.60e-07!8;UBERON:0000454!8.60e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.38e-47,54;UBERON:0001049,7.50e-44,52;UBERON:0005068,7.50e-44,52;UBERON:0006241,7.50e-44,52;UBERON:0007135,7.50e-44,52;UBERON:0001017,2.47e-43,73;UBERON:0002020,1.80e-42,34;UBERON:0001016,6.51e-42,75;UBERON:0002346,7.61e-36,64;UBERON:0003075,7.61e-36,64;UBERON:0007284,7.61e-36,64;UBERON:0000955,3.33e-35,47;UBERON:0006238,3.33e-35,47;UBERON:0003528,1.05e-33,29;UBERON:0002791,1.05e-33,29;UBERON:0001893,1.05e-33,29;UBERON:0002616,1.09e-33,46;UBERON:0004121,1.38e-32,95;UBERON:0000924,1.38e-32,95;UBERON:0006601,1.38e-32,95;UBERON:0010371,2.82e-30,73;UBERON:0003080,1.35e-29,40;UBERON:0002780,5.76e-28,39;UBERON:0001890,5.76e-28,39;UBERON:0006240,5.76e-28,39;UBERON:0003056,1.34e-24,49;UBERON:0000956,1.02e-23,21;UBERON:0001869,1.02e-23,21;UBERON:0000203,1.02e-23,21;UBERON:0010314,4.25e-22,92;UBERON:0002619,8.84e-21,17;UBERON:0002021,9.28e-21,10;UBERON:0000411,9.28e-21,10;UBERON:0001950,9.28e-21,10;UBERON:0000025,5.15e-15,114;UBERON:0003076,3.33e-14,12;UBERON:0003057,3.33e-14,12;UBERON:0004111,1.96e-13,122;UBERON:0002240,1.35e-11,6;UBERON:0005174,1.35e-11,6;UBERON:0001137,1.35e-11,6;UBERON:0002420,7.27e-11,8;UBERON:0007245,7.27e-11,8;UBERON:0010009,7.27e-11,8;UBERON:0010011,7.27e-11,8;UBERON:0000454,7.27e-11,8;UBERON:0011216,5.28e-10,194;UBERON:0001948,8.13e-10,5;UBERON:0002315,8.13e-10,5;UBERON:0002950,1.44e-08,4;UBERON:0001891,1.44e-08,4;UBERON:0009616,1.44e-08,4;UBERON:0010286,1.44e-08,4;UBERON:0000483,2.35e-07,174;UBERON:0000119,3.59e-07,176;UBERON:0004684,5.61e-07,3;UBERON:0002275,5.61e-07,3;UBERON:0002038,7.68e-07,3;UBERON:0009663,7.68e-07,3;UBERON:0009661,7.68e-07,3;UBERON:0000125,7.68e-07,3;UBERON:0002308,7.68e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0.219686182734472,1.36100929351998,0,0,0,0,0,0,0,0.515672092277442,1.41621522601718,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,1.14058573539325,2.29510095163874,0.841299845405528,6.56997264128748,3.53389665522582,0.979926393719632,0.958454710182364,1.83843757322004,6.60695285996332,4.08599481872601,6.60508093001847,1.45074916503213,2.37867873366265,3.12548022334056,8.93385596804419,2.8138130501584,4.27835093775068,3.53554302568401,4.27115042397309,2.23679334990361,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.561777680527007,0.170430322578058,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0.593768556259299,0.173485326766136,0.304465478312141,0.691846491768175,0.150722640552623,0,0.125666591329675,0,0,0,0.323533699894818,0,0,0,1.75668478206928,4.60782754989601,0,0,0,0,4.34392854273986,1.83000241127451,0.628271760564322,2.25971616249959,1.79000820131231,4.1557608911912,2.10913641988085,0,0,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0.0680364991513279,0.384341160854549,0.281105173679186,1.03481348295606,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.467061369468678,0,0,0.162137619091711,0,0,0,1.89260953707715,1.3377599609307,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,3.21101179975584,1.28932855251423,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0.584511715822624,0,2.24924921495265,0,0,0.162886959353576,0,1.32745138339963,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.258717367565509,0,0,0.178368817602071,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0,4.63563255026274,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,4.51801474093653,8.28585425712918,8.59343270159095,9.28007184655913,5.48066015816514,7.55393897389701,10.8003600037089,8.10578165803597,6.79713613476307,5.69536342927002,0,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.888986911206461,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.512201219238954,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0.70990322463735,0,0.290692833264657,0.188218760830661,0,0.365855945745545,0.263069711437843,0.135804113845862,1.68342681497322,0.355905054372522,0.394017929502254,0.818462086339379,0,0.192906610981141,0.499621155875892,0,0.429742108096597,0.382576664137687,0.220591419119515,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0.219686182734472,1.36100929351998,0,0,0,0,0,0,0,0.515672092277442,1.41621522601718,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,1.14058573539325,2.29510095163874,0.841299845