FFCP PHASE1:Mm9::chr1:84692723..84692734,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227325 | |EntrezGene=227325 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=Q8JZM4 | |UniProt=Q8JZM4 | ||
|association_with_transcript=61bp_to_ENSMUST00000049126,NM_152915,uc007bsw.1,uc007bsx.1_5end | |association_with_transcript=61bp_to_ENSMUST00000049126,NM_152915,uc007bsw.1,uc007bsx.1_5end | ||
|cluster_id=chr1:84692723..84692734,- | |||
|description=CAGE_peak_9_at_Dner_5end | |description=CAGE_peak_9_at_Dner_5end | ||
|id=chr1:84692723..84692734,- | |id=chr1:84692723..84692734,- | ||
|ontology_enrichment_celltype=CL:0000117!1.16e-18!23;CL:0000337!1.16e-18!23;CL:0000540!5.60e-12!33;CL:0000047!5.60e-12!33;CL:0000031!5.60e-12!33;CL:0000404!5.60e-12!33;CL:0002319!2.51e-09!43;CL:0000393!4.15e-09!39;CL:0000211!4.15e-09!39;CL:0000221!5.88e-09!44;CL:0000133!5.88e-09!44;CL:0000055!4.44e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.16e-18!23;CL:0000337!1.16e-18!23;CL:0000540!5.60e-12!33;CL:0000047!5.60e-12!33;CL:0000031!5.60e-12!33;CL:0000404!5.60e-12!33;CL:0002319!2.51e-09!43;CL:0000393!4.15e-09!39;CL:0000211!4.15e-09!39;CL:0000221!5.88e-09!44;CL:0000133!5.88e-09!44;CL:0000055!4.44e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.23e-37,23;CL:0000337,3.23e-37,23;CL:0000540,7.33e-25,33;CL:0000047,7.33e-25,33;CL:0000031,7.33e-25,33;CL:0000404,7.33e-25,33;CL:0000393,1.74e-20,39;CL:0000211,1.74e-20,39;CL:0002319,3.02e-18,43;CL:0000221,9.45e-18,44;CL:0000133,9.45e-18,44;CL:0002612,4.94e-11,3;CL:0002610,2.15e-10,3;CL:0000120,4.42e-10,3;CL:0002613,4.42e-10,3;CL:0002614,5.09e-10,3;CL:0002321,7.86e-10,70;CL:0002611,2.60e-07,2;CL:0000723,9.41e-07,91;CL:0000048,9.41e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.00e-20!63;UBERON:0001017!2.20e-19!73;UBERON:0005743!2.20e-19!73;UBERON:0000073!1.68e-18!75;UBERON:0001016!1.68e-18!75;UBERON:0002346!3.20e-18!71;UBERON:0003075!3.20e-18!71;UBERON:0007284!3.20e-18!71;UBERON:0004121!4.55e-18!102;UBERON:0000924!4.55e-18!102;UBERON:0006601!4.55e-18!102;UBERON:0001049!1.87e-16!52;UBERON:0005068!1.87e-16!52;UBERON:0006241!1.87e-16!52;UBERON:0007135!1.87e-16!52;UBERON:0003056!1.54e-14!49;UBERON:0000955!1.71e-14!50;UBERON:0006238!1.71e-14!50;UBERON:0002616!1.12e-13!49;UBERON:0002020!2.80e-13!34;UBERON:0007811!2.05e-11!86;UBERON:0003076!2.08e-10!12;UBERON:0003057!2.08e-10!12;UBERON:0000153!4.35e-10!94;UBERON:0002420!6.24e-10!8;UBERON:0007245!6.24e-10!8;UBERON:0010009!6.24e-10!8;UBERON:0010011!6.24e-10!8;UBERON:0000454!6.24e-10!8;UBERON:0003080!1.28e-08!40;UBERON:0002791!1.41e-08!29;UBERON:0003528!1.41e-08!29;UBERON:0001893!1.41e-08!29;UBERON:0002240!1.74e-08!6;UBERON:0005174!1.74e-08!6;UBERON:0001137!1.74e-08!6;UBERON:0000970!1.81e-08!9;UBERON:0000019!1.81e-08!9;UBERON:0000047!1.81e-08!9;UBERON:0004088!1.81e-08!9;UBERON:0002104!1.81e-08!9;UBERON:0001456!1.81e-08!9;UBERON:0003072!1.81e-08!9;UBERON:0003071!1.81e-08!9;UBERON:0004128!1.81e-08!9;UBERON:0002298!5.64e-08!6;UBERON:0002780!6.37e-08!39;UBERON:0001890!6.37e-08!39;UBERON:0006240!6.37e-08!39;UBERON:0001948!1.46e-07!5;UBERON:0002315!1.46e-07!5;UBERON:0000020!4.88e-07!12;UBERON:0001032!4.88e-07!12;UBERON:0004456!4.88e-07!12 | |ontology_enrichment_uberon=UBERON:0000033!4.00e-20!63;UBERON:0001017!2.20e-19!73;UBERON:0005743!2.20e-19!73;UBERON:0000073!1.68e-18!75;UBERON:0001016!1.68e-18!75;UBERON:0002346!3.20e-18!71;UBERON:0003075!3.20e-18!71;UBERON:0007284!3.20e-18!71;UBERON:0004121!4.55e-18!102;UBERON:0000924!4.55e-18!102;UBERON:0006601!4.55e-18!102;UBERON:0001049!1.87e-16!52;UBERON:0005068!1.87e-16!52;UBERON:0006241!1.87e-16!52;UBERON:0007135!1.87e-16!52;UBERON:0003056!1.54e-14!49;UBERON:0000955!1.71e-14!50;UBERON:0006238!1.71e-14!50;UBERON:0002616!1.12e-13!49;UBERON:0002020!2.80e-13!34;UBERON:0007811!2.05e-11!86;UBERON:0003076!2.08e-10!12;UBERON:0003057!2.08e-10!12;UBERON:0000153!4.35e-10!94;UBERON:0002420!6.24e-10!8;UBERON:0007245!6.24e-10!8;UBERON:0010009!6.24e-10!8;UBERON:0010011!6.24e-10!8;UBERON:0000454!6.24e-10!8;UBERON:0003080!1.28e-08!40;UBERON:0002791!1.41e-08!29;UBERON:0003528!1.41e-08!29;UBERON:0001893!1.41e-08!29;UBERON:0002240!1.74e-08!6;UBERON:0005174!1.74e-08!6;UBERON:0001137!1.74e-08!6;UBERON:0000970!1.81e-08!9;UBERON:0000019!1.81e-08!9;UBERON:0000047!1.81e-08!9;UBERON:0004088!1.81e-08!9;UBERON:0002104!1.81e-08!9;UBERON:0001456!1.81e-08!9;UBERON:0003072!1.81e-08!9;UBERON:0003071!1.81e-08!9;UBERON:0004128!1.81e-08!9;UBERON:0002298!5.64e-08!6;UBERON:0002780!6.37e-08!39;UBERON:0001890!6.37e-08!39;UBERON:0006240!6.37e-08!39;UBERON:0001948!1.46e-07!5;UBERON:0002315!1.46e-07!5;UBERON:0000020!4.88e-07!12;UBERON:0001032!4.88e-07!12;UBERON:0004456!4.88e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.25e-25,73;UBERON:0000073,1.80e-24,54;UBERON:0001016,4.48e-24,75;UBERON:0004121,2.82e-21,95;UBERON:0000924,2.82e-21,95;UBERON:0006601,2.82e-21,95;UBERON:0003076,6.30e-21,12;UBERON:0003057,6.30e-21,12;UBERON:0001049,2.44e-18,52;UBERON:0005068,2.44e-18,52;UBERON:0006241,2.44e-18,52;UBERON:0007135,2.44e-18,52;UBERON:0002420,3.25e-18,8;UBERON:0007245,3.25e-18,8;UBERON:0010009,3.25e-18,8;UBERON:0010011,3.25e-18,8;UBERON:0000454,3.25e-18,8;UBERON:0002346,1.49e-17,64;UBERON:0003075,1.49e-17,64;UBERON:0007284,1.49e-17,64;UBERON:0001948,1.06e-16,5;UBERON:0002315,1.06e-16,5;UBERON:0010371,7.32e-15,73;UBERON:0002240,7.22e-14,6;UBERON:0005174,7.22e-14,6;UBERON:0001137,7.22e-14,6;UBERON:0002950,1.65e-12,4;UBERON:0001891,1.65e-12,4;UBERON:0009616,1.65e-12,4;UBERON:0010286,1.65e-12,4;UBERON:0000955,7.28e-12,47;UBERON:0006238,7.28e-12,47;UBERON:0002020,3.00e-11,34;UBERON:0002257,4.94e-11,3;UBERON:0010314,6.62e-11,92;UBERON:0002616,1.49e-10,46;UBERON:0004684,2.15e-10,3;UBERON:0002275,2.15e-10,3;UBERON:0000369,4.73e-10,5;UBERON:0002435,4.73e-10,5;UBERON:0000204,4.73e-10,5;UBERON:0010082,4.73e-10,5;UBERON:0002038,5.09e-10,3;UBERON:0009663,5.09e-10,3;UBERON:0009661,5.09e-10,3;UBERON:0000125,5.09e-10,3;UBERON:0002308,5.09e-10,3;UBERON:0004733,7.19e-09,6;UBERON:0004732,7.19e-09,6;UBERON:0002028,7.19e-09,6;UBERON:0007277,7.19e-09,6;UBERON:0002256,2.60e-07,2;UBERON:0001896,7.50e-07,2;UBERON:0002298,7.50e-07,2;UBERON:0005290,7.50e-07,2;UBERON:0010096,7.50e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.42779753031517,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,3.99911378165325,1.54607978666129,0.122490799214954,0.287536413054709,0,3.30347642998166,1.91531007127782,2.61131106535614,1.97829431595291,1.73826522844578,3.12548022334056,2.51264699101243,1.68828783009504,2.13917546887534,5.30331453852602,6.69