FFCP PHASE1:Mm9::chr2:20890358..20890371,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=433408 | |EntrezGene=433408 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2852 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-129bp_to_NR_033225,uc012brm.1_5end | |association_with_transcript=-129bp_to_NR_033225,uc012brm.1_5end | ||
|cluster_id=chr2:20890358..20890371,+ | |||
|description=CAGE_peak_3_at_Gm13375_5end | |description=CAGE_peak_3_at_Gm13375_5end | ||
|id=chr2:20890358..20890371,+ | |id=chr2:20890358..20890371,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.77e-16!44;CL:0000133!3.77e-16!44;CL:0002319!4.68e-16!43;CL:0000117!8.65e-14!23;CL:0000337!8.65e-14!23;CL:0000540!5.51e-12!33;CL:0000047!5.51e-12!33;CL:0000031!5.51e-12!33;CL:0000404!5.51e-12!33;CL:0000055!5.97e-12!50;CL:0000393!7.00e-09!39;CL:0000211!7.00e-09!39;CL:0002321!4.52e-08!70;CL:0000220!4.52e-08!70 | |ontology_enrichment_celltype=CL:0000221!3.77e-16!44;CL:0000133!3.77e-16!44;CL:0002319!4.68e-16!43;CL:0000117!8.65e-14!23;CL:0000337!8.65e-14!23;CL:0000540!5.51e-12!33;CL:0000047!5.51e-12!33;CL:0000031!5.51e-12!33;CL:0000404!5.51e-12!33;CL:0000055!5.97e-12!50;CL:0000393!7.00e-09!39;CL:0000211!7.00e-09!39;CL:0002321!4.52e-08!70;CL:0000220!4.52e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.14e-26,43;CL:0000221,1.98e-25,44;CL:0000133,1.98e-25,44;CL:0000117,2.49e-23,23;CL:0000337,2.49e-23,23;CL:0000540,6.54e-18,33;CL:0000047,6.54e-18,33;CL:0000031,6.54e-18,33;CL:0000404,6.54e-18,33;CL:0002321,7.76e-15,70;CL:0000393,3.52e-14,39;CL:0000211,3.52e-14,39;CL:0002453,5.27e-12,8;CL:0002609,1.46e-10,6;CL:0000333,2.94e-09,10;CL:0000095,2.94e-09,10;CL:0000243,2.94e-09,10;CL:0000123,2.94e-09,10;CL:0000125,2.94e-09,10;CL:0000030,2.94e-09,10;CL:0000339,2.94e-09,10;CL:0000128,7.34e-09,6;CL:0000126,7.34e-09,6;CL:0000127,7.34e-09,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.13e-27!73;UBERON:0005743!5.13e-27!73;UBERON:0000073!1.57e-26!75;UBERON:0001016!1.57e-26!75;UBERON:0004121!8.25e-24!102;UBERON:0000924!8.25e-24!102;UBERON:0006601!8.25e-24!102;UBERON:0002346!1.41e-23!71;UBERON:0003075!1.41e-23!71;UBERON:0007284!1.41e-23!71;UBERON:0000033!1.54e-21!63;UBERON:0001049!8.23e-21!52;UBERON:0005068!8.23e-21!52;UBERON:0006241!8.23e-21!52;UBERON:0007135!8.23e-21!52;UBERON:0000955!2.03e-19!50;UBERON:0006238!2.03e-19!50;UBERON:0002616!6.65e-19!49;UBERON:0003056!1.90e-18!49;UBERON:0003080!9.96e-15!40;UBERON:0002020!1.75e-14!34;UBERON:0002780!3.47e-14!39;UBERON:0001890!3.47e-14!39;UBERON:0006240!3.47e-14!39;UBERON:0002791!8.31e-12!29;UBERON:0003528!8.31e-12!29;UBERON:0001893!8.31e-12!29;UBERON:0000025!3.96e-11!114;UBERON:0007811!1.13e-10!86;UBERON:0004111!3.39e-10!122;UBERON:0000153!4.79e-09!94;UBERON:0000956!3.40e-08!21;UBERON:0001869!3.40e-08!21;UBERON:0000203!3.40e-08!21;UBERON:0003076!6.87e-07!12;UBERON:0003057!6.87e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!5.13e-27!73;UBERON:0005743!5.13e-27!73;UBERON:0000073!1.57e-26!75;UBERON:0001016!1.57e-26!75;UBERON:0004121!8.25e-24!102;UBERON:0000924!8.25e-24!102;UBERON:0006601!8.25e-24!102;UBERON:0002346!1.41e-23!71;UBERON:0003075!1.41e-23!71;UBERON:0007284!1.41e-23!71;UBERON:0000033!1.54e-21!63;UBERON:0001049!8.23e-21!52;UBERON:0005068!8.23e-21!52;UBERON:0006241!8.23e-21!52;UBERON:0007135!8.23e-21!52;UBERON:0000955!2.03e-19!50;UBERON:0006238!2.03e-19