FFCP PHASE1:Hg19::chr13:96186143..96186158,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=39907 | |HGNC=39907 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000416909_5end | |association_with_transcript=5bp_to_ENST00000416909_5end | ||
|cluster_id=chr13:96186143..96186158,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_1_at_CLDN10-AS1_5end | |description=CAGE_peak_1_at_CLDN10-AS1_5end | ||
|id=chr13:96186143..96186158,- | |id=chr13:96186143..96186158,- | ||
|ontology_enrichment_celltype=CL:0002543!6.24e-11!6;CL:0002618!1.23e-08!3 | |ontology_enrichment_celltype=CL:0002543!6.24e-11!6;CL:0002618!1.23e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002543;7.32e-10;6!CL:0002618;3.69e-09;3!CL:0000167;5.22e-08;1!CL:0000164;5.22e-08;1!CL:0000502;5.22e-08;1!CL:0000172;5.22e-08;1!CL:0000173;5.22e-08;1!CL:0002379;8.28e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,6.28e-10,6;CL:0002618,3.26e-09,3;CL:0000167,5.22e-08,1;CL:0000164,5.22e-08,1;CL:0000502,5.22e-08,1;CL:0000172,5.22e-08,1;CL:0000173,5.22e-08,1;CL:0002351,5.22e-08,1;CL:0002379,8.84e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006298;4.57e-08;1!CL:0002351;5.22e-08;1!UBERON:0008801;8.28e-08;1!UBERON:0000358;1.30e-07;1!UBERON:0006242;2.31e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;5.22e-08;1!DOID:3620;8.28e-08;1!DOID:3565;8.28e-08;1!DOID:3347;2.31e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.22e-08,1;DOID:3620,8.84e-08,1;DOID:3565,8.84e-08,1;DOID:3347,2.31e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001638!7.08e-10!9;UBERON:0003920!7.08e-10!9;UBERON:0004582!7.08e-10!9;UBERON:0000466!1.29e-07!126;UBERON:0005177!1.62e-07!107;UBERON:0005172!3.81e-07!55;UBERON:0005173!3.81e-07!55;UBERON:0002113!8.41e-07!27;UBERON:0003918!8.41e-07!27;UBERON:0005095!8.41e-07!27;UBERON:0007687!8.41e-07!27;UBERON:0001829!8.85e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.50e-14;2!UBERON:0003127;4.69e-14;2!UBERON:0000341;2.71e-13;2!UBERON:0001044;1.58e-10;6!UBERON:0003293;1.58e-10;6!UBERON:0003294;1.58e-10;6!UBERON:0010047;1.58e-10;6!UBERON:0003408;1.58e-10;6!UBERON:0000167;1.58e-10;6!UBERON:0001736;4.57e-08;1!UBERON:0001831;8.28e-08;1!UBERON:0001567;8.28e-08;1!UBERON:0001041;1.09e-07;14!UBERON:0002372;2.31e-07;1!UBERON:0000029;2.31e-07;1!UBERON:0001961;2.31e-07;1!UBERON:0001744;2.31e-07;1!UBERON:0001042;2.31e-07;1!UBERON:0001735;2.31e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.88e-14,2;UBERON:0003127,4.54e-14,2;UBERON:0000341,3.48e-13,2;UBERON:0001044,1.44e-10,6;UBERON:0003293,1.44e-10,6;UBERON:0003294,1.44e-10,6;UBERON:0010047,1.44e-10,6;UBERON:0000167,1.44e-10,6;UBERON:0001736,4.57e-08,1;UBERON:0006298,4.57e-08,1;UBERON:0001831,6.80e-08,1;UBERON:0001567,6.80e-08,1;UBERON:0008801,6.80e-08,1;UBERON:0000029,1.69e-07,1;UBERON:0002372,1.80e-07,1;UBERON:0001961,1.80e-07,1;UBERON:0001744,1.80e-07,1;UBERON:0001735,1.80e-07,1;UBERON:0001638,9.08e-07,9;UBERON:0003920,9.08e-07,9;UBERON:0004582,9.08e-07,9 | |||
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| ||
|short_description=p1@CLDN10-AS1 | |short_description=p1@CLDN10-AS1 | ||
}} | }} |
Latest revision as of 06:01, 18 September 2015
Short description: | p1@CLDN10-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDN10-AS1_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 5bp_to_ENST00000416909_5end |
EntrezGene: | NA |
HGNC: | 39907 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 6.28e-10 | 6 |
endothelial cell of umbilical vein | 3.26e-09 | 3 |
peptide hormone secreting cell | 5.22e-08 | 1 |
enteroendocrine cell | 5.22e-08 | 1 |
type D enteroendocrine cell | 5.22e-08 | 1 |
somatostatin secreting cell | 5.22e-08 | 1 |
pancreatic D cell | 5.22e-08 | 1 |
progenitor cell of endocrine pancreas | 5.22e-08 | 1 |
meningothelial cell | 8.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.88e-14 | 2 |
open tracheal system trachea | 4.54e-14 | 2 |
throat | 3.48e-13 | 2 |
saliva-secreting gland | 1.44e-10 | 6 |
gland of oral region | 1.44e-10 | 6 |
gland of foregut | 1.44e-10 | 6 |
oral gland | 1.44e-10 | 6 |
oral cavity | 1.44e-10 | 6 |
submandibular gland | 4.57e-08 | 1 |
submandibular gland primordium | 4.57e-08 | 1 |
parotid gland | 6.80e-08 | 1 |
cheek | 6.80e-08 | 1 |
parotid gland primordium | 6.80e-08 | 1 |
lymph node | 1.69e-07 | 1 |
tonsil | 1.80e-07 | 1 |
mucosa-associated lymphoid tissue | 1.80e-07 | 1 |
lymphoid tissue | 1.80e-07 | 1 |
tonsillar ring | 1.80e-07 | 1 |
vein | 9.08e-07 | 9 |
venous blood vessel | 9.08e-07 | 9 |
venous system | 9.08e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.22e-08 | 1 |
central nervous system cancer | 8.84e-08 | 1 |
meningioma | 8.84e-08 | 1 |
osteosarcoma | 2.31e-07 | 1 |