146899755784,3.72798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.517382241612,17.3840766655168,0,0,0,0,1.49790639404823,0.457500602818626,1.38219787324151,0.695297280769106,0.255715457330331,2.70124457927428,1.78465389374533,0,0,0,0.210441855886474,0.130120442962704,0.229902104433473,1.0803727788321,0.60281927134286,0.612328492361951,1.2811372028485,0.749613796477831,0.776110112217047,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.68741272937475,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0.798049746802062,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.0936415074698824,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0.38581844092741,0,0,0,0,0.476872379894642,0,0.376437521661322,0.25384382367503,0,0,0.407412341537585,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,1.49886346762768,0.467863216890817,0,0,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.42779753031517,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,3.99911378165325,1.54607978666129,0.122490799214954,0.287536413054709,0,3.30347642998166,1.91531007127782,2.61131106535614,1.97829431595291,1.73826522844578,3.12548022334056,2.51264699101243,1.68828783009504,2.13917546887534,5.30331453852602,6.69146899755784,3.72798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.517382241612,17.3840766655168,0,0,0,0,1.49790639404823,0.457500602818626,1.38219787324151,0.695297280769106,0.255715457330331,2.70124457927428,1.78465389374533,0,0,0,0.210441855886474,0.130120442962704,0.229902104433473,1.0803727788321,0.60281927134286,0.612328492361951,1.2811372028485,0.749613796477831,0.776110112217047,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.68741272937475,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0.798049746802062,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.0936415074698824,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0.38581844092741,0,0,0,0,0.476872379894642,0,0.376437521661322,0.25384382367503,0,0,0.407412341537585,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,1.49886346762768,0.467863216890817,0,0,0,0.231867835620421 | ||
|short_description=p9@Dner | |short_description=p9@Dner | ||
}} | }} |
Latest revision as of 16:52, 1 October 2015
Short description: | p9@Dner |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Dner_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 61bp_to_ENSMUST00000049126, NM_152915, uc007bsw.1, uc007bsx.1_5end |
EntrezGene: | Dner |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.23e-37 | 23 |
neuroblast (sensu Vertebrata) | 3.23e-37 | 23 |
neuron | 7.33e-25 | 33 |
neuronal stem cell | 7.33e-25 | 33 |
neuroblast | 7.33e-25 | 33 |
electrically signaling cell | 7.33e-25 | 33 |
electrically responsive cell | 1.74e-20 | 39 |
electrically active cell | 1.74e-20 | 39 |
neural cell | 3.02e-18 | 43 |
ectodermal cell | 9.45e-18 | 44 |
neurectodermal cell | 9.45e-18 | 44 |
neuron of the ventral spinal cord | 4.94e-11 | 3 |
raphe nuclei neuron | 2.15e-10 | 3 |
granule cell | 4.42e-10 | 3 |
striatum neuron | 4.42e-10 | 3 |
neuron of the substantia nigra | 5.09e-10 | 3 |
embryonic cell | 7.86e-10 | 70 |
neuron of the dorsal spinal cord | 2.60e-07 | 2 |
somatic stem cell | 9.41e-07 | 91 |
multi fate stem cell | 9.41e-07 | 91 |