FFCP PHASE1:Hg19::chr10:105846145..105846168,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1308 | |EntrezGene=1308 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2194 | |HGNC=2194 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMD9 | |UniProt=Q9UMD9 | ||
|association_with_transcript=-385bp_to_ENST00000353479,ENST00000369733_5end | |association_with_transcript=-385bp_to_ENST00000353479,ENST00000369733_5end | ||
|cluster_id=chr10:105846145..105846168,- | |||
|description=CAGE_peak_8_at_COL17A1_5end | |description=CAGE_peak_8_at_COL17A1_5end | ||
|id=chr10:105846145..105846168,- | |id=chr10:105846145..105846168,- | ||
|ontology_enrichment_celltype=CL:0002076!2.29e-20!43;CL:0000066!3.40e-19!254;CL:0002368!9.41e-19!13;CL:0002159!1.78e-15!13;CL:0000244!1.95e-14!4;CL:0000731!1.95e-14!4;CL:0000223!1.27e-13!59;CL:0002621!1.38e-11!3;CL:0002166!3.73e-11!3;CL:0000349!3.86e-11!3;CL:0002577!3.86e-11!3;CL:0002328!3.32e-10!3;CL:0000240!5.29e-09!6;CL:0000311!5.29e-09!6;CL:0000079!5.29e-09!6;CL:0000237!5.29e-09!6;CL:0000036!5.29e-09!6;CL:0000357!5.29e-09!6;CL:0000114!5.29e-09!6;CL:0002202!6.25e-09!9;CL:0002632!6.25e-09!9;CL:0002536!1.93e-08!2;CL:0002251!6.02e-07!21;CL:0000362!8.97e-07!8 | |ontology_enrichment_celltype=CL:0002076!2.29e-20!43;CL:0000066!3.40e-19!254;CL:0002368!9.41e-19!13;CL:0002159!1.78e-15!13;CL:0000244!1.95e-14!4;CL:0000731!1.95e-14!4;CL:0000223!1.27e-13!59;CL:0002621!1.38e-11!3;CL:0002166!3.73e-11!3;CL:0000349!3.86e-11!3;CL:0002577!3.86e-11!3;CL:0002328!3.32e-10!3;CL:0000240!5.29e-09!6;CL:0000311!5.29e-09!6;CL:0000079!5.29e-09!6;CL:0000237!5.29e-09!6;CL:0000036!5.29e-09!6;CL:0000357!5.29e-09!6;CL:0000114!5.29e-09!6;CL:0002202!6.25e-09!9;CL:0002632!6.25e-09!9;CL:0002536!1.93e-08!2;CL:0002251!6.02e-07!21;CL:0000362!8.97e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000244;2.31e-22;4!CL:0000731;2.31e-22;4!CL:0000349;3.52e-22;19!CL:0002621;1.11e-17;3!CL:0002577;4.21e-17;3!CL:0002159;2.14e-13;14!CL:0002536;1.15e-12;2!CL:0002076;2.47e-11;42!CL:0002368;4.69e-10;13!CL:0002166;1.38e-08;3!CL:0000240;1.87e-08;6!CL:0000311;1.87e-08;6!CL:0000079;1.87e-08;6!CL:0000237;1.87e-08;6!CL:0002541;1.97e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.39e-22,4;CL:0000731,2.39e-22,4;CL:0000349,3.76e-22,19;CL:0002621,9.70e-18,3;CL:0002577,5.11e-17,3;CL:0000066,8.27e-16,253;CL:0002159,1.73e-13,14;CL:0002076,1.85e-13,42;CL:0002536,1.15e-12,2;CL:0002368,4.94e-10,13;CL:0000223,3.52e-09,58;CL:0002166,1.46e-08,3;CL:0000240,1.80e-08,6;CL:0000311,1.80e-08,6;CL:0000079,1.80e-08,6;CL:0000237,1.80e-08,6;CL:0000036,1.80e-08,6;CL:0000357,1.80e-08,6;CL:0000114,1.80e-08,6;CL:0002541,1.97e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000357;1.87e-08;6!CL:0000114;1.87e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.54e-28!14;UBERON:0000158!8.54e-28!14;UBERON:0003124!2.13e-17!7;UBERON:0000365!3.36e-17!5;UBERON:0000478!3.64e-15!24;UBERON:0005910!2.81e-14!6;UBERON:0001987!5.72e-14!4;UBERON:0004340!5.72e-14!4;UBERON:0000305!2.67e-12!7;UBERON:0001949!1.38e-11!3;UBERON:0004871!1.03e-10!8;UBERON:0004815!3.32e-10!3;UBERON:0002031!3.32e-10!3;UBERON:0004119!4.83e-10!169;UBERON:0000925!4.83e-10!169;UBERON:0006595!4.83e-10!169;UBERON:0001708!1.85e-08!4;UBERON:0001704!1.85e-08!4;UBERON:0004923!2.06e-08!57;UBERON:0005911!8.69e-08!82;UBERON:0002185!9.28e-08!4;UBERON:0001004!7.74e-07!72 | |ontology_enrichment_uberon=UBERON:0005631!8.54e-28!14;UBERON:0000158!8.54e-28!14;UBERON:0003124!2.13e-17!7;UBERON:0000365!3.36e-17!5;UBERON:0000478!3.64e-15!24;UBERON:0005910!2.81e-14!6;UBERON:0001987!5.72e-14!4;UBERON:0004340!5.72e-14!4;UBERON:0000305!2.67e-12!7;UBERON:0001949!1.38e-11!3;UBERON:0004871!1.03e-10!8;UBERON:0004815!3.32e-10!3;UBERON:0002031!3.32e-10!3;UBERON:0004119!4.83e-10!169;UBERON:0000925!4.83e-10!169;UBERON:0006595!4.83e-10!169;UBERON:0001708!1.85e-08!4;UBERON:0001704!1.85e-08!4;UBERON:0004923!2.06e-08!57;UBERON:0005911!8.69e-08!82;UBERON:0002185!9.28e-08!4;UBERON:0001004!7.74e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;5.79e-22;12!UBERON:0005631;1.13e-19;10!UBERON:0000158;1.13e-19;10!UBERON:0000365;6.25e-18;5!UBERON:0001949;1.11e-17;3!UBERON:0000478;3.07e-17;24!UBERON:0005910;5.70e-15;6!UBERON:0000305;4.93e-13;7!UBERON:0001987;5.82e-13;4!UBERON:0005911;2.17e-10;36!UBERON:0004807;1.77e-08;22!UBERON:0003124;1.97e-08;3!UBERON:0000920;1.97e-08;3!UBERON:0003929;7.65e-08;7!UBERON:0004923;3.63e-07;55!UBERON:0003729;5.21e-07;13!UBERON:0003350;6.53e-07;8!UBERON:0001828;6.53e-07;8!UBERON:0004913;7.18e-07;1!UBERON:0003703;7.18e-07;1!UBERON:0001174;7.18e-07;1!UBERON:0004914;7.18e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.33e-30,14;UBERON:0000158,1.33e-30,14;UBERON:0003124,1.42e-19,7;UBERON:0000365,6.41e-18,5;UBERON:0001949,9.70e-18,3;UBERON:0000478,3.23e-17,24;UBERON:0005910,5.82e-15,6;UBERON:0000305,4.79e-13,7;UBERON:0001987,6.73e-13,4;UBERON:0004340,6.73e-13,4;UBERON:0004923,1.63e-11,66;UBERON:0004871,1.98e-11,8;UBERON:0004119,4.14e-09,160;UBERON:0000925,4.14e-09,160;UBERON:0006595,4.14e-09,160;UBERON:0000920,1.97e-08,3;UBERON:0005911,2.80e-07,82;UBERON:0003729,4.97e-07,13;UBERON:0003350,6.22e-07,8;UBERON:0001828,6.22e-07,8;UBERON:0004913,6.24e-07,1;UBERON:0003703,6.24e-07,1;UBERON:0001174,6.24e-07,1;UBERON:0004914,6.24e-07,1 | |||
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| ||
|short_description=p8@COL17A1 | |short_description=p8@COL17A1 | ||
}} | }} |
Latest revision as of 05:05, 16 September 2015
Short description: | p8@COL17A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_COL17A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -385bp_to_ENST00000353479, ENST00000369733_5end |
EntrezGene: | COL17A1 |
HGNC: | 2194 |
UniProt: | Q9UMD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.39e-22 | 4 |
urothelial cell | 2.39e-22 | 4 |
extraembryonic cell | 3.76e-22 | 19 |
gingival epithelial cell | 9.70e-18 | 3 |
placental epithelial cell | 5.11e-17 | 3 |
epithelial cell | 8.27e-16 | 253 |
general ecto-epithelial cell | 1.73e-13 | 14 |
endo-epithelial cell | 1.85e-13 | 42 |
amniotic epithelial cell | 1.15e-12 | 2 |
respiratory epithelial cell | 4.94e-10 | 13 |
endodermal cell | 3.52e-09 | 58 |
epithelial cell of Malassez | 1.46e-08 | 3 |
stratified squamous epithelial cell | 1.80e-08 | 6 |
keratin accumulating cell | 1.80e-08 | 6 |
stratified epithelial cell | 1.80e-08 | 6 |
keratinizing barrier epithelial cell | 1.80e-08 | 6 |
epithelial fate stem cell | 1.80e-08 | 6 |
stratified epithelial stem cell | 1.80e-08 | 6 |
surface ectodermal cell | 1.80e-08 | 6 |
chorionic membrane mesenchymal stem cell | 1.97e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.33e-30 | 14 |
membranous layer | 1.33e-30 | 14 |
chorion | 1.42e-19 | 7 |
urothelium | 6.41e-18 | 5 |
gingival epithelium | 9.70e-18 | 3 |
extraembryonic structure | 3.23e-17 | 24 |
transitional epithelium | 5.82e-15 | 6 |
amnion | 4.79e-13 | 7 |
placenta | 6.73e-13 | 4 |
allantois | 6.73e-13 | 4 |
organ component layer | 1.63e-11 | 66 |
somatic layer of lateral plate mesoderm | 1.98e-11 | 8 |
endoderm-derived structure | 4.14e-09 | 160 |
endoderm | 4.14e-09 | 160 |
presumptive endoderm | 4.14e-09 | 160 |
egg chorion | 1.97e-08 | 3 |
endo-epithelium | 2.80e-07 | 82 |
mouth mucosa | 4.97e-07 | 13 |
epithelium of mucosa | 6.22e-07 | 8 |
gingiva | 6.22e-07 | 8 |
hepatopancreatic ampulla | 6.24e-07 | 1 |
extrahepatic bile duct | 6.24e-07 | 1 |
common bile duct | 6.24e-07 | 1 |
duodenal papilla | 6.24e-07 | 1 |