FFCP PHASE1:Mm9::chr5:129620873..129620889,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1438 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:129620873..129620889,+ | |||
|description=CAGE_peak_at_chr5:129620873..129620889,+ | |description=CAGE_peak_at_chr5:129620873..129620889,+ | ||
|id=chr5:129620873..129620889,+ | |id=chr5:129620873..129620889,+ | ||
|ontology_enrichment_celltype=CL:0002563!6.23e-26!9;CL:0002251!6.23e-26!9;CL:0000075!1.19e-20!7;CL:0000239!1.95e-18!6;CL:0000677!1.95e-18!6;CL:0000212!1.95e-18!6;CL:0000584!1.95e-18!6;CL:0000066!8.61e-18!25;CL:0002076!6.84e-15!15;CL:0000223!9.45e-11!20;CL:0000473!4.44e-10!3;CL:0000627!4.44e-10!3;CL:0000682!4.44e-10!3;CL:0002250!4.47e-09!3 | |ontology_enrichment_celltype=CL:0002563!6.23e-26!9;CL:0002251!6.23e-26!9;CL:0000075!1.19e-20!7;CL:0000239!1.95e-18!6;CL:0000677!1.95e-18!6;CL:0000212!1.95e-18!6;CL:0000584!1.95e-18!6;CL:0000066!8.61e-18!25;CL:0002076!6.84e-15!15;CL:0000223!9.45e-11!20;CL:0000473!4.44e-10!3;CL:0000627!4.44e-10!3;CL:0000682!4.44e-10!3;CL:0002250!4.47e-09!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.61e-36,6;CL:0000677,1.61e-36,6;CL:0000584,1.61e-36,6;CL:0000075,2.37e-31,7;CL:0000682,8.55e-27,3;CL:0002563,1.89e-24,9;CL:0002251,1.89e-24,9;CL:0000066,4.78e-22,25;CL:0002076,9.40e-15,15;CL:0000473,6.80e-12,7;CL:0000223,4.26e-11,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.51e-27!15;UBERON:0003350!6.23e-26!9;UBERON:0004808!6.23e-26!9;UBERON:0001277!6.23e-26!9;UBERON:0000485!1.90e-25!11;UBERON:0001242!1.71e-21!13;UBERON:0000060!1.71e-21!13;UBERON:0001262!1.71e-21!13;UBERON:0004786!1.71e-21!13;UBERON:0004923!6.72e-16!24;UBERON:0000160!1.49e-10!43;UBERON:0001962!2.39e-07!2;UBERON:0001961!2.39e-07!2;UBERON:0001744!2.39e-07!2;UBERON:0005409!6.76e-07!59 | |ontology_enrichment_uberon=UBERON:0000344!5.51e-27!15;UBERON:0003350!6.23e-26!9;UBERON:0004808!6.23e-26!9;UBERON:0001277!6.23e-26!9;UBERON:0000485!1.90e-25!11;UBERON:0001242!1.71e-21!13;UBERON:0000060!1.71e-21!13;UBERON:0001262!1.71e-21!13;UBERON:0004786!1.71e-21!13;UBERON:0004923!6.72e-16!24;UBERON:0000160!1.49e-10!43;UBERON:0001962!2.39e-07!2;UBERON:0001961!2.39e-07!2;UBERON:0001744!2.39e-07!2;UBERON:0005409!6.76e-07!59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.94e-28,15;UBERON:0003350,1.89e-24,9;UBERON:0004808,1.89e-24,9;UBERON:0001277,1.89e-24,9;UBERON:0000485,4.76e-20,11;UBERON:0001962,1.06e-18,2;UBERON:0001961,1.06e-18,2;UBERON:0001744,1.06e-18,2;UBERON:0004923,9.97e-18,24;UBERON:0001242,5.37e-17,13;UBERON:0001262,5.37e-17,13;UBERON:0004786,5.37e-17,13;UBERON:0002465,8.30e-13,3;UBERON:0003199,5.62e-10,1;UBERON:0000160,3.54e-07,31 | |||
|phase1_expression=0,1.39590163055744,4.54999239389536,0.90739263392049,2.00358291978539,7.55456723603504,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87967418011649,3.21172993494038,3.44539178469012,2.15380998079537,5.17130958446134,0,0,0.443461021310609,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,1.39590163055744,4.54999239389536,0.90739263392049,2.00358291978539,7.55456723603504,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87967418011649,3.21172993494038,3.44539178469012,2.15380998079537,5.17130958446134,0,0,0.443461021310609,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr5:129620873..129620889,+ | |short_description=p@chr5:129620873..129620889,+ | ||
}} | }} |
Latest revision as of 08:36, 6 August 2015
Short description: | p@chr5:129620873..129620889, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:129620873..129620889, + |
Coexpression cluster: | MCL_coexpression_mm9:1438 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.61e-36 | 6 |
gut absorptive cell | 1.61e-36 | 6 |
enterocyte | 1.61e-36 | 6 |
columnar/cuboidal epithelial cell | 2.37e-31 | 7 |
M cell of gut | 8.55e-27 | 3 |
intestinal epithelial cell | 1.89e-24 | 9 |
epithelial cell of alimentary canal | 1.89e-24 | 9 |
epithelial cell | 4.78e-22 | 25 |
endo-epithelial cell | 9.40e-15 | 15 |
defensive cell | 6.80e-12 | 7 |
endodermal cell | 4.26e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.94e-28 | 15 |
epithelium of mucosa | 1.89e-24 | 9 |
gastrointestinal system epithelium | 1.89e-24 | 9 |
intestinal epithelium | 1.89e-24 | 9 |
simple columnar epithelium | 4.76e-20 | 11 |
gut-associated lymphoid tissue | 1.06e-18 | 2 |
mucosa-associated lymphoid tissue | 1.06e-18 | 2 |
lymphoid tissue | 1.06e-18 | 2 |
organ component layer | 9.97e-18 | 24 |
intestinal mucosa | 5.37e-17 | 13 |
wall of intestine | 5.37e-17 | 13 |
gastrointestinal system mucosa | 5.37e-17 | 13 |
lymphoid system | 8.30e-13 | 3 |
egg chamber | 5.62e-10 | 1 |
intestine | 3.54e-07 | 31 |