FFCP PHASE1:Mm9::chr4:46551738..46551739,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=426 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:46551738..46551739,+ | |||
|description=CAGE_peak_at_chr4:46551738..46551739,+ | |description=CAGE_peak_at_chr4:46551738..46551739,+ | ||
|id=chr4:46551738..46551739,+ | |id=chr4:46551738..46551739,+ | ||
|ontology_enrichment_celltype=CL:0000181!3.46e-15!5;CL:0000417!3.46e-15!5;CL:0000668!3.46e-15!5;CL:0000412!3.46e-15!5;CL:0000182!3.46e-15!5;CL:0000057!9.82e-10!1;CL:0000632!9.82e-10!1;CL:0000414!3.21e-07!11 | |ontology_enrichment_celltype=CL:0000181!3.46e-15!5;CL:0000417!3.46e-15!5;CL:0000668!3.46e-15!5;CL:0000412!3.46e-15!5;CL:0000182!3.46e-15!5;CL:0000057!9.82e-10!1;CL:0000632!9.82e-10!1;CL:0000414!3.21e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.09e-26,5;CL:0000057,3.44e-16,1;CL:0000632,3.44e-16,1;CL:0000223,3.53e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.31e-23!22;UBERON:0007499!4.31e-23!22;UBERON:0006925!4.31e-23!22;UBERON:0009497!4.31e-23!22;UBERON:0000015!4.31e-23!22;UBERON:0002423!4.31e-23!22;UBERON:0006235!4.31e-23!22;UBERON:0008835!4.31e-23!22;UBERON:0003894!4.31e-23!22;UBERON:0004161!4.31e-23!22;UBERON:0008836!4.31e-23!22;UBERON:0009854!4.51e-22!23;UBERON:0009856!4.51e-22!23;UBERON:0002365!2.83e-20!25;UBERON:0002330!2.83e-20!25;UBERON:0003914!1.47e-10!47;UBERON:0005256!1.47e-10!47;UBERON:0005172!4.17e-10!49;UBERON:0005173!4.17e-10!49;UBERON:0002417!4.17e-10!49;UBERON:0000916!4.17e-10!49;UBERON:0005057!1.09e-09!51;UBERON:0003929!6.10e-09!55;UBERON:0002368!3.81e-08!60;UBERON:0002530!1.80e-07!65;UBERON:0000490!2.39e-07!66;UBERON:0009569!2.39e-07!66;UBERON:0005911!5.31e-07!69;UBERON:0002405!6.83e-07!70 | |ontology_enrichment_uberon=UBERON:0002107!4.31e-23!22;UBERON:0007499!4.31e-23!22;UBERON:0006925!4.31e-23!22;UBERON:0009497!4.31e-23!22;UBERON:0000015!4.31e-23!22;UBERON:0002423!4.31e-23!22;UBERON:0006235!4.31e-23!22;UBERON:0008835!4.31e-23!22;UBERON:0003894!4.31e-23!22;UBERON:0004161!4.31e-23!22;UBERON:0008836!4.31e-23!22;UBERON:0009854!4.51e-22!23;UBERON:0009856!4.51e-22!23;UBERON:0002365!2.83e-20!25;UBERON:0002330!2.83e-20!25;UBERON:0003914!1.47e-10!47;UBERON:0005256!1.47e-10!47;UBERON:0005172!4.17e-10!49;UBERON:0005173!4.17e-10!49;UBERON:0002417!4.17e-10!49;UBERON:0000916!4.17e-10!49;UBERON:0005057!1.09e-09!51;UBERON:0003929!6.10e-09!55;UBERON:0002368!3.81e-08!60;UBERON:0002530!1.80e-07!65;UBERON:0000490!2.39e-07!66;UBERON:0009569!2.39e-07!66;UBERON:0005911!5.31e-07!69;UBERON:0002405!6.83e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.96e-24,22;UBERON:0007499,3.96e-24,22;UBERON:0006925,3.96e-24,22;UBERON:0009497,3.96e-24,22;UBERON:0000015,3.96e-24,22;UBERON:0002423,3.96e-24,22;UBERON:0006235,3.96e-24,22;UBERON:0008835,3.96e-24,22;UBERON:0003894,3.96e-24,22;UBERON:0004161,3.96e-24,22;UBERON:0008836,3.96e-24,22;UBERON:0009854,4.18e-23,23;UBERON:0009856,4.18e-23,23;UBERON:0002365,2.66e-21,25;UBERON:0002330,2.66e-21,25;UBERON:0005256,4.78e-12,45;UBERON:0003914,1.50e-11,47;UBERON:0005172,4.27e-11,49;UBERON:0005173,4.27e-11,49;UBERON:0002417,4.27e-11,49;UBERON:0000916,4.27e-11,49;UBERON:0003929,6.31e-10,55;UBERON:0002368,3.96e-09,60;UBERON:0003104,5.52e-09,61;UBERON:0009142,5.52e-09,61;UBERON:0002530,1.88e-08,65;UBERON:0000490,2.50e-08,66;UBERON:0009569,2.50e-08,66;UBERON:0005911,5.59e-08,69;UBERON:0000949,1.17e-07,72;UBERON:0005177,5.28e-07,79;UBERON:0001041,6.41e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,0,1.61910957491345,1.94932925234301,1.79210754838934,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0.252578877947112,3.04975602987251,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,0,1.61910957491345,1.94932925234301,1.79210754838934,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0.252578877947112,3.04975602987251,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:46551738..46551739,+ | |short_description=p@chr4:46551738..46551739,+ | ||
}} | }} |
Latest revision as of 13:13, 5 August 2015
Short description: | p@chr4:46551738..46551739, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:46551738..46551739, + |
Coexpression cluster: | MCL_coexpression_mm9:426 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.09e-26 | 5 |
fibroblast | 3.44e-16 | 1 |
hepatic stellate cell | 3.44e-16 | 1 |
endodermal cell | 3.53e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 3.96e-24 | 22 |
epithelial sac | 3.96e-24 | 22 |
digestive gland | 3.96e-24 | 22 |
epithelium of foregut-midgut junction | 3.96e-24 | 22 |
anatomical boundary | 3.96e-24 | 22 |
hepatobiliary system | 3.96e-24 | 22 |
foregut-midgut junction | 3.96e-24 | 22 |
hepatic diverticulum | 3.96e-24 | 22 |
liver primordium | 3.96e-24 | 22 |
septum transversum | 3.96e-24 | 22 |
liver bud | 3.96e-24 | 22 |
digestive tract diverticulum | 4.18e-23 | 23 |
sac | 4.18e-23 | 23 |
exocrine gland | 2.66e-21 | 25 |
exocrine system | 2.66e-21 | 25 |
trunk mesenchyme | 4.78e-12 | 45 |
epithelial tube | 1.50e-11 | 47 |
abdomen element | 4.27e-11 | 49 |
abdominal segment element | 4.27e-11 | 49 |
abdominal segment of trunk | 4.27e-11 | 49 |
abdomen | 4.27e-11 | 49 |
gut epithelium | 6.31e-10 | 55 |
endocrine gland | 3.96e-09 | 60 |
mesenchyme | 5.52e-09 | 61 |
entire embryonic mesenchyme | 5.52e-09 | 61 |
gland | 1.88e-08 | 65 |
unilaminar epithelium | 2.50e-08 | 66 |
subdivision of trunk | 2.50e-08 | 66 |
endo-epithelium | 5.59e-08 | 69 |
endocrine system | 1.17e-07 | 72 |
trunk region element | 5.28e-07 | 79 |
foregut | 6.41e-07 | 80 |