405528,6.56997264128748,3.53389665522582,0.979926393719632,0.958454710182364,1.83843757322004,6.60695285996332,4.08599481872601,6.60508093001847,1.45074916503213,2.37867873366265,3.12548022334056,8.93385596804419,2.8138130501584,4.27835093775068,3.53554302568401,4.27115042397309,2.23679334990361,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.561777680527007,0.170430322578058,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0.593768556259299,0.173485326766136,0.304465478312141,0.691846491768175,0.150722640552623,0,0.125666591329675,0,0,0,0.323533699894818,0,0,0,1.75668478206928,4.60782754989601,0,0,0,0,4.34392854273986,1.83000241127451,0.628271760564322,2.25971616249959,1.79000820131231,4.1557608911912,2.10913641988085,0,0,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0.0680364991513279,0.384341160854549,0.281105173679186,1.03481348295606,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.467061369468678,0,0,0.162137619091711,0,0,0,1.89260953707715,1.3377599609307,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,3.21101179975584,1.28932855251423,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0.584511715822624,0,2.24924921495265,0,0,0.162886959353576,0,1.32745138339963,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.258717367565509,0,0,0.178368817602071,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0,4.63563255026274,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,4.51801474093653,8.28585425712918,8.59343270159095,9.28007184655913,5.48066015816514,7.55393897389701,10.8003600037089,8.10578165803597,6.79713613476307,5.69536342927002,0,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.888986911206461,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.512201219238954,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0.70990322463735,0,0.290692833264657,0.188218760830661,0,0.365855945745545,0.263069711437843,0.135804113845862,1.68342681497322,0.355905054372522,0.394017929502254,0.818462086339379,0,0.192906610981141,0.499621155875892,0,0.429742108096597,0.382576664137687,0.220591419119515,0
|short_description=p2@Rab3a
|short_description=p2@Rab3a
}}
}}

Latest revision as of 17:53, 25 September 2015

Short description:p2@Rab3a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab3a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000130468_5end
EntrezGene:Rab3a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rab3a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.38e-4754
neural tube7.50e-4452
neural rod7.50e-4452
future spinal cord7.50e-4452
neural keel7.50e-4452
central nervous system2.47e-4373
gray matter1.80e-4234
nervous system6.51e-4275
neurectoderm7.61e-3664
neural plate7.61e-3664
presumptive neural plate7.61e-3664
brain3.33e-3547
future brain3.33e-3547
brain grey matter1.05e-3329
regional part of telencephalon1.05e-3329
telencephalon1.05e-3329
regional part of brain1.09e-3346
ectoderm-derived structure1.38e-3295
ectoderm1.38e-3295
presumptive ectoderm1.38e-3295
ecto-epithelium2.82e-3073
anterior neural tube1.35e-2940
regional part of forebrain5.76e-2839
forebrain5.76e-2839
future forebrain5.76e-2839
pre-chordal neural plate1.34e-2449
cerebral cortex1.02e-2321
cerebral hemisphere1.02e-2321
pallium1.02e-2321
structure with developmental contribution from neural crest4.25e-2292
regional part of cerebral cortex8.84e-2117
occipital lobe9.28e-2110
visual cortex9.28e-2110
neocortex9.28e-2110
tube5.15e-15114
posterior neural tube3.33e-1412
chordal neural plate3.33e-1412
anatomical conduit1.96e-13122
spinal cord1.35e-116
dorsal region element1.35e-116
dorsum1.35e-116
basal ganglion7.27e-118
nuclear complex of neuraxis7.27e-118
aggregate regional part of brain7.27e-118
collection of basal ganglia7.27e-118
cerebral subcortex7.27e-118
organ system subdivision5.28e-10194
regional part of spinal cord8.13e-105
gray matter of spinal cord8.13e-105
regional part of midbrain1.44e-084
midbrain1.44e-084
presumptive midbrain1.44e-084
midbrain neural tube1.44e-084
epithelium2.35e-07174
cell layer3.59e-07176
raphe nuclei5.61e-073
reticular formation5.61e-073
substantia nigra7.68e-073
telencephalic nucleus7.68e-073
midbrain nucleus7.68e-073
neural nucleus7.68e-073
nucleus of brain7.68e-073
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