!50;UBERON:0002616!6.65e-19!49;UBERON:0003056!1.90e-18!49;UBERON:0003080!9.96e-15!40;UBERON:0002020!1.75e-14!34;UBERON:0002780!3.47e-14!39;UBERON:0001890!3.47e-14!39;UBERON:0006240!3.47e-14!39;UBERON:0002791!8.31e-12!29;UBERON:0003528!8.31e-12!29;UBERON:0001893!8.31e-12!29;UBERON:0000025!3.96e-11!114;UBERON:0007811!1.13e-10!86;UBERON:0004111!3.39e-10!122;UBERON:0000153!4.79e-09!94;UBERON:0000956!3.40e-08!21;UBERON:0001869!3.40e-08!21;UBERON:0000203!3.40e-08!21;UBERON:0003076!6.87e-07!12;UBERON:0003057!6.87e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.69e-33,73;UBERON:0001016,1.53e-31,75;UBERON:0004121,2.58e-29,95;UBERON:0000924,2.58e-29,95;UBERON:0006601,2.58e-29,95;UBERON:0002346,1.60e-27,64;UBERON:0003075,1.60e-27,64;UBERON:0007284,1.60e-27,64;UBERON:0010314,1.96e-24,92;UBERON:0000073,8.83e-24,54;UBERON:0001049,4.12e-23,52;UBERON:0005068,4.12e-23,52;UBERON:0006241,4.12e-23,52;UBERON:0007135,4.12e-23,52;UBERON:0010371,8.68e-23,73;UBERON:0002020,1.11e-19,34;UBERON:0000955,6.48e-19,47;UBERON:0006238,6.48e-19,47;UBERON:0002616,5.88e-18,46;UBERON:0003056,1.78e-16,49;UBERON:0003528,1.27e-15,29;UBERON:0002791,1.27e-15,29;UBERON:0001893,1.27e-15,29;UBERON:0003080,6.86e-14,40;UBERON:0002780,6.31e-13,39;UBERON:0001890,6.31e-13,39;UBERON:0006240,6.31e-13,39;UBERON:0000025,9.49e-11,114;UBERON:0003076,1.07e-10,12;UBERON:0003057,1.07e-10,12;UBERON:0001954,2.09e-10,7;UBERON:0003022,2.09e-10,7;UBERON:0002421,2.09e-10,7;UBERON:0000349,2.09e-10,7;UBERON:0002600,2.09e-10,7;UBERON:0004111,4.62e-10,122;UBERON:0000956,5.89e-10,21;UBERON:0001869,5.89e-10,21;UBERON:0000203,5.89e-10,21;UBERON:0000369,7.67e-09,5;UBERON:0002435,7.67e-09,5;UBERON:0000204,7.67e-09,5;UBERON:0010082,7.67e-09,5;UBERON:0000483,1.61e-08,174;UBERON:0000119,2.74e-08,176;UBERON:0002619,3.30e-07,17;UBERON:0002420,3.63e-07,8;UBERON:0007245,3.63e-07,8;UBERON:0010009,3.63e-07,8;UBERON:0010011,3.63e-07,8;UBERON:0000454,3.63e-07,8 | |||
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| ||
|short_description=p3@Gm13375 | |short_description=p3@Gm13375 | ||
}} | }} |
Latest revision as of 08:57, 26 September 2015
Short description: | p3@Gm13375 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm13375_5end |
Coexpression cluster: | MCL_coexpression_mm9:2852 |
Association with transcript: | -129bp_to_NR_033225, uc012brm.1_5end |
EntrezGene: | Gm13375 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.14e-26 | 43 |
ectodermal cell | 1.98e-25 | 44 |
neurectodermal cell | 1.98e-25 | 44 |
CNS neuron (sensu Vertebrata) | 2.49e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.49e-23 | 23 |
neuron | 6.54e-18 | 33 |
neuronal stem cell | 6.54e-18 | 33 |
neuroblast | 6.54e-18 | 33 |
electrically signaling cell | 6.54e-18 | 33 |
embryonic cell | 7.76e-15 | 70 |
electrically responsive cell | 3.52e-14 | 39 |
electrically active cell | 3.52e-14 | 39 |
oligodendrocyte precursor cell | 5.27e-12 | 8 |
neuron of cerebral cortex | 1.46e-10 | 6 |
migratory neural crest cell | 2.94e-09 | 10 |
neuron associated cell | 2.94e-09 | 10 |
glial cell (sensu Vertebrata) | 2.94e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 2.94e-09 | 10 |
glial cell | 2.94e-09 | 10 |
glioblast | 2.94e-09 | 10 |
glioblast (sensu Vertebrata) | 2.94e-09 | 10 |
oligodendrocyte | 7.34e-09 | 6 |
macroglial cell | 7.34e-09 | 6 |
astrocyte | 7.34e-09 | 6 |