FFCP PHASE1:Hg19::chr10:110305658..110305707,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:110305658..110305707,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr10:110305658..110305707,- | |description=CAGE_peak_at_chr10:110305658..110305707,- | ||
|id=chr10:110305658..110305707,- | |id=chr10:110305658..110305707,- | ||
|ontology_enrichment_celltype=CL:0002573!4.82e-11!2;CL:0000243!1.24e-10!15;CL:0000125!1.24e-10!15;CL:0000030!1.24e-10!15;CL:0000339!1.24e-10!15;CL:0000095!1.72e-09!17;CL:0000123!1.72e-09!17;CL:0000946!2.46e-08!1;CL:0000786!2.46e-08!1;CL:0000980!2.46e-08!1 | |ontology_enrichment_celltype=CL:0002573!4.82e-11!2;CL:0000243!1.24e-10!15;CL:0000125!1.24e-10!15;CL:0000030!1.24e-10!15;CL:0000339!1.24e-10!15;CL:0000095!1.72e-09!17;CL:0000123!1.72e-09!17;CL:0000946!2.46e-08!1;CL:0000786!2.46e-08!1;CL:0000980!2.46e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002573;3.66e-23;2!CL:0000243;1.22e-16;15!CL:0000125;1.22e-16;15!CL:0000095;5.09e-15;17!CL:0002319;6.40e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,3.27e-23,2;CL:0000243,1.17e-16,15;CL:0000125,1.17e-16,15;CL:0000030,1.17e-16,15;CL:0000339,1.17e-16,15;CL:0000095,4.91e-15,17;CL:0000123,4.91e-15,17;CL:0002319,6.25e-11,25;CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.34e-66;1!UBERON:0003056;3.66e-23;3!CL:0000339;1.22e-16;15!UBERON:0006238;2.32e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;7.48e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000941!6.50e-09!1;UBERON:0004904!6.50e-09!1;UBERON:0002464!6.50e-09!1;UBERON:0001021!6.50e-09!1;UBERON:0001785!6.50e-09!1;UBERON:0002146!1.02e-08!1;UBERON:0005623!1.02e-08!1;UBERON:0000010!4.31e-08!8;UBERON:0002118!7.49e-07!5;UBERON:0004532!7.49e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.34e-66;1!UBERON:0001785;3.34e-66;1!UBERON:0002464;3.34e-66;1!UBERON:0004904;3.34e-66;1!UBERON:0001021;3.34e-66;1!UBERON:0003714;5.96e-34;2!UBERON:0005162;5.96e-34;2!UBERON:0000122;5.96e-34;2!UBERON:0000010;3.59e-30;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.66e-66,1;UBERON:0001785,4.66e-66,1;UBERON:0002464,4.66e-66,1;UBERON:0004904,4.66e-66,1;UBERON:0001021,4.66e-66,1;UBERON:0003902,4.66e-66,1;UBERON:0005425,4.66e-66,1;UBERON:0003714,7.05e-34,2;UBERON:0005162,7.05e-34,2;UBERON:0000122,7.05e-34,2;UBERON:0000010,3.59e-30,8;UBERON:0001781,1.03e-17,4;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p@chr10:110305658..110305707,- | |short_description=p@chr10:110305658..110305707,- | ||
}} | }} |
Latest revision as of 10:14, 23 July 2015
Short description: | p@chr10:110305658..110305707, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:110305658..110305707, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 3.27e-23 | 2 |
glial cell (sensu Vertebrata) | 1.17e-16 | 15 |
glial cell | 1.17e-16 | 15 |
glioblast | 1.17e-16 | 15 |
glioblast (sensu Vertebrata) | 1.17e-16 | 15 |
neuron associated cell | 4.91e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 4.91e-15 | 17 |
neural cell | 6.25e-11 | 25 |
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.66e-66 | 1 |
cranial nerve | 4.66e-66 | 1 |
nerve trunk | 4.66e-66 | 1 |
nerve connecting eye with brain | 4.66e-66 | 1 |
nerve | 4.66e-66 | 1 |
retinal neural layer | 4.66e-66 | 1 |
presumptive neural retina | 4.66e-66 | 1 |
neural tissue | 7.05e-34 | 2 |
multi cell component structure | 7.05e-34 | 2 |
neuron projection bundle | 7.05e-34 | 2 |
peripheral nervous system | 3.59e-30 | 8 |
layer of retina | 1.03e-17 | 4 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 7.48e-07 | 